Os02g0709200

From RiceWiki
Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0709200| Description = Similar to Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate trans...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0709200

Description

Similar to Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)

Version

NM_001054423.1 GI:115448216 GeneID:4330482

Length

3599 bp

Definition

Oryza sativa Japonica Group Os02g0709200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30211635..30215233

Sequence Coding Region

30211916..30212050,30212629..30212769,30212864..30213006,30213372..30213529,30213629..30213737
,30213874..30213971,30214094..30214248,30214568..30214651,30214909..30215163

Expression

GEO Profiles:Os02g0709200

Genome Context

<gbrowseImage1> name=NC_008395:30211635..30215233 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30211635..30215233 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcagcgtccgagctcgcatccagagcccgcaccggtcggccgcccacttcgtcgccggcgaggggggacgccgccgcccggcaacgtccagggtatccttccgctccatggcgtcggccgcttccgtggaggagcctgccgctgctgcggcggcggcggctgagacgaagaggggaccgagcggcgcctccttcatccgggaacacctcaggagtctcgccccgtaccagcccatcctgcccttcgaggtgttgtccgctcggcttgggcgtaaaccagaggatataatcaagttggatgcaaatgaaaatccatatggtccacctccggaggtagctaaagcattaggaaatttgaagtttccctatgtgtaccctgatcctgaaagccgtcagttgcgtgctgctcttgctgaagattctggtcttgaatctgagtacatacttgctggatgtggtgcagatgaattaattgatttaataatgagatgtgtactcgaaccaggtgacaaaattgttgattgccctccaacttttacgatgtatgagtttgatgcgtcagtcaatggtgcacttgtgatcaaggtaccgagacttcctgatttttctctagacgttgcacagattgtcaaagtggttgaacaggaaaagccaaaatccatatttctgacatctccgaacaacccagatggcagcataatcaatgatgaggatcttttaaagatccttgatcttccaatacttgtagtgctggatgaagcatatattgagttttcgagtcttcaaacaaggatgtcatgggttaagaagcatgataatttgattgttcttcggacatttagcaaacgagcaggtttagctggacttcgtgtgggttacggagcatttcctctaagcataatcgagtatttatggagggctaagcagccctataatgtttctgtagcagcagaagtttcagcctgtgctgccttgcagaacccgacttatttagaggaagtgaaaaatctgctactacaagagagggacaggctgtacgatcttctcaaagaaataccattcctaaagccatttcccagccactctaactttattctctgcgaggtcacatcaggcaaagatgcaaagaaaataaaggaagaccttgcgaagatgggagtaatgatccgccactatgacaagaaggaactaaagggatatattcgtatttcagtgggcaagccagagcataccgatgcactaatgaaaggcctgaaagcacttcaactgtga</cdnaseq>

Protein Sequence

<aaseq>MDFSVRARIQSPHRSAAHFVAGEGGRRRPATSRVSFRSMASAAS VEEPAAAAAAAAETKRGPSGASFIREHLRSLAPYQPILPFEVLSARLGRKPEDIIKLD ANENPYGPPPEVAKALGNLKFPYVYPDPESRQLRAALAEDSGLESEYILAGCGADELI DLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVPRLPDFSLDVAQIVKVVEQE KPKSIFLTSPNNPDGSIINDEDLLKILDLPILVVLDEAYIEFSSLQTRMSWVKKHDNL IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPTYLE EVKNLLLQERDRLYDLLKEIPFLKPFPSHSNFILCEVTSGKDAKKIKEDLAKMGVMIR HYDKKELKGYIRISVGKPEHTDALMKGLKALQL</aaseq>

