Os10g0439200

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0439200| Description = Similar to Alpha-expansin OsEXPA25| Version = NM_001071220.1 GI:115482183 GeneID:4348718| Length = 1017 bp| Definit...")
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Gene Name

Os10g0439200

Description

Similar to Alpha-expansin OsEXPA25

Version

NM_001071220.1 GI:115482183 GeneID:4348718

Length

1017 bp

Definition

Oryza sativa Japonica Group Os10g0439200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16212085..16213101

Sequence Coding Region

16212085..16212397,16212647..16213101

Expression

GEO Profiles:Os10g0439200

Genome Context

<gbrowseImage1> name=NC_008403:16212085..16213101 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16212085..16213101 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtgatcaggttcttcgccgtcctggcggcggcgctgtgcatcacgtcggcctcggctgcggcggcgggcggctgggtgagcgggacggcgacgttctacggcgggaaggacgcgtcggggacgatgggcggggcgtgcgggtacgggaacctgtacacgcaggggtacggcgtgtacaacgcggcgctgagcacggcgctgttcaacggcggcgcgtcgtgcgggcagtgctacctcatcatgtgcgacgcctccaagacccccgagtggtgcaaggccggcaccgccgtcaccatcaccgccaccaacctctgcccccccaactgggccctcgccaacgacgacggcggctggtgcaacccgccccgcccccacttcgacatgtcccagcccgcctgggagaccatcggcatctaccgcgccggcatcgtccccgtcctctaccaacaggtgaagtgctggaggcagggaggggtgaggttcacagtctccgggttcaactacttcgagctggtgctcatcaccaacgtcgccggcagcgggtcggtgcaggcgatgtcggtgaaggggagcaagacggggtggataccgctggcgaggaactggggcgcgaactggcagtgcaactcggcgctcgtcgggcaggcgctgtcgttccgggtcacctccaccggcggccagacgctgcagatcaacagcgtcgtgccggagtggtgggagttcgggacgaccttcaccagcaaccagcagttcgactactga</cdnaseq>

Protein Sequence

<aaseq>MMVIRFFAVLAAALCITSASAAAAGGWVSGTATFYGGKDASGTM GGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTIT ATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGG VRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQA LSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQQFDY</aaseq>

Gene Sequence

<dnaseqindica>705..1017#1..455#atgatggtgatcaggttcttcgccgtcctggcggcggcgctgtgcatcacgtcggcctcggctgcggcggcgggcggctgggtgagcgggacggcgacgttctacggcgggaaggacgcgtcggggacgatgggcggggcgtgcgggtacgggaacctgtacacgcaggggtacggcgtgtacaacgcggcgctgagcacggcgctgttcaacggcggcgcgtcgtgcgggcagtgctacctcatcatgtgcgacgcctccaagacccccgagtggtgcaaggccggcaccgccgtcaccatcaccgccaccaacctctgcccccccaactgggccctcgccaacgacgacggcggctggtgcaacccgccccgcccccacttcgacatgtcccagcccgcctgggagaccatcggcatctaccgcgccggcatcgtccccgtcctctaccaacagtaagacacaccataatataccttctacggtgctctctactggtagtattagacatcagatttaacttttcggtttgaccgattgtatcggaggccaccaatagagtgaaattcacgaaaaattaaaaattccggctaaaataatattgtatcgaagggatccggaatttctgaaatctcaaaaatttcagtctgaattttccaacccgttaacgatgatgactaaggtcaaaatgttattattactagggtgaagtgctggaggcagggaggggtgaggttcacagtctccgggttcaactacttcgagctggtgctcatcaccaacgtcgccggcagcgggtcggtgcaggcgatgtcggtgaaggggagcaagacggggtggataccgctggcgaggaactggggcgcgaactggcagtgcaactcggcgctcgtcgggcaggcgctgtcgttccgggtcacctccaccggcggccagacgctgcagatcaacagcgtcgtgccggagtggtgggagttcgggacgaccttcaccagcaaccagcagttcgactactga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0439200, RefSeq:Os10g0439200