Os10g0439800

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0439800| Description = Cytochrome P450 family protein| Version = NM_001071223.2 GI:297610551 GeneID:4348721| Length = 6311 bp| Definition ...")
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Gene Name

Os10g0439800

Description

Cytochrome P450 family protein

Version

NM_001071223.2 GI:297610551 GeneID:4348721

Length

6311 bp

Definition

Oryza sativa Japonica Group Os10g0439800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16250787..16257097

Sequence Coding Region

16250787..16250815,16253563..16254130,16256165..16257097

Expression

GEO Profiles:Os10g0439800

Genome Context

<gbrowseImage1> name=NC_008403:16250787..16257097 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16250787..16257097 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacaagctgccgctggctctgaccgtactgtcagtgtccgtgctcatcgccgtcgtcatctccaagctggtatcatatgccaccaagccaaggctcaacctgccgccggggccatggaagctgccggtgatcggcagcctccaccacctcgtggggagccacgccatccaccggtcgatgcgcgcgctcgccgagaagcacgggcgccaccacctcatgcagatatcgctcggcgaggtgttcgccgtggtcgtgtcgtcgccggaggcggcggaggagatcctcaggaaccaggacgtcacgttcgccgaccgcttcctcagcaccaccatcggggtgatcaccttcggcggcaacgacatggccttcgcgccctacggcgagcggtggcggcagctccggaagctgtgcacgctggagctcctgtccgccgcgcgggtgaggtcgttccggcgcatccgcgaggaggaggtggcgcgcctggtccgggacctcgccgcgtccgccgccgccggcgaggccgtgaacctgagcggcaggatcgcgaagctcatcaacgacgtcgtcgtgaggtgctgcgtcggcggccggagcgagcaccgcgacgagttcctcgacgccctccgcaccgcgttggaccagacgacatggctcaccgtggccgacgtcttcccgtcgagcaagctcgcgcggatgctcggcacggcgccgcgcaaggcgctcgccagccggaagaagatagagcacatcttggagcagatcattcaagaacgaaagaggatcatggacaggagcagccatggcggcgacggcgacggcgaggcgatgaacacgagcgagtgcttcttggatgtcctgctgaggcttcagaaggatggcaacacaccaatcccaattactaacgaagtcatcgtcgtgcttttatttgacatgttttcagggggcagcgagacatcatcttccacattaatctggacaatggcagaactcatcagaaaaccaaaagtaatggcaaaggctcatgttgaagtgcggcaagctttccaaggaaagaacaccatcacagaggatgacggtgtaaacgagttgacctatctcaaaatggtgattaaggagtcattgaggatgcactgcccagtgccccttttaggccctcgtaaatgccgagagacatgcaaagttatgggctacgacataccgaaagacacaactgtatttgtgaatgcatgggcaatatgcagagacccaaaatattgggatgatgccgaagagtttcaaccagagaggtttgagaacaaaagtatcgactttaaaggaagtaactttgaattccttccatttggatcgggccgtagaatgtgtgcggctatgaaccttggcattgcaaatgtagagctccccttagctagccttctgtatcattttgattggaagttgcctgatggaatgatgcctgaagatgttgacatgcaggatgcacctggaatacttgtaggactcaaggacgaccttttgttcctgtaa</cdnaseq>

Protein Sequence

<aaseq>MEDKLPLALTVLSVSVLIAVVISKLVSYATKPRLNLPPGPWKLP VIGSLHHLVGSHAIHRSMRALAEKHGRHHLMQISLGEVFAVVVSSPEAAEEILRNQDV TFADRFLSTTIGVITFGGNDMAFAPYGERWRQLRKLCTLELLSAARVRSFRRIREEEV ARLVRDLAASAAAGEAVNLSGRIAKLINDVVVRCCVGGRSEHRDEFLDALRTALDQTT WLTVADVFPSSKLARMLGTAPRKALASRKKIEHILEQIIQERKRIMDRSSHGGDGDGE AMNTSECFLDVLLRLQKDGNTPIPITNEVIVVLLFDMFSGGSETSSSTLIWTMAELIR KPKVMAKAHVEVRQAFQGKNTITEDDGVNELTYLKMVIKESLRMHCPVPLLGPRKCRE TCKVMGYDIPKDTTVFVNAWAICRDPKYWDDAEEFQPERFENKSIDFKGSNFEFLPFG SGRRMCAAMNLGIANVELPLASLLYHFDWKLPDGMMPEDVDMQDAPGILVGLKDDLLF L</aaseq>