Gene Sequence

<dnaseqindica>3184..3318#2465..2605#2228..2370#1705..1862#1497..1605#1263..1360#986..1140#583..666#71..325#ggccctccgtggtgacacgagccgtggccacctgaaaaacacactccgcccgcgccgcacctcctcgttgatggatttcagcgtccgagctcgcatccagagcccgcaccggtcggccgcccacttcgtcgccggcgaggggggacgccgccgcccggcaacgtccagggtatccttccgctccatggcgtcggccgcttccgtggaggagcctgccgctgctgcggcggcggcggctgagacgaagaggggaccgagcggcgcctccttcatccgggaacacctcaggagtctcgccccgtaccagcccatcctgcccttcgaggtaggagcagcactctttcccactggtggttgagtttgtggagaacgctgcaccgtttcccgtgccgcgcgaggtgtttgtggaaattcccccgaggcccccgaggctgtttggttctgtattgtgaaagacagcagtaaagcttagattactgagcttatataggagtagtattaccaagcttactgttggttttgtgatgcgccacttttatagtggttttgctgttatctgaaatttagaactctccttgctaggtgttgtccgctcggcttgggcgtaaaccagaggatataatcaagttggatgcaaatgaaaatccatatggtccacctccggaggtgagtttcttgtaatacccaaacaagagtagcatctacctctaatacttgaaacaatacattcttaagaaacagtagtttgaccatgtcaacatgaaccatgtgttataagaaattaagaatgaatcctaataattcaaattcaaaatagtactagcatattataaatcaattcaaagtggcatattagaaacactagctatctttgaacttccaacagaaaatttaacagatctttgtatgagcatacgaagggctggattctcattgtacataatttataccttctctccatctaatgcatatctcttttatacaggtagctaaagcattaggaaatttgaagtttccctatgtgtaccctgatcctgaaagccgtcagttgcgtgctgctcttgctgaagattctggtcttgaatctgagtacatacttgctggatgtggtgcagatgaattaattgatttaataatgaggttagcatgtagcttgttttatacctgctttttgcacgagatttttgtatccgagttgagtaatagcctagttttttttttaataaaaaagtaatagcctagtttgaatggtgaaaatgcagatgtgtactcgaaccaggtgacaaaattgttgattgccctccaacttttacgatgtatgagtttgatgcgtcagtcaatggtgcacttgtgatcaagggtaggtagttctttcttgagctgtacttctatttactgagccttctgtaatgtcttaattcggtgttcacttcttatactgtttgacatgccagttaccaccctctaatgtaatcctgatttgaactcttatgtagtaccgagacttcctgatttttctctagacgttgcacagattgtcaaagtggttgaacaggaaaagccaaaatccatatttctgacatctccgaacaacccagatggcaggtacacctttctcatgcgagaatggggctgttttggttgtatgttgtccagattctgtatcttagtatttcgctgaattacctcaattctatttttcagcataatcaatgatgaggatcttttaaagatccttgatcttccaatacttgtagtgctggatgaagcatatattgagttttcgagtcttcaaacaaggatgtcatgggttaagaagcatgataatttgattgttcttcggacatttagcaaacgagcaggtctgtagtttctgtttgcctttttcttctctggtctgcaccgggctatatcctctgaaaaatccaaaaacctcacccgttttctcatagtactgcatggaaatcacttatctgtactagaatttctatttttcgttagataattttttttagtgctgctgcattattatgtgatgtccagacattgctaagggagcatttaataaaataatcaattcttcttatgttgccaactcattttactgaatcatgctaatttttagtagttactagcatggctttgtctagctgattcattgaaggcatttttgccacacaattatgaaccaaaaatgacacctcattacaaattattgataatgcaggtttagctggacttcgtgtgggttacggagcatttcctctaagcataatcgagtatttatggagggctaagcagccctataatgtttctgtagcagcagaagtttcagcctgtgctgccttgcagaacccgacttatttagaggtatgtgctctggaaacatatcataaataaatttttgtttagtaatttggcatctgctaactttgtgcttctgttgaacatttcattactgaaggaagtgaaaaatctgctactacaagagagggacaggctgtacgatcttctcaaagaaataccattcctaaagccatttcccagccactctaactttattctctgcgaggtcacatcaggcaaagatgcaaagaaaataaaggtttgcactgcttgttagtactccctccatttctttttgtttgaagttggttagtttgaaattgaactaaccaacatcatacgtttacagaggtagtatatgttactcccttcgtcccagaatagaaacatttttagcatagtgtcaagtcaaccattcttaattttgactattaatagcaaaaaaataaaaaaaagatcaataatgtaaaattgatgttgctagatttatcattgatcaaactatcataatatgtaactctttttatatttaaaacattttattttgatagatattattggttaaagtagcatctcgaagactgtgtcgagatccaaaaatgcttatattttgggatggagtacaagtttctgctgtattttgttgtggtacaatgtaataactgcttctgttgttatattcttaggtggtaaaatgtcaacctggaagtcaaaatatagttattgtgtctaagaccattactattcatactttgaaaggaaatgctgatgatttagtttcaacaatataatgcctgcagcatcattcacataattttgttcaaaaacaattttcaggaagaccttgcgaagatgggagtaatgatccgccactatgacaagaaggaactaaagggatatattcgtatttcagtgggcaagccagagcataccgatgcactaatgaaaggcctgaaagcacttcaactgtgatcatcccatctgtttgacggaagcactgaagcacttgcccgtggtagtgcactagatgcagtctctcaatggaggttgcatcaatctaacacaaataaggtgcatcctctagggtcgattatgtctcaataatacactcttctgttttgaccagtggcgttttgtccagcatttttgtgttggtcgacttgggtttcttctcaaggtgattgttcgaagcaagaatttgtactgccgtgccctgattggaataaatatgagcgtaaaagtatggcaagtct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0709200, RefSeq:Os02g0709200