Os02g0721800

From RiceWiki
Revision as of 02:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0721800| Description = Similar to Phosphatidylinositol transfer-like protein IV| Version = NM_001054498.1 GI:115448366 GeneID:4330561| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0721800

Description

Similar to Phosphatidylinositol transfer-like protein IV

Version

NM_001054498.1 GI:115448366 GeneID:4330561

Length

6094 bp

Definition

Oryza sativa Japonica Group Os02g0721800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30837579..30843672

Sequence Coding Region

30838142..30838162,30838658..30838732,30839451..30839812,30839940..30840081,30840274..30840393
,30840486..30840584,30840698..30840797,30840890..30840939,30841020..30841121
,30841195..30841272,30841992..30842258,30842413..30842512,30842604..30842919
,30843013..30843019

Expression

GEO Profiles:Os02g0721800

Genome Context

<gbrowseImage1> name=NC_008395:30837579..30843672 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30837579..30843672 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagagagcaatgtcgacggcatcgaaatatcagctagtaacgatgagaggagggacagaggggacgctgagatttcggaggatgagccaaggcagacgaggatacggtcgttgaagaagaaggcgctgcatgcatctacgaggctgacgcattcgctgaagaagagagggaagaggaaagtgggctgcagagtgccgaagatcacgatagaggatgtcagggacgcggaggaggagcaggctgtcagctcttttcgagaggttttgtttgccagggacatgctgcctgagaggcatgacgattatcacacgatgcttagattcttgaaagctaggaaatttgatgttgaaaaggcagcacatatgtgggctgacatgctgcactggaggaaggatttcgggactgacacaattttggaagattttgaatttcatgagctagaggaggtgctgcagtattatccccatggttatcatggtgttgacaaggaaggaaggcccgtctatatcgagttgcttgggaaagttgaacccagtaagcttgtacaaattacaacagtggaacgctatattaaatatcatgtacaggaatttgagagagcattccgagagaagtttcctgcatgctcaattgctgctaaaaagcatattgatacgacaactacaatactggatgtccacggtgtgggttggaagaactttagcaagatcgcaagggatttggtgcgctgtatgcagaaaatagatggtgattattatcctgagacactacatcaaatgttcattgtaaatgcggggcctggttttaaactgatctggagtactgtgaagggacttcttgaccccaaaacctcgtctaaaatccatgttctaggaacaaaataccaacacagacttcttgaagctattgactcaagccaactaccagagtttcttggtggttcttgcacgtgctctagccagggaggatgcctgcgatccaacaaaggcccctggagtgatcctttaattatgaagcttgtacattgcatggaatcatctgcgttgaaggacattggccaagtatctgatatagaagaagcaattacaggctctgtaagattgcgtgctctcaagttaccagaaagaattagttatacatcaaatgctgaatctggttcagatgttgatgatcttggatctcctataggacaggaagattttgagtatcatagtttggctccagttcatgaggaggccagggagtcaggatcaacatgcagtggttctgatgataaagttgttgagacgaatacaagatacaaccctcctggaaatggatcgggacagtacagcgcaagacaaaatccctcaataaacagagtttcgcctgagccagcaggtcacgtcccaaatgatggtgaaggaaatgcagatcatgggatcttgaaatatatttctaaaaaagttctcggtgtaattcttgaagtactctcttttttgcgtattttcatccgtcatcgacaacagttggaaaatgtcccccagcatactacaacagtgcacagtaatcaggcagatcttcagataattaaggaagatcgtgtaaatccttgtctagagcgtcttgaaagacttgagacaatgtttaatcagctcagcagaaagcctccagagattccacaggataaggatcgtgctatacaggattcttttgacaggataaagtgcattgaatttgatctggagaagacaaagaaggtattgcatgcaacagtgattagacaaatgcagatggctgagacattggaagctgtaaaggagtccgatcttaggagaagaaaattttgtacataa</cdnaseq>

Protein Sequence

<aaseq>MSESNVDGIEISASNDERRDRGDAEISEDEPRQTRIRSLKKKAL HASTRLTHSLKKRGKRKVGCRVPKITIEDVRDAEEEQAVSSFREVLFARDMLPERHDD YHTMLRFLKARKFDVEKAAHMWADMLHWRKDFGTDTILEDFEFHELEEVLQYYPHGYH GVDKEGRPVYIELLGKVEPSKLVQITTVERYIKYHVQEFERAFREKFPACSIAAKKHI DTTTTILDVHGVGWKNFSKIARDLVRCMQKIDGDYYPETLHQMFIVNAGPGFKLIWST VKGLLDPKTSSKIHVLGTKYQHRLLEAIDSSQLPEFLGGSCTCSSQGGCLRSNKGPWS DPLIMKLVHCMESSALKDIGQVSDIEEAITGSVRLRALKLPERISYTSNAESGSDVDD LGSPIGQEDFEYHSLAPVHEEARESGSTCSGSDDKVVETNTRYNPPGNGSGQYSARQN PSINRVSPEPAGHVPNDGEGNADHGILKYISKKVLGVILEVLSFLRIFIRHRQQLENV PQHTTTVHSNQADLQIIKEDRVNPCLERLERLETMFNQLSRKPPEIPQDKDRAIQDSF DRIKCIEFDLEKTKKVLHATVIRQMQMAETLEAVKESDLRRRKFCT</aaseq>

