Os10g0440000

From RiceWiki
Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0440000| Description = Cytochrome P450 family protein| Version = NM_001071224.1 GI:115482191 GeneID:4348722| Length = 4365 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0440000

Description

Cytochrome P450 family protein

Version

NM_001071224.1 GI:115482191 GeneID:4348722

Length

4365 bp

Definition

Oryza sativa Japonica Group Os10g0440000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16263864..16268228

Sequence Coding Region

16264152..16264775,16267247..16268182

Expression

GEO Profiles:Os10g0440000

Genome Context

<gbrowseImage1> name=NC_008403:16263864..16268228 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16263864..16268228 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacaagctgctgctgctgctggctctggccgtgtcggtgctcgtcgccgtcgtcatctccaagctggtatcatatgccaccaagccaaggctcaacctgccgccggggccatggacgctgccggtgatcggcagcatccaccacctcgtggggagccaccccatccaccgctcgatgcgcgcgctcgccgagaagcacgggcgcgacctcatgcaggtctggctcggcgagcttcccgcggtggtcgtgtcgtcgccggaggcggcgcgggacgtcctccggagccaggacctcgcgttcgccgaccgctacgtcagcaccaccatcgccgcgatctacctcggcggccgggacctcgccttcgcgccctacggcgagcggtggcggcagctgcggaagctctgcacgcagcggctgctgaccgcggcgcgggtgaggtcgttccggtgcgtccgcgaggaggaggtggcgcgcctcgtgcgcgacctggcggcctccgccgccgccggcgaggccgtggacctcaccgcgagggtggccgagctcgtcaacgacgtcgtggtgaggtgctgcatcggcgggcgccggagcaggtaccgcgacgagttcctcgacgccctccgcaccgcgctggaccagacgacgtggctcaccgtcgccgacgtcttcccgtcgagcaagctggcgcggatgctcggcacggcgccgcggaaggctctcgcttcccgcaagaagatggagcgcatcctggagcagatcatccaagaacggaagcagatcaaggagaggagcaccggcgccggcgccggcgccgacgacgaggcggcggcggccggaaacgagtgctttctggacgtgctgttgaggctgcagaaggaaggcgacacaccgatcccaatcacaaacgaaaccatgatgttgcttctacacaacatgttttcagcaggcagcgaaacatctagcaccactctaaactggactatggcagagctcatcaagtcaccaagagtaatggcgaaggtgcatgatgaggtgaggcaagcctttcagggaaagaacactattaccgatgatgatgttgccaaattgagctatcttaaaatggtaaccaaagagtccttgagaatgcattgcccagtgccgctcttaggcccccgaagatgtcgtgagacatgcaaggttatgggttatgatgtgcccaagggcactatcgtgtttgtgaatgcatgggcaatatgtagggattcaaagtattggaagagtgccgaggagtttaagccagagcggtttgaaaacataagtatagactataatggaaataactttgaattccttccatttggatctggccgtagaatatgtccaggtataactcttggtatggccaacgtagaattccccttggctagtttgctttaccattttgattggaaacttcctaatcaaatggagcctgaggaaatcgatatgagagaggcacctggacttgttgggcctaaacgcaccagcctatatttgcaccctgttactcgtgttgctccaagcagtgtttag</cdnaseq>

