Os02g0712600

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0712600| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001054443.1 GI:115448256 GeneID:4330502|...")
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Gene Name

Os02g0712600

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001054443.1 GI:115448256 GeneID:4330502

Length

3030 bp

Definition

Oryza sativa Japonica Group Os02g0712600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30402588..30405617

Sequence Coding Region

30402830..30403683,30404239..30405589

Expression

GEO Profiles:Os02g0712600

Genome Context

<gbrowseImage1> name=NC_008395:30402588..30405617 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30402588..30405617 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtgctcatgctagtgtggtgcgtgtccgttttcttgctcctcccatctgccaccgcgcaggccaccaccttcaccagcaacgtcgacggcaaggagttcaccacattctccttccccaagttcgacaagcccctgttgcagctccccgacaacctgaccttctcaggcaacgccaccatcgcccaggacgggttgcagctcaccccggacagcggcaacaggcccgagatattcctcgtcaaccaggccggccacgccttcttcaccgccccgttcgtcgtctgggaatccaagtcgtcgtcgtcgtcgtccaactccgccgccgctgccgccgatggaaagtacgtcgcctcgttctccaccgtgttcaaggttaacctgttccgctcgaacctgaacaagacggtcaagggcgaggggctcgcgttcgtcgtcgcgtcgagcaacgcccgcgggccgccggtcggtagccacggcgggttcctcggcctcaccaacgcctccaccgacggcaacgccaccaacgggttcgtggccgtggagctggacacagtgaagcagcgctacgacatcgacgacaaccacgtcggcctcgacgtcaacggcgtccgatccaccgccgcggcgccactcgccccactgggtatccagctcgcgcccaggaacaccaccgtcgacgacggcatctgctttgtctgggtcgactacaatggcacgtcgcggcggatgtcggtgtacatcgccaagaacgagagcaagccctccgccgccgtgctcaacgcgtcgctggacctctccaccatcctcctcggcaagacggcgtacttcggcttctcggcgtccaccggcgccgcgacgtaccagctcaactgcgtgcgcatgtggaacatgaccgtcgagaggctccacgacggcaccaccaccaccgccacgaagctagccggcacgtccggctggaagttggccgtcggcgtgttgtgcggcgtcgccgtggtgctcggggtggtcgccgcgctgtacatccggaagaggaggagacggagcggcggcgacccgagctcggcgttcaacgccgccattgatttcaggaagatcccaggtttgcccaaggagttcgactacatggagctgaggagagggacgaacaacttcgacgagaagatgaagctggggcagggcgggtacggcgtggtgtaccgcgccaccgtggtcggggaagatggccggagcacggacgtcgccgtgaagcagttctccggtgcaaacaccaaggggaaggaggatttcctcgccgagctcagaattatcaactgcctccgtcatcgcaatctcgtcaagatcgtcggttggtgccgccaaaatggcaggctgttgctagtgtacgactacatgccgaacggcagcctggacaggcacatcttcggcgagccgggcgcggcggcgctggactggaagcagcgctacaacgtcgtcgccggcgtcgcgtcggcgctgaactacctccaccacgagtacgaccagatggtgatccaccgcgacatcaagccgtccaacatcatgctcgactccgccttcaacgcgcggctcggcgacttcggcctcgcccgcgcgctcgagtccgacaagacgtcgtacaccgacatggccggcgtcacggggacgctggggtacatcgcgccggagtgcttccacaccggccgcgcgacgcgggagtcggacgtgttcggcttcggcgccgtcgtcctggagatcgtctgcggccgccgcgtctcctgcagcgacctccccggctggctcagcctgctggagtgggtctggaagctccacggcgcggctggcggcggcggcatcctcgaggccgtcgaccagaggctcgccggcgagttcgacgaggtcgaggccgagcggctcctgctgctgggcctcgcgtgcagccacccgaaccccggggagcggccgaggacgcaggccatcctgcagatcctgacgggcgccgccccgccgccgcacgtgccgccgtcgaagccggcgttcatgtggcccgcgatgcccgtcgcgctcgatggcgacgacgacgacagcgagacgccgacgtcgcgcagcagcatgctgctgacctcgtcgtcgacggggtggaccaaaatcttccaggtgagcaaagagcatgacgtggcggagaaggacgtggccgcagagtga</cdnaseq>

Protein Sequence

<aaseq>MAVLMLVWCVSVFLLLPSATAQATTFTSNVDGKEFTTFSFPKFD KPLLQLPDNLTFSGNATIAQDGLQLTPDSGNRPEIFLVNQAGHAFFTAPFVVWESKSS SSSSNSAAAAADGKYVASFSTVFKVNLFRSNLNKTVKGEGLAFVVASSNARGPPVGSH GGFLGLTNASTDGNATNGFVAVELDTVKQRYDIDDNHVGLDVNGVRSTAAAPLAPLGI QLAPRNTTVDDGICFVWVDYNGTSRRMSVYIAKNESKPSAAVLNASLDLSTILLGKTA YFGFSASTGAATYQLNCVRMWNMTVERLHDGTTTTATKLAGTSGWKLAVGVLCGVAVV LGVVAALYIRKRRRRSGGDPSSAFNAAIDFRKIPGLPKEFDYMELRRGTNNFDEKMKL GQGGYGVVYRATVVGEDGRSTDVAVKQFSGANTKGKEDFLAELRIINCLRHRNLVKIV GWCRQNGRLLLVYDYMPNGSLDRHIFGEPGAAALDWKQRYNVVAGVASALNYLHHEYD QMVIHRDIKPSNIMLDSAFNARLGDFGLARALESDKTSYTDMAGVTGTLGYIAPECFH TGRATRESDVFGFGAVVLEIVCGRRVSCSDLPGWLSLLEWVWKLHGAAGGGGILEAVD QRLAGEFDEVEAERLLLLGLACSHPNPGERPRTQAILQILTGAAPPPHVPPSKPAFMW PAMPVALDGDDDDSETPTSRSSMLLTSSSTGWTKIFQVSKEHDVAEKDVAAE</aaseq>

