Os02g0709900

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0709900| Description = Prefoldin domain containing protein| Version = NM_001054428.1 GI:115448226 GeneID:4330487| Length = 5549 bp| Defini...")
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Gene Name

Os02g0709900

Description

Prefoldin domain containing protein

Version

NM_001054428.1 GI:115448226 GeneID:4330487

Length

5549 bp

Definition

Oryza sativa Japonica Group Os02g0709900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30269323..30274871

Sequence Coding Region

30269563..30269772,30269940..30270123,30270234..30272341,30272688..30272771,30272875..30273145
,30273232..30273485,30273881..30274090,30274725..30274871

Expression

GEO Profiles:Os02g0709900

Genome Context

<gbrowseImage1> name=NC_008395:30269323..30274871 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30269323..30274871 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttactccgcaggggaaggggtggaccgggtggtcgacgccggctccggcgaaccagcggagcggtggcggcgctcccgccgcgtcggcgccccttggcaaggggaaagggactactctgcgggtcgccgaactggaacaagagttacatgaatatcagtacaatatggggctgcttttgattgagaaaaaagagtggacagccaaacttgatgaaatcaatcaagcgctgacacagaaagaagagattttaaagcgggaacaagctgcccatttgaatgccatatcagaatacgaaaggcgggaggaaagcatgcggaaagcattgggtgttgagaagcaatgcgtaacagatctcgaaaaggcactgcgtgaaattcgtggagagatagccgaggttaagtttatgtctgagaaaaagataactgatgctcaatcccttgaggctagtttggaggaaaaaaggttggagatcgagggtaagcttcatgctgcagatgcgaagcttgctgaggcaaaccgtaagaaatctcaggctgacagggatttagaggaggtagaagctcgtcagcgtaggctggagaaggagaagctatattttgaaaatgagaggaaggcaggggaggaccggatcaagcgtcaggaggattcattacgtgactgggacaaaaagcttaaggaaagtcagaatagaattcttgatttgcagagatccctaaatgatcgagaggagagagcaaacgagaatgacaaacttttcaagataaagcaagaagagttggaggaagcaaaaaaagctctggagcatactaaagctacactcaaaattaaagaggacgacattaacaaacgactagctgaattacatttacaagaaaaggaagctgaatcaaagaacaggaaattagaagaaagagagaaaaaaatagctgaaagggaagaaaaagtcagtgcaagggaaaaagttgggcttcagaagcttcttgaagatcataatgtgaagcttgaatccaaaagacgagattttgatttacaactggagaatgagaagaaatcatttgatgcaatgttggtacagaaggaagctgatttggtgcagagggaaaaagatgtcagatcttcggaggagaagctttcgaaaaaagaacaagtattaaatgaaagtaagaaaaaattggaagaatggcaaaatgatcttgatacaaaatcgaatgctctgaagaagtgggaggaatcactacaaaatgatgagaaacagttatcggaacaaaagctgcagattgaaaatgaaagaaagcaggctgagatgtacaaattggagcttgagagtttgaaagccacagtggttgctgaaaaggagaaaatattgcaagagcagaacaatttgaaacttacagaggaagagaggcaagagcacatcatgcttacagcacaactgaagaaagagattgatgaatacagaatgcgaagcaactctctttctgaggaaactgaagatttgaggaagcagcgtcagaaatttgaagaagagtgggagcagctggatgaaaaaagaactcacttggaagaggaagccaagaaactgaacaatgaaaagaagaatctagaaaggtggcatgacaatgaagaaaaaaggctaaaggatagagaggatgagttggacataaaatacaaggagcagggggaaaatctcgcacttaaggaaaaatccttgatcgataatatagaccatcagcgtttggaaaatgaggaattgctaaagagagagcgtgctgatcttcaacgaaatttgcagctccatcggcatgaattggagatggagatggagaaaaaacaagcgagcaaagagagagaacttgaagagaaggaaaatgagttaaataggaagatggactttgtagaaaatgagctcaaacgtgcagccgaattgaatgaatcaaagattcagaagatactattggagaaaaaacagctgcagaaggaaaaggaagttcttgtggaggataggcaaaaactggaaactgacaaggcagatatcagaagggacattgatagtctgaacactctcagcaagagtctgaaagagcgtagagaagcatataacagggacaggaataacctcatcgatatatttgaaaagtacaaggtgtgcaaaaattgcggggttattatttttgagggcttggatgccctagctcttaaagatagcactgatatagaatatcctagtcttgctgttgaggcggatgatcgttcccccaatcctgacaccttagcccaagagaccggagcacttgttaattcaggtggccgtttatcattgttgcagaagtgttcaaggattttcaagttttctcctaggaagaaggctgagcaatcatctgaacagcaagcagtgaagaacacagactttggtgcaagactagaggaagcatcgcagagcgatgatgattatgagccaactcctgtctatcaggtagcctataactcatttgatgctgaggatctcccatctgagagtggggcatttgagaatgaagaatctgaaaggcaagatatagcagatgacgtccagatggagtcttctcttggagttgcagataattgtgtagatattcatggaactcaatcatttgatggcaacacggacatggtggtggacacaactattgtggatgttgaccaaaacgggaaggactcggcagtgcttcccgttgtagatttggagcctgaaacatcaaaacaaggacggcgccaacaaaacaggaagggtagagcaaaaggtggtgtaaaacggacacggtctgttcttgcggtagttgaagatgctaaagaaatacttggtgagaatttagaagtaaaaaaggatgatggccagggagattcagttactgtgggtggtacacggaagcggcgctttgctggagccacaatcagtgagcaagatgaggacagtgaagctcattctgaaagtgtttcacttggagggcagcgccgcaagaggcgccaaacagctgcagcagttacgcaagccccaggagaaaaacgctacaacctcaggcgcaccacagttgcaaatgcggcaactgcagcccaaaccaacaaaaagaaagctgcgaaaaagggaagtaaacagacagtagaggctaccgcagatgacacagaaggaacctcaaaggctgaggaacctgccactgggagcaaaggggcctcccaatcagctgatgatgcatctcaattacccgagtactcgcaggctgaagctggtgacacacatggccctgtagaggtcactagtgcagagggggtagatattgtggatggtatagatgcagcaccagatgcgatgcctatgacaccatcaggaagtgaacttggagctgaacaggatgatgaggaggacgatgactccgaaaggcggaaccaatcaattgggaaaaagctatggtctttcttcactacatga</cdnaseq>