Gene Sequence

<dnaseqindica>6283..6311#2968..3535#1..933#atggaggacaagctgccgctggctctgaccgtactgtcagtgtccgtgctcatcgccgtcgtcatctccaagctggtatcatatgccaccaagccaaggctcaacctgccgccggggccatggaagctgccggtgatcggcagcctccaccacctcgtggggagccacgccatccaccggtcgatgcgcgcgctcgccgagaagcacgggcgccaccacctcatgcagatatcgctcggcgaggtgttcgccgtggtcgtgtcgtcgccggaggcggcggaggagatcctcaggaaccaggacgtcacgttcgccgaccgcttcctcagcaccaccatcggggtgatcaccttcggcggcaacgacatggccttcgcgccctacggcgagcggtggcggcagctccggaagctgtgcacgctggagctcctgtccgccgcgcgggtgaggtcgttccggcgcatccgcgaggaggaggtggcgcgcctggtccgggacctcgccgcgtccgccgccgccggcgaggccgtgaacctgagcggcaggatcgcgaagctcatcaacgacgtcgtcgtgaggtgctgcgtcggcggccggagcgagcaccgcgacgagttcctcgacgccctccgcaccgcgttggaccagacgacatggctcaccgtggccgacgtcttcccgtcgagcaagctcgcgcggatgctcggcacggcgccgcgcaaggcgctcgccagccggaagaagatagagcacatcttggagcagatcattcaagaacgaaagaggatcatggacaggagcagccatggcggcgacggcgacggcgaggcgatgaacacgagcgagtgcttcttggatgtcctgctgaggcttcagaaggatggcaacacaccaatcccaattactaacgaagtcatcgtcgtgcttttatttgtaagcaattgcgcctctgcaccaccaaacctctcctcccaacattttagtttccaacaaccaaataaaaatagttttgctatttatcaactactcaatcctttccaaaatataaccatttttggaataatgctaactcaaatatttttttactttaactaccaatagccaaaaaaaattaaaaagattgatcacgaaagagtgatgttactagtagataaatatctaatatgtaacttttcttatttaaataacttatttttataaatatcattagtcaaattagcattctgaagattatatctaaaaattgttatattttgggacggagaatatctaatctatcgcccacctagacttacatgtatgattagtctaaacttgcatgatataaaaggtacaactttcatatgcatatcgagatggtaactttatattcctttttttatatttcgaaataacatacatatattttattattctaatcaagatatgtcgttattctaatcaggactataattattctattttatgttggtaaggatcacactaaaatgtggccttttgactttaagttagttctttattttagttgttagatgaagatgtaatgatttttttaaaaaaaataatgtacatatatatgggaaaaataagtcaattggcaaatagactcaacttcactctctagagtagcttgatacatagaatcgcacatatgcatgcagttacacttaggctgtgttcgggacaccggcacgcaaaacgaagcactcattgttggacgattaattaagtattaacattttttttgaaaaatgaattaattatttttaaaacaactttcatatagaatttttttgcaaaaaaacacaccgtttagcagtttaaaaagcgtgcgcgaggaaaacgagagagttgagttgggaaaagtgggataagaactcagccttagtgaggtcaaagcgatattaacgcggttagagatttatccttggtcaaatagggttcacaatcctgatactagatcaaaatccgctcacaagcgatatcgtcagatttcatagaaattactgataaaccaacaaaaaagataaaacccaaatattgttttatcaaaagtttaaaatagtttaatattttttaacttcaccaaaataccaccgagtggtttatattttcaacccggtctaggaagtctggattttgcgaaatccaaaccgcattcaactggaactgtgaaccctattcaactggaactgtgaaccctgtaccctctttgatggtgtattaagaaagcatacttgcatgtgttaggagtgtaacattggtatccgtctatttgagtgtgttgtaagtatgagtcacatagtgcttcattttttaatgcacgatgccgttgaattttttaatatcatttgtcttattcaaaatttttgtgcaaacataaaaaaaatatgagtcatgcataaagaatctttagtggtaaatcaagccacaacaaaataaacaatagttacaaacatgtctaaaatgttaatggcgtcgtatattaaaaaatggatggaggaaatcattaaaggaaatgcaagttgcacataacaatggaagcttagctgtgcaagtttaggttggatatggcgaccaacaatatcaaaattgtgctagtaataaatcataatgctgtacggataaattcattcggttgtggtgatatttatttataagctacagacgttcttttcccctatttcaatttggctagctggaactcttctaattaggccctaagtttttaaagaacaaactatgtcatgctgaatcataaaaggtaagaaagcattaattctagtctggccaaacatataagttctcaaaattaagcagcaatgtatgtagtgcagaactctaagttctctaagtttaggtatattgagtaaatgtagggtatgttatgtaaatttatataactgaaagataaatagtttctaattaccataatgaataataatttgtgtgacaataccattccaggacatgttttcagggggcagcgagacatcatcttccacattaatctggacaatggcagaactcatcagaaaaccaaaagtaatggcaaaggctcatgttgaagtgcggcaagctttccaaggaaagaacaccatcacagaggatgacggtgtaaacgagttgacctatctcaaaatggtgattaaggagtcattgaggatgcactgcccagtgccccttttaggccctcgtaaatgccgagagacatgcaaagttatgggctacgacataccgaaagacacaactgtatttgtgaatgcatgggcaatatgcagagacccaaaatattgggatgatgccgaagagtttcaaccagagaggtttgagaacaaaagtatcgactttaaaggaagtaactttgaattccttccatttggatcgggccgtagaatgtgtgcggctatgaaccttggcattgcaaatgtagagctccccttagctagccttctgtatcattttgattggaagttgcctgatggaatgatgcctgaagatgttgacatgcaggatgcacctggaatacttgtaggtaaacgcagtagcctaattatgtgcccggttacacgtgttgctccaagcaacccacaagtgatagcatcatagataactcatcctttgtggtagataataacttgaacggtttgtactggtgtgtaatcaagttttgtatcaaataattaaggtgtaatggaagacggatttacataatttggctcccatgtagacaaagggcagaagaccagtcattacactattatcagccccgttgtttcgttatgctacttatggctatctgaatgtcttattagcaactaaaaaataatttgcgagaaaaacttttacatacatgtccttagcgattaaaaaaaatgttgtaaattaaactatgataaaataaacttcaaaaagaaattttaaaattaaaatttggcttataagtacaatcataaacgaaacaatgagggttatatgtcactacatgatctagtttgagaaagagataatgtttgcgttctcgactggaagttggcaatcatgaaggggttgtctcagcagccttggcaggtagccgttggtccaagcagtcgtgagaaaggttgctttaatgcctgcttcaagtgtacgagcacgtctctgagacattagcatattaagagtttcagtcctagcccatcatggcccatgaatgtgccatgatttggggtgtcaaaggaggcggtggccggagcacgagggagggacgcctctcagggtggagatgaccacagacgacgaggatgacctgggggagggagagaaatatgaggagagttatttgtggataaggattcggcctcagatttgaaattaatttctttcagtgggagacagtattttaacctttaggggggtgatagacacccaattgcaacagctctggagtgctccttgccccctaaaaattaaacacttcatctggtcaggtttgagagatagaattcaagcctcatctaacttagcaaaaaaagggttggaatggttcagccctgtgcttactctgtggggagctagaaaacaacagaccatatcctttttagatgccctatggctacttttgtttggtgtttgcgtagagatgtgctgggttggggacagatccctttcaacttcgatgattttttctgtttagcttaacttagaactgttttcaaacacatgaatgttaaattggcgatgcttgctgctgttagttggacactttggattactaggaataacatggtttttgcgagataaaatagcctactccccactaatgctccctttccaaatcacttctttcttaatgtagtggaaaccacttgttggtaactttttgtgacaagttgacaagcacgatcgcagcaccgaaacgccttgcggtgatatggagtcgtcaaccacctcgatctagccaaaaggccaaatcaagatgggttttgcaaaaagaaaaactaaaccggctagcggagccgatttagagatcaaaatcagcctctaggccaatttagatcgatatgaggataactacccgtctcgtgggcaaatcggaaggttttcaggacaaacctacaaagaagtgtcgcactctcgcagcggcggcggacagtttacagcgcaaaccgacaaagatagactaaattagggtaaaatagaaaacatggtaaaagaacgattcaagtagattatattcgggggttttacaatgaaccggccttgtcccttaaataggggttggttttgccctctacaggcccttctccacatccaactcaggatagaaaccaaaggaaacacgaaatatagcctttccgagcaaggaaacccgagacccgacgaaaataactcggactcggaccctgacagtctaaccgcccacatacctgcagtctgactggccctgtgaaggaaacccggtactttccaaactttgacaattttcccctatttcgttcataggtgtcaaatttggatgtaaacaccacttttcaaaggtgtggagactgatgaactggagttgctgacaagaagactgaaggaatgttgtgctggactgtgaaatatcagaactggggtgtgttagttagagtttttttgccgtctgttactttgtggaggtgttttggaaagctttttaaatcgctgtgtctggtgtatcttcacttatgggtcatgtgttgtccctgctgtctaaaaattggttgtttctctgggccggagggacctcttttggtctatgtatgtacattgatgtaagctggaatccccagcaagacaaatttgctttctatataagcagggtcgtttcgacattttctctaataaaaaagctttgaacattcatcctggatatcggttttaatatctaaaagaaaaccagtatcagtctgtagaaacaaataaaaaatcaattattagttggtcagatgcaaacctatacgactcaattaggaatttaggaacagcgagcccagcgtcattttgaccgccactccaaacatgatcaatcctaccgtaaaaaataatattgttttcattttttttactgtataatttagttttatattttttctttttattaagttgtcactaaataactaaatttataaatataaaaatatcccgactatataccaatatagttctaaaaagaaaaagaaagtattatttctgataattttcatccttacttgttcctggtttacttccatgtcaagagtccgagttatttgagatgagtcctttaaatcattgaaggactcaaggacgaccttttgttcctgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0439800, RefSeq:Os10g0439800