Gene Sequence

<dnaseqindica>1935..2788#29..1379#gcttctgcgccgtctccgccgtgccgccatggccgtgctcatgctagtgtggtgcgtgtccgttttcttgctcctcccatctgccaccgcgcaggccaccaccttcaccagcaacgtcgacggcaaggagttcaccacattctccttccccaagttcgacaagcccctgttgcagctccccgacaacctgaccttctcaggcaacgccaccatcgcccaggacgggttgcagctcaccccggacagcggcaacaggcccgagatattcctcgtcaaccaggccggccacgccttcttcaccgccccgttcgtcgtctgggaatccaagtcgtcgtcgtcgtcgtccaactccgccgccgctgccgccgatggaaagtacgtcgcctcgttctccaccgtgttcaaggttaacctgttccgctcgaacctgaacaagacggtcaagggcgaggggctcgcgttcgtcgtcgcgtcgagcaacgcccgcgggccgccggtcggtagccacggcgggttcctcggcctcaccaacgcctccaccgacggcaacgccaccaacgggttcgtggccgtggagctggacacagtgaagcagcgctacgacatcgacgacaaccacgtcggcctcgacgtcaacggcgtccgatccaccgccgcggcgccactcgccccactgggtatccagctcgcgcccaggaacaccaccgtcgacgacggcatctgctttgtctgggtcgactacaatggcacgtcgcggcggatgtcggtgtacatcgccaagaacgagagcaagccctccgccgccgtgctcaacgcgtcgctggacctctccaccatcctcctcggcaagacggcgtacttcggcttctcggcgtccaccggcgccgcgacgtaccagctcaactgcgtgcgcatgtggaacatgaccgtcgagaggctccacgacggcaccaccaccaccgccacgaagctagccggcacgtccggctggaagttggccgtcggcgtgttgtgcggcgtcgccgtggtgctcggggtggtcgccgcgctgtacatccggaagaggaggagacggagcggcggcgacccgagctcggcgttcaacgccgccattgatttcaggaagatcccaggtttgcccaaggagttcgactacatggagctgaggagagggacgaacaacttcgacgagaagatgaagctggggcagggcgggtacggcgtggtgtaccgcgccaccgtggtcggggaagatggccggagcacggacgtcgccgtgaagcagttctccggtgcaaacaccaaggggaaggaggatttcctcgccgagctcagaattatcaactgcctccgtcatcgcaatctcgtcaagatcgtcggtaagcgatcatttctcgttctggttaaccgaaaaggatacttagtttagattgaagttgtgattagagtattagattgggtacggtttgtctaataatttggagtaggaaataatattctgagatggcacacaagttggcacggcaaatagatgttttaagaagctcaccacgctatgtggcaacttgggccacttggcagctaaatttaaaattgaatcatcagtccatgacgtctttgcaagcagattgaatcataagatagatattggagtgctctggttgacaatatgataatgcaagatttgatcttttgcttgcattgtgttagaagaaatatagcgttcgttagttggaacttggaacagccatgcaaatgcacatctctctctatatatatatatagtttaattagctgccaattcaccataagaggagacattcatatcccaaaacaaacaccgtacgttcagtcttcatttttcaaatttcaaaatgatacgaaattctgtaagcaagttctaaacacattttggacgacatgcacgtctgcaggttggtgccgccaaaatggcaggctgttgctagtgtacgactacatgccgaacggcagcctggacaggcacatcttcggcgagccgggcgcggcggcgctggactggaagcagcgctacaacgtcgtcgccggcgtcgcgtcggcgctgaactacctccaccacgagtacgaccagatggtgatccaccgcgacatcaagccgtccaacatcatgctcgactccgccttcaacgcgcggctcggcgacttcggcctcgcccgcgcgctcgagtccgacaagacgtcgtacaccgacatggccggcgtcacggggacgctggggtacatcgcgccggagtgcttccacaccggccgcgcgacgcgggagtcggacgtgttcggcttcggcgccgtcgtcctggagatcgtctgcggccgccgcgtctcctgcagcgacctccccggctggctcagcctgctggagtgggtctggaagctccacggcgcggctggcggcggcggcatcctcgaggccgtcgaccagaggctcgccggcgagttcgacgaggtcgaggccgagcggctcctgctgctgggcctcgcgtgcagccacccgaaccccggggagcggccgaggacgcaggccatcctgcagatcctgacgggcgccgccccgccgccgcacgtgccgccgtcgaagccggcgttcatgtggcccgcgatgcccgtcgcgctcgatggcgacgacgacgacagcgagacgccgacgtcgcgcagcagcatgctgctgacctcgtcgtcgacggggtggaccaaaatcttccaggtgagcaaagagcatgacgtggcggagaaggacgtggccgcagagtgaacagccgggaagagtcagcggctcgcgtgcgggcgaggcctggtcaatcgagaccgtcgagctggtggaacactggacgacgtgcaggagtatgaccaaacaaaacggagtaaaaaaatgtgcgttgccatggaatggcggaggttgtttttgctctaacatttttcaacttgctgcgttaaatacaatctagtggtgtacggcggtgagtgtagtttatgcgagtagtagctgtatttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0712600, RefSeq:Os02g0712600