Protein Sequence

<aaseq>MFTPQGKGWTGWSTPAPANQRSGGGAPAASAPLGKGKGTTLRVA ELEQELHEYQYNMGLLLIEKKEWTAKLDEINQALTQKEEILKREQAAHLNAISEYERR EESMRKALGVEKQCVTDLEKALREIRGEIAEVKFMSEKKITDAQSLEASLEEKRLEIE GKLHAADAKLAEANRKKSQADRDLEEVEARQRRLEKEKLYFENERKAGEDRIKRQEDS LRDWDKKLKESQNRILDLQRSLNDREERANENDKLFKIKQEELEEAKKALEHTKATLK IKEDDINKRLAELHLQEKEAESKNRKLEEREKKIAEREEKVSAREKVGLQKLLEDHNV KLESKRRDFDLQLENEKKSFDAMLVQKEADLVQREKDVRSSEEKLSKKEQVLNESKKK LEEWQNDLDTKSNALKKWEESLQNDEKQLSEQKLQIENERKQAEMYKLELESLKATVV AEKEKILQEQNNLKLTEEERQEHIMLTAQLKKEIDEYRMRSNSLSEETEDLRKQRQKF EEEWEQLDEKRTHLEEEAKKLNNEKKNLERWHDNEEKRLKDREDELDIKYKEQGENLA LKEKSLIDNIDHQRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKE NELNRKMDFVENELKRAAELNESKIQKILLEKKQLQKEKEVLVEDRQKLETDKADIRR DIDSLNTLSKSLKERREAYNRDRNNLIDIFEKYKVCKNCGVIIFEGLDALALKDSTDI EYPSLAVEADDRSPNPDTLAQETGALVNSGGRLSLLQKCSRIFKFSPRKKAEQSSEQQ AVKNTDFGARLEEASQSDDDYEPTPVYQVAYNSFDAEDLPSESGAFENEESERQDIAD DVQMESSLGVADNCVDIHGTQSFDGNTDMVVDTTIVDVDQNGKDSAVLPVVDLEPETS KQGRRQQNRKGRAKGGVKRTRSVLAVVEDAKEILGENLEVKKDDGQGDSVTVGGTRKR RFAGATISEQDEDSEAHSESVSLGGQRRKRRQTAAAVTQAPGEKRYNLRRTTVANAAT AAQTNKKKAAKKGSKQTVEATADDTEGTSKAEEPATGSKGASQSADDASQLPEYSQAE AGDTHGPVEVTSAEGVDIVDGIDAAPDAMPMTPSGSELGAEQDDEEDDDSERRNQSIG KKLWSFFTT</aaseq>