Protein Sequence

<aaseq>MEDKLLLLLALAVSVLVAVVISKLVSYATKPRLNLPPGPWTLPV IGSIHHLVGSHPIHRSMRALAEKHGRDLMQVWLGELPAVVVSSPEAARDVLRSQDLAF ADRYVSTTIAAIYLGGRDLAFAPYGERWRQLRKLCTQRLLTAARVRSFRCVREEEVAR LVRDLAASAAAGEAVDLTARVAELVNDVVVRCCIGGRRSRYRDEFLDALRTALDQTTW LTVADVFPSSKLARMLGTAPRKALASRKKMERILEQIIQERKQIKERSTGAGAGADDE AAAAGNECFLDVLLRLQKEGDTPIPITNETMMLLLHNMFSAGSETSSTTLNWTMAELI KSPRVMAKVHDEVRQAFQGKNTITDDDVAKLSYLKMVTKESLRMHCPVPLLGPRRCRE TCKVMGYDVPKGTIVFVNAWAICRDSKYWKSAEEFKPERFENISIDYNGNNFEFLPFG SGRRICPGITLGMANVEFPLASLLYHFDWKLPNQMEPEEIDMREAPGLVGPKRTSLYL HPVTRVAPSSV</aaseq>

Gene Sequence

<dnaseqindica>3454..4077#47..982#aagtaatttatcaagaaggtagtagctactagctcctcgcaataccatggaggacaagctgctgctgctgctggctctggccgtgtcggtgctcgtcgccgtcgtcatctccaagctggtatcatatgccaccaagccaaggctcaacctgccgccggggccatggacgctgccggtgatcggcagcatccaccacctcgtggggagccaccccatccaccgctcgatgcgcgcgctcgccgagaagcacgggcgcgacctcatgcaggtctggctcggcgagcttcccgcggtggtcgtgtcgtcgccggaggcggcgcgggacgtcctccggagccaggacctcgcgttcgccgaccgctacgtcagcaccaccatcgccgcgatctacctcggcggccgggacctcgccttcgcgccctacggcgagcggtggcggcagctgcggaagctctgcacgcagcggctgctgaccgcggcgcgggtgaggtcgttccggtgcgtccgcgaggaggaggtggcgcgcctcgtgcgcgacctggcggcctccgccgccgccggcgaggccgtggacctcaccgcgagggtggccgagctcgtcaacgacgtcgtggtgaggtgctgcatcggcgggcgccggagcaggtaccgcgacgagttcctcgacgccctccgcaccgcgctggaccagacgacgtggctcaccgtcgccgacgtcttcccgtcgagcaagctggcgcggatgctcggcacggcgccgcggaaggctctcgcttcccgcaagaagatggagcgcatcctggagcagatcatccaagaacggaagcagatcaaggagaggagcaccggcgccggcgccggcgccgacgacgaggcggcggcggccggaaacgagtgctttctggacgtgctgttgaggctgcagaaggaaggcgacacaccgatcccaatcacaaacgaaaccatgatgttgcttctacacgtaaggattaattgcttctatatacctcctttatctaaaaatacttaaaaacaaaggaaggtactccctccgtttcataaacgctttaatttaatctagtatgaaaaaacatggtaacattttcatacaaaacaaaaacatagtattaaaatgcattcaatattaaatttagtgggactaatttggtgttatgatagttgctatatttctctaaagatttgatcaaacctacttaagtttgacataaaaaagagtaaaagagagacttatagcgtggaatgcagtggatagttttttcaattaatttttcagtcggtttcttacttcattccacaatgagtgtaattctaatgtttaaattttatccaacaaagagcagcttgtcccatcaaccacttctcacttaaaattaatttctttccttttacctaaccacgtactctcccacagattttttttaaaaaaacaatacgattttaatgaaaaatcgcaaaaatataggtcggttaggcgaaatcgtacgtttagcaccctgtcgaataaccgtggttcgacagggtaccctatcgaacaactgcggttcgacaggtacctattggactgccacactttgacaggctagttggtccaagaaaaaaaaaagtacttgctacagtacctggcagggacatatccaacgggcagtgttcgataggggcgtggctacagtgacactacaatgtttttttctatttttaaaattatttaatcacatgtcgaaccgcggttgttcgataggtaccctgtcgaaccggtgctaaacttgcgatttcgtctaaccgatatatatttttgctatttttcattaaaatcgtattatttcccaaaaaaaaattcctctcccaccgatagcccatccgtattaaataatgatatatatgtcatttcccttctctactaattttccttttgaatcttagaactgctctttgtcgtagtacatagtagtatttgccaggaataacgtgaaaaattacaaatttaaataacatgaatggaaattgtagttttagtttttactgtctctcttctgttaaccttgacacagcattattttttccagtttataattttcttattttataatggcaagaggactcaaatgaatgtactcatatttaatttcaagttagaattagaacattgcttgtttaaccacaaggaaaaatatgtgccaattgataaacatatatatggtcctaatcgttagaagatcatcactgtgttgtatcctcgttcaattagaatgaggtttatgtggcctatgagagctgtgtacacatcatcttgctagtttatccagagtgaaaccaacttatatgagcttgtccctccaatcatatcacttcggggttaattctattacacaaggcgagaacaaaagcgtaagtgtggtgatattgagtgggctggctattggatggactgggttgtgcggttccaaaggatggattgtacacaccttgaacaaatttatttaatgctcaaataatctcttttgaaattaaaattacagttacttaatatgaggtgtaagaaatctagaataattagtaatacaattctaggttatttgtccacaaatttaggtgagtgagggggtaagaaacctagctagaaattccatagtggtggatgcgtatttataaagtgactgatgcgcaatatttttattgttgttattattattattatttcttttctgaaaagctactaatccaaacaaaagttatacattctcattctaaagtgcagtttataaaatctgagcacataaagtagctagactgctactactatttactactgttaggctgagttctttcccaactcacctccctcgttttctacgcacacgcttttcaaactgctaaatagtgctttttttttaaaaaaaaaattctctatgaaagttgctttaaaaaatcatattgatctatttttcaaaaagaaaataaatacttaattaatctcatgtgctaatggaccactctattttccgtgcacaagagatttgttctcaacacacccaaacgaacacagccttaattgcagaatatgaaatttgtgggctagtatacctctcatcaacgcccaactctagctccaaaagaatttccagagctatatagacacgtataccttaaagaattactggagccaataatttctcaaatagtagtaacaaacataatgtatgtttgctgaagcccctcaaagtaagaaaaagaagtctaacttagacaaacgtaaaagtgcatcttttataaccatacaattataatagataaaaaaagttatattgtataagggttgcaagctaggtacatgatatatatacttgtgtatgtctggactgtatattctacaaatttatatgattcattgataatcaagaatcatggtactgataaataacaaaatcactgcagaacatgttttcagcaggcagcgaaacatctagcaccactctaaactggactatggcagagctcatcaagtcaccaagagtaatggcgaaggtgcatgatgaggtgaggcaagcctttcagggaaagaacactattaccgatgatgatgttgccaaattgagctatcttaaaatggtaaccaaagagtccttgagaatgcattgcccagtgccgctcttaggcccccgaagatgtcgtgagacatgcaaggttatgggttatgatgtgcccaagggcactatcgtgtttgtgaatgcatgggcaatatgtagggattcaaagtattggaagagtgccgaggagtttaagccagagcggtttgaaaacataagtatagactataatggaaataactttgaattccttccatttggatctggccgtagaatatgtccaggtataactcttggtatggccaacgtagaattccccttggctagtttgctttaccattttgattggaaacttcctaatcaaatggagcctgaggaaatcgatatgagagaggcacctggacttgttgggcctaaacgcaccagcctatatttgcaccctgttactcgtgttgctccaagcagtgtttaggtggcaacacatacatatctgaagtaatgctatcatagtatgttgccttttctcccttctatcgaagttgatgggacatatccccaattatcgcaataaatttggatatctaaattgctgtttacatttcaaattcgctaaatttgtattgtgcggagggtatataccatgtcaaacctcaaatttgtactcagtgtatatgtattttgataagggcgccttttggacgcaatttcgcaatgtacaccaagaaatattactacatgaaaagacaaggtttgtatactt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0440000, RefSeq:Os10g0440000