Os02g0708100

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0708100| Description = Similar to Carbamoyl phosphate synthetase small subunit (EC 6.3.5.5)| Version = NM_001054415.1 GI:115448200 GeneID:43...")
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Gene Name

Os02g0708100

Description

Similar to Carbamoyl phosphate synthetase small subunit (EC 6.3.5.5)

Version

NM_001054415.1 GI:115448200 GeneID:4330474

Length

4263 bp

Definition

Oryza sativa Japonica Group Os02g0708100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30156975..30161237

Sequence Coding Region

30157074..30157232,30157482..30157524,30157692..30157818,30157983..30158071,30158162..30158222
,30158312..30158379,30158467..30158595,30159388..30159494,30159578..30159925
,30160171..30160272

Expression

GEO Profiles:Os02g0708100

Genome Context

<gbrowseImage1> name=NC_008395:30156975..30161237 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30156975..30161237 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgcctccggccacggcctccgcgccctccctgcgcccgtccgcggccagcccacgcgccgccgccgctcggtcggtcgccgtcccctcagggcctcgcaccgtcggcccgaggcgagacgggggccgcttcctcggcgtccgtgctgccaaggctgtcagtggcgtgcagagtggtaccgtggtggatgatggagtgcaaagaccatggaagctcagcgatgctcggctcgttcttgaggatggttcagtttggaaggccaagtcttttggtgcttcaggaacacaagttggtgaagtggtatttaatacatctttgacagggtatcaagagattttgactgatccaagctatgctggtcaatttgtcctcatgaccaacccacatattggaaacactggtgttaatcctgatgatgaagaatcgaaccgatgtttccttgctggtctgatcataaggaatctaagcatatgtacatccaactggcgatgcacagaaacacttgaagagtatctgatgaagagaaacattatgggaatatatgatgtggacacacgcgccataacacggagattacgagaagatggtagtctaattggtgtcttaagtactgatcaatctcggaccgatgatgagttgttggaaatggcaaaaaattggaaaattgttggtgttgatttgattagtggtgtcacatgcgatgctccatatgaatggtcagacaagactgattcagagtgggaattcaagaagggtcaatcgactgaaagttttcatgtggtcgcatacgattttggaatcaagcacaatattttgagacgtttgacgtcatatggatgcaagataactgttgttccagccaattggcctgcttctgaggtacttaacttgaagcctgatggtgtgttttttagcaatggtcctggagatccagctgcagttccatatgctgtgaagacagtacaagaaataatagggaaggttcctgtgtttggcatctgtatgggccaccaattgattgggcaagctcttggtgggaagacatttaaaatgaagtttggtcatcatggaggaaatcatcctgtttgtgaccttcgaagtggacgtgtcgacataagtgcacaagctttccgtattactggtgttgggagaggtgctggacttctcgctgtgacacttcctgatgaaaacttggagcttctgagagtaatgaatttgaacctttag</cdnaseq>

Protein Sequence

<aaseq>MAAPPATASAPSLRPSAASPRAAAARSVAVPSGPRTVGPRRDGG RFLGVRAAKAVSGVQSGTVVDDGVQRPWKLSDARLVLEDGSVWKAKSFGASGTQVGEV VFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNPDDEESNRCFLAGLIIRNLSIC TSNWRCTETLEEYLMKRNIMGIYDVDTRAITRRLREDGSLIGVLSTDQSRTDDELLEM AKNWKIVGVDLISGVTCDAPYEWSDKTDSEWEFKKGQSTESFHVVAYDFGIKHNILRR LTSYGCKITVVPANWPASEVLNLKPDGVFFSNGPGDPAAVPYAVKTVQEIIGKVPVFG ICMGHQLIGQALGGKTFKMKFGHHGGNHPVCDLRSGRVDISAQAFRITGVGRGAGLLA VTLPDENLELLRVMNLNL</aaseq>

Gene Sequence

<dnaseqindica>100..258#508..550#718..844#1009..1097#1188..1248#1338..1405#1493..1621#2414..2520#2604..2951#3197..3298#aaaccctaacaacaaggcaaggcggcgccgattgctccctccggctaccaagcagcagcgagctcagtgaacccctaccgctgccgcaccctaccaccaatggcggcgcctccggccacggcctccgcgccctccctgcgcccgtccgcggccagcccacgcgccgccgccgctcggtcggtcgccgtcccctcagggcctcgcaccgtcggcccgaggcgagacgggggccgcttcctcggcgtccgtgctgccaaggtgagcgcgagtggattgctcctgctgctttagcttcgccggcggggccttgttacctacctatcgtttgggaggagtgtactgattggtatatctggcttttgtgctttcccgtgaagccttcgccatagttttagtcccgttgtattgcaagactgaatccgtcatacaccatcaacagcttcgtctgtcgatggttgttttatccgcgcgaaaattgagttgttttgtgttgtcttccgtgtgcaggctgtcagtggcgtgcagagtggtaccgtggtggatgatggaggtgagtcaggttgccttttcgctagctgattcgaatcgctctagttttgcagtcgcagcgcggaatacgtgctcagggttctgctacggatttgcgattaggcaattgtgctccacagttaagaagatgatgaatactgtttcaccatttttggattcttcgtgcagtgcaaagaccatggaagctcagcgatgctcggctcgttcttgaggatggttcagtttggaaggccaagtcttttggtgcttcaggaacacaagttggtgaagtggtatttaatacatctttgacagggtaaatcaactaaccgtttgagtgatggcatttgtttcctgttgtggttgagatgtgcttattgttcttcctgatagagaaacaactaacctcatcaaatagttgagacgcgcgtactgcttattgacaacaggaaacaactaacctcatcaaatgggctgcaggtatcaagagattttgactgatccaagctatgctggtcaatttgtcctcatgaccaacccacatattggaaacactggtgttaatcctggtccgtatcttttctattagtcaataatcatgatatgatgccatttccacaatagcttgtaagttttaacaaattagaatgctcatgcagatgatgaagaatcgaaccgatgtttccttgctggtctgatcataaggaatctaagcatatggtaaaccattttttcctagtattggttgacataattggaactttaagagaaccacctaatgttgttaaattggtattctttctctgtagtacatccaactggcgatgcacagaaacacttgaagagtatctgatgaagagaaacattatgggaatatgtaagtattgtcacctgatacattgctctctatgtccgacaaacaacaaaagcaacaataaacaccatcaatttgctttatatgcagatgatgtggacacacgcgccataacacggagattacgagaagatggtagtctaattggtgtcttaagtactgatcaatctcggaccgatgatgagttgttggaaatggcaaaaaattggaaaattgttggtatgctatgctctcttcaagcagtaatgtccttgaataattgtctgtctcctttaataaatataattgcactttgcatggtagattgtaacatgtttctctttacgccaggtttagcacatatttctatttacaccaggtgcatcgaaataagtttcgcttaacaccaggatacatcatcaaacatatagaaatttcatgaaatctaaatgaaacttcatgaaacatggtctaaattaaaaaaaaaacgttttgataagatttgacaagatttcccttcagttatatgaagcaacctagtgcaaaatgaaacttattcgatctactctggtttaaagtgaaagtgtgtgctgaactcagtgcaaagtgataattctacctggtgaacagtgcaatttactcttaagtcttaaaaaataattaattaccttgcaaacatgatagtactaggcttaatgaaattaacgtggactatttattatttaaccgcgtactggttcaggaatattattatgttttgctggtcaagcagattgttaactcgattgaagtttcatatgtttatgacatggacacatggttatgatgcttgctatccttcactgatctattagagtaactatctggagtatttttcatgtccactttatgatgaatattgtgtcaccagcattgacatgtaatgatatcatttagaatagtgtattggcaaaattgattgcctccatccatatttagacactattcaagttactggttataaaacaagatctggtatttcatgttatgcaggtgttgatttgattagtggtgtcacatgcgatgctccatatgaatggtcagacaagactgattcagagtgggaattcaagaagggtcaatcgactgaaagttttcatgtcagtgttggtttggtccctttctcttttttgaaacacttcagatgaatctcatatctaaacattagcttccttttatttaggtggtcgcatacgattttggaatcaagcacaatattttgagacgtttgacgtcatatggatgcaagataactgttgttccagccaattggcctgcttctgaggtacttaacttgaagcctgatggtgtgttttttagcaatggtcctggagatccagctgcagttccatatgctgtgaagacagtacaagaaataatagggaaggttcctgtgtttggcatctgtatgggccaccaattgattgggcaagctcttggtgggaagacatttaaaatgaagtttggtcatcatggaggaaatcatcctgtttgtgaccttcgaagtggacgtgtcgacataagtgcacaagtttgttcctgacctgacttcttactgttttgatactgaatgcgattcatgttttttgactctcgagggaaatagccttccgtttgaatttcagtacaataaactgttttgtctaactagaggtatagaaacttgttgtaggattgctgttttaagtttttaagtctagaaaccattgatatccattatagttcttttctgttacgtattgatttatagatctatcctatgttatttcctgaaaggctttccgtattactggtgttgggagaggtgctggacttctcgctgtgacacttcctgatgaaaacttggagcttctgagagtaatgaatttgaacctttaggctgttaggtatatccaatttaatcaactactccctccgtttcacaatgtaagtcatcctagcatttcccatattcatattgatgttaatgaatctagtcacatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtagcaagtctatccttctagactaaaatcatatacaccaaatcagctgagagtcaggtagtattgtttgtaactctgtattattagaagttgtttttccaccaagagaaatgtgtgcatccttgctattttccttttatttaattcatatttctgagtcttagctattttcccctttgttttacttgtcatacttgcatttactactgtgcaatctgcaattgtcttaccgtatttttctctgcagaaccataattatgctgttgacccagagtcacttccagaaggggtgaaagtaacacatatcaatctcaacgataatagctgtgccggccttcagtaccctaagatgaaacttttgtctcttcagtaccatccagagtcctcacccgggccgcatgattctgacttgggtacatttccttgaacaatatagtacttctagagaaaagtgttgtaccaacacaacttgtgttatcactgttaagtgttgattttactaatcctgtttcttgtgctttacagcttttggtgaatttatagagatgatgaagaacaacagattgtgaggcgcaaatataagatacaagggtttggttcttgaaccgggaggtgagaggttctatttcagatttctgatgagagccacaagagtcaaaataatctgttgtacctgtagcttttctttccttattataagctccgacaagcttgaatgcgagggtcaaggactcgagaataagttgctttgtgactgaatcagcctatgcaaaaatattttactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0708100, RefSeq:Os02g0708100