Gene Sequence

<dnaseqindica>5511..5531#4941..5015#3861..4222#3592..3733#3280..3399#3089..3187#2876..2975#2734..2783#2552..2653#2401..2478#1415..1681#1161..1260#754..1069#654..660#atggaagcgtaagcgcgaggagagagcggatcaaacaaacgaaacaaaacaaacgctcgcaccgaactcgaatttcctccgcgttgccctcgccctcgccctcgccgcctcgaatcctccctcgccgccgggggtatcccccgttggcccgcctctccgatccgagcctgatcggaggagtcccgcgccgccgcagctggtggatgcgtgcgtgccgctagctgcagatctcctcctctcccggcgacgaggtacggatcgattcggataagggcgcagttcgcccgcggatcgggggcggttggatctagctagctgcttgcggtcgcgtgattcccgaggcggttgggggggttgggtgcggctcccgctggatctcgcggcgggagcatttattgcagattgaacggatcactttttttttgggggctttctggggggatcgggttttagctgtttccatggcttatcgttgaatgaatgtgcggcgagttcgttattgttctagtacaactctctgaattgaattttaatctgtattaagtctctggcagcgtctaggcccgtgtggttgtgactaagtatcggatcagcgatctttgagaaaaatacagagtgagaagtctgatcgtctgagggtgcatttgtggagaatgtcaggtatgaagttgtagattatcgtgctggtatgtaggtttagtggataatggccaatgcagctcatgctctctggattgcgttgcgttgttgcagagagcaatgtcgacggcatcgaaatatcagctagtaacgatgagaggagggacagaggggacgctgagatttcggaggatgagccaaggcagacgaggatacggtcgttgaagaagaaggcgctgcatgcatctacgaggctgacgcattcgctgaagaagagagggaagaggaaagtgggctgcagagtgccgaagatcacgatagaggatgtcagggacgcggaggaggagcaggctgtcagctcttttcgagaggttttgtttgccagggacatgctgcctgagaggcatgacgattatcacacgatgcttaggttagcatcagttgaaacattctaatataagtattttcggttgtcgaatgcccacttactgattgttcattctgatctatatatcctgcagattcttgaaagctaggaaatttgatgttgaaaaggcagcacatatgtgggctgacatgctgcactggaggaaggatttcgggactgacacaattttggaagtaaagacactgtctattctttgagttgatctgaaaactgtactacactttgatgcatttttactaggactctatggatatgaacaattgcttcccacataatttctttactacaacatgtatactgattgcatctaactcttctctgttaaaggattttgaatttcatgagctagaggaggtgctgcagtattatccccatggttatcatggtgttgacaaggaaggaaggcccgtctatatcgagttgcttgggaaagttgaacccagtaagcttgtacaaattacaacagtggaacgctatattaaatatcatgtacaggaatttgagagagcattccgagagaagtttcctgcatgctcaattgctgctaaaaagcatattgatacgacaactacaatactggatgtccacggtgtggtatgttcaattgtccatcgccacctaactatgtcttcttcttgctagcagttgtctaataaaattgacaaagaatatcagtcctacattaagatactttcatgctcacaataaagacatttgcctgaactaacaatttcttaaggtgttgatacattaaagacatgaagttatgaaaccatcaatttggaaattagctttcatcattgtttattaaacaccaagaacatgtaaaaataaatatccttcatgatattgagttgagaatcatgttttaaaaggaaagcattgtcctagtcaaatttgtatgatgtttggagcaactgagaaagaacaccaaaatattttgttttgagaaagaacaccaaaatattttgttttgccaattccaaattaatgattgggaatcttatctgatccatgcaaaccaaatgtatagtggattttattctaacacttgggtggaatttcggaagggtttgggataaatccactcaatgcaagataagaatgccatgagtagatctgtatacgttcagacaattagtttccttaaacatatgcacatatgacccaggatagttttccttttgataatagactattttcttcaagcagtacctttctttacaagtaatgtagatctctatcctggttgcataatagtggaaaatggttcatagcattttagcttgttccttctgttttatgtgtattagggttggaagaactttagcaagatcgcaagggatttggtgcgctgtatgcagaaaatagatggtgattattatcctgaggtaggtgttacttatgaaatttaggcctattttgtaatcatgctgactaccaagcttgccctaaatcatgcagacactacatcaaatgttcattgtaaatgcggggcctggttttaaactgatctggagtactgtgaagggacttcttgaccccaaaacctcgtctaaaatccatgtacaaacttttgcaagctttgaaagttcacttttcaccttgtgatctttgtgtgtgctcatacctactatttgttacaggttctaggaacaaaataccaacacagacttcttgaagctattgactcaaggttggtgattgtgatcttatatgttattttgatttcaaatgtaagatttgttggtgttctgtggtgcctggcttaccaacatatatatgcagccaactaccagagtttcttggtggttcttgcacgtgctctagccagggaggatgcctgcgatccaacaaaggcccctggagtgatcctttaattatgaaggtaaatctctaaatttgccatttttctcttagcatatcatagtctgcacagtgcagcaggagttaaatