Os02g0715000

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Revision as of 02:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0715000| Description = Similar to Cysteine proteinase| Version = NM_001054458.1 GI:115448286 GeneID:4330517| Length = 1830 bp| Definition ...")
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Gene Name

Os02g0715000

Description

Similar to Cysteine proteinase

Version

NM_001054458.1 GI:115448286 GeneID:4330517

Length

1830 bp

Definition

Oryza sativa Japonica Group Os02g0715000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30554604..30556433

Sequence Coding Region

30554604..30555096,30555446..30555681,30555803..30555943,30556053..30556283

Expression

GEO Profiles:Os02g0715000

Genome Context

<gbrowseImage1> name=NC_008395:30554604..30556433 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30554604..30556433 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaggaaacaatagccttcttgccatggactccaagctctccatgctcttcttgttgctaggctttgtggcatgttctgccactgctagtcaccatgatccttccgttgtcggatactcgcaggaggatcttgcattgccaaataagcttgttggtctcttcacatcatggtcagtaaaacatagcaagatctatgcaagcccaaaggagaaggtcaagaggtatgagatcttcaagcgaaacctgaggcacattgtggagacgaacaggagaaatggcagctattggctcggcttaaatcattttgctgacattgcacatgaagaattcaaggccagttacctgggactgaagccagggttagcaagaagggatgctcagccacatggttcaacaacattcaggtacgcgaacgccgttaacttgccctgggcagtggactggaggaagaagggagcagtgacaccggtcaagaaccaaggagaatgtggaagttgctgggctttttcaacggtggcagctgttgaggggataaaccagattgtgaccggcaagttggtatcactatcagagcaggaactgatggactgcgacaacaccttcaatcatggctgtcgaggtgggctgatggacttcgccttcgcatacataatggggaaccaggggatctacacagaggaagactacccatacctcatggaagaaggctactgcagagaaaagcagcctcattccaaagtcatcaccataaccggctacgaggatgtcccggcgaacagcgagacaagcctactgaaggcactggctcatcagcctgtcagtgtggggatagcagctgggagcagagactttcagttctacaaaggggggatctttgatggggaatgtggcattcaaccggatcatgcactgacggccgtgggctacggctcgtactacggccaggactacatcatcatgaagaactcgtggggcaagaactggggagagcaagggtatttcaggatcaggaggggcaccggcaagccggagggagtctgtgacatatacaagattgcttcttacccaaccaaaaacgtcactggctggggttcatag</cdnaseq>

Protein Sequence

<aaseq>MAGNNSLLAMDSKLSMLFLLLGFVACSATASHHDPSVVGYSQED LALPNKLVGLFTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRRNGSYWLGLNH FADIAHEEFKASYLGLKPGLARRDAQPHGSTTFRYANAVNLPWAVDWRKKGAVTPVKN QGECGSCWAFSTVAAVEGINQIVTGKLVSLSEQELMDCDNTFNHGCRGGLMDFAFAYI MGNQGIYTEEDYPYLMEEGYCREKQPHSKVITITGYEDVPANSETSLLKALAHQPVSV GIAAGSRDFQFYKGGIFDGECGIQPDHALTAVGYGSYYGQDYIIMKNSWGKNWGEQGY FRIRRGTGKPEGVCDIYKIASYPTKNVTGWGS</aaseq>

Gene Sequence

<dnaseqindica>1..493#843..1078#1200..1340#1450..1680#atggcaggaaacaatagccttcttgccatggactccaagctctccatgctcttcttgttgctaggctttgtggcatgttctgccactgctagtcaccatgatccttccgttgtcggatactcgcaggaggatcttgcattgccaaataagcttgttggtctcttcacatcatggtcagtaaaacatagcaagatctatgcaagcccaaaggagaaggtcaagaggtatgagatcttcaagcgaaacctgaggcacattgtggagacgaacaggagaaatggcagctattggctcggcttaaatcattttgctgacattgcacatgaagaattcaaggccagttacctgggactgaagccagggttagcaagaagggatgctcagccacatggttcaacaacattcaggtacgcgaacgccgttaacttgccctgggcagtggactggaggaagaagggagcagtgacaccggtcaagaaccaaggagaatgtggtaagctcaatgtctgaaaaatgcacactatctatttagcatagtgatactgaatccctgaaaatgcacacgatctattcagcatattgaggccgaatgcctgaaaatgcacacaatttatttcagcacggtgatactgaatccctgcacacaatcaatttcagcatattaatgctgaatgcctgaaaatgtgcacaatctatttcatcgcatcgatactcaatgcctgaaactgagagtgcacacagtctgtttcagcatattaatactaaatcactatctgaaatagtgtatgatatgatgcaatttgttccatgaaaatgctgtaagagaaaacggtctcttgcaggaagttgctgggctttttcaacggtggcagctgttgaggggataaaccagattgtgaccggcaagttggtatcactatcagagcaggaactgatggactgcgacaacaccttcaatcatggctgtcgaggtgggctgatggacttcgccttcgcatacataatggggaaccaggggatctacacagaggaagactacccatacctcatggaagaaggctactgcagagaaaagcaggtagaaacatgaaaaccacttcttcttcagaggcaattcagctgtaaacacatgtagtgatctagcaggatctctaacagttgaatttatctgctgtgatgaactgatgactggtggttagcctcattccaaagtcatcaccataaccggctacgaggatgtcccggcgaacagcgagacaagcctactgaaggcactggctcatcagcctgtcagtgtggggatagcagctgggagcagagactttcagttctacaaaggggtaaacaaaattatcagctgttcttcaatcttcattcaccatgatacagtacagatcagcacaaaaacattaaactgacaaaatgggtgtatctgaatactggatgcaggggatctttgatggggaatgtggcattcaaccggatcatgcactgacggccgtgggctacggctcgtactacggccaggactacatcatcatgaagaactcgtggggcaagaactggggagagcaagggtatttcaggatcaggaggggcaccggcaagccggagggagtctgtgacatatacaagattgcttcttacccaaccaaaaacgtcactggctggggttcatagctagttttgtaggcgatcttgtaatccatttgtctctgacaagaaagaaccggcctaagcaacgctgtgcaattcctggatgcttcggagtggagctcttaagcagcacagcaatggtttattatataatgacagcttgggtttttaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0715000, RefSeq:Os02g0715000