Gene Sequence

<dnaseqindica>5100..5309#4749..4932#2531..4638#2101..2184#1727..1997#1387..1640#782..991#1..147#atgtttactccgcaggggaaggggtggaccgggtggtcgacgccggctccggcgaaccagcggagcggtggcggcgctcccgccgcgtcggcgccccttggcaaggggaaagggactactctgcgggtcgccgaactggaacaagaggtgtttttttttaacccaaatcctggcttttctttctgttcgtggatgtagcttttgaattccaatctagggccatgtttctttgctcaccaaatgcaatgtgcggtttttcatggcatgctatcagtcgatgagaagtggaagcagtgaaattgagtgaaaaaaaatattagtgtgcctcgtgatttcattttgaaccgtaaatcatttgaacattccaattttcatttatttgtgcgaggccatttctgcacttgctaatgatttaaataacgtggtttcttatgaactgcttaagaaacagagcgctgcctagggtgctacattacattggtgtcattcttatgtccttttaataactcttcagtcatgttaatctattatttgaatataaaataggcttgtagaaactactgtaacaagtagttaggcatgcaaatacctacggaaggtggaatgttttatgtgattgacttctatgttccattataagcattcgatctaatatatatttttcttcagttcttatctctctcacgctggcttcctaaatcatatttactacagttgcacatccattttcttgtttgatcataccattagtagttattttcttttgtgttcatgtccgcagttacatgaatatcagtacaatatggggctgcttttgattgagaaaaaagagtggacagccaaacttgatgaaatcaatcaagcgctgacacagaaagaagagattttaaagcgggaacaagctgcccatttgaatgccatatcagaatacgaaaggcgggaggaaagcatgcggaaagcattgggtgttgagaagcaatgcgtaacagatgtatgttattctctaataatttcttactcttgctgtttatcagtatttcctaatattcgtaatgctgttaactgttgatgactaagcagttttttgaatactatactgcatatactggtgatatcatatactggtgatatgtaaattttatcacagtcatgaatcatgatgtaataatatctaatggtcaaatgaattggttgaataatttctaggttatggtttctccagccaatagtttttaacactgcattgtccttatgtttatgtttaacaaaagttctatgtatctgagcacacagcacttgtcatctgcagtcctttagccttcggaccatgtacttttgaacgcttcattcttgtttcttatcacttcatatttctgaactttgcagctcgaaaaggcactgcgtgaaattcgtggagagatagccgaggttaagtttatgtctgagaaaaagataactgatgctcaatcccttgaggctagtttggaggaaaaaaggttggagatcgagggtaagcttcatgctgcagatgcgaagcttgctgaggcaaaccgtaagaaatctcaggctgacagggatttagaggaggtagaagctcgtcagcgtaggctggagaaggagaagctatattttgaaaatgagtatggcattcttgcccgttttcctttgtctgtgtgctctctactgtgccaagcaattgattattgtatgtcattgatatgtttaggaggaaggcaggggaggaccggatcaagcgtcaggaggattcattacgtgactgggacaaaaagcttaaggaaagtcagaatagaattcttgatttgcagagatccctaaatgatcgagaggagagagcaaacgagaatgacaaacttttcaagataaagcaagaagagttggaggaagcaaaaaaagctctggagcatactaaagctacactcaaaattaaagaggacgacattaacaaacgactagctgaattacatttacaagaaaaggtaatccatatatcactgaatgccttttcctttatcctcatttcacattattacaaattgatagtggaattaaaatacatatcctgtttctattcgattataggaagctgaatcaaagaacaggaaattagaagaaagagagaaaaaaatagctgaaagggaagaaaaagtcagtgcaagggaaaaagtaagtatgataggctaatattgtgtttcttcttcaatatagttatacacttgatagcaatgtctagaccatgttggattgttggttgtgttttgttctaggtaccgtttggtaaactcgattttgtgttaaatatgtgggtttgatgttttatgttctctgttattcagcttgttccctgttttatgcattcactattgcataaagttgcttatcaattggtgcttttatctcttttgtgatctcttctttcaatataagtagcatcatgtccgtgtgttgcaatgactcctaaataaatatactatactctttcatataattgtaccaaccaattctgttgcaggttgggcttcagaagcttcttgaagatcataatgtgaagcttgaatccaaaagacgagattttgatttacaactggagaatgagaagaaatcatttgatgcaatgttggtacagaaggaagctgatttggtgcagagggaaaaagatgtcagatcttcggaggagaagctttcgaaaaaagaacaagtattaaatgaaagtaagaaaaaattggaagaatggcaaaatgatcttgatacaaaatcgaatgctctgaagaagtgggaggaatcactacaaaatgatgagaaacagttatcggaacaaaagctgcagattgaaaatgaaagaaagcaggctgagatgtacaaattggagcttgagagtttgaaagccacagtggttgctgaaaaggagaaaatattgcaagagcagaacaatttgaaacttacagaggaagagaggcaagagcacatcatgcttacagcacaactgaagaaagagattgatgaatacagaatgcgaagcaactctctttctgaggaaactgaagatttgaggaagcagcgtcagaaatttgaagaagagtgggagcagctggatgaaaaaagaactcacttggaagaggaagccaagaaactgaacaatgaaaagaagaatctagaaaggtggcatgacaatgaagaaaaaaggctaaaggatagagaggatgagttggacataaaatacaaggagcagggggaaaatctcgcacttaaggaaaaatccttgatcgataatatagaccatcagcgtttggaaaatgaggaattgctaaagagagagcgtgctgatcttcaacgaaatttgcagctccatcggcatgaattggagatggagatggagaaaaaacaagcgagcaaagagagagaacttgaagagaaggaaaatgagttaaataggaagatggactttgtagaaaatgagctcaaacgtgcagccgaattgaatgaatcaaagattcagaagatactattggagaaaaaacagctgcagaaggaaaaggaagttcttgtggaggataggcaaaaactggaaactgacaaggcagatatcagaagggacattgatagtctgaacactctcagcaagagtctgaaagagcgtagagaagcatataacagggacaggaataacctcatcgatatatttgaaaagtacaaggtgtgcaaaaattgcggggttattatttttgagggcttggatgccctagctcttaaagatagcactgatatagaatatcctagtcttgctgttgaggcggatgatcgttcccccaatcctgacaccttagcccaagagaccggagcacttgttaattcaggtggccgtttatcattgttgcagaagtgttcaaggattttcaagttttctcctaggaagaaggctgagcaatcatctgaacagcaagcagtgaagaacacagactttggtgcaagactagaggaagcatcgcagagcgatgatgattatgagccaactcctgtctatcaggtagcctataactcatttgatgctgaggatctcccatctgagagtggggcatttgagaatgaagaatctgaaaggcaagatatagcagatgacgtccagatggagtcttctcttggagttgcagataattgtgtagatattcatggaactcaatcatttgatggcaacacggacatggtggtggacacaactattgtggatgttgaccaaaacgggaaggactcggcagtgcttcccgttgtagatttggagcctgaaacatcaaaacaaggacggcgccaacaaaacaggaagggtagagcaaaaggtggtgtaaaacggacacggtctgttcttgcggtagttgaagatgctaaagaaatacttggtgagaatttagaagtaaaaaaggatgatggccagggagattcagttactgtgggtggtacacggaagcggcgctttgctggagccacaatcagtgagcaagatgaggacagtgaagctcattctgaaagtgtttcacttggagggcagcgccgcaagaggcgccaaacagctgcagcagttacgcaagccccaggagaaaaacgctacaacctcaggcgcaccacagtgtaagtttctgtatttatcccacgtttaatttctactcaaggttatcatcctttttttaactgacttgtggagtaaattgatttcctttttgctttattttgttggaaagtgcaaatgcggcaactgcagcccaaaccaacaaaaagaaagctgcgaaaaagggaagtaaacagacagtagaggctaccgcagatgacacagaaggaacctcaaaggctgaggaacctgccactgggagcaaaggggcctcccaatcagctgatgatgcatctcaattacccgagtactcgcaggtaagatccattctgcattgtttgctattctgtattttatgtaatactttgaaaggctttcagtatcttggatgcatgcctttctgggttgaggccaagctttctttttgggtttgtgtggcatatacattcaggatcacagctaactcgaaacttgctcttgttaggctgaagctggtgacacacatggccctgtagaggtcactagtgcagagggggtagatattgtggatggtatagatgcagcaccagatgcgatgcctatgacaccatcaggaagtgaacttggagctgaacaggatgatgaggaggacgatgactccgaaaggcggaaccaatcaattgggaaaaagctatggtctttcttcactacatgacaattgcagagggctactgaataggttatttctagcgtttctgttttcgattcatgacatgccattcttggaactctaggttgtgtgcttggtgatgatgatgatgtactagtagattttcccacttcaattatgttctccccctgtaattgaaatatatttgtagtagacatagctttgatgggcgctcacagaagttagcttttgagaatgtacaatggcgcgatgcctgtaactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0709900, RefSeq:Os02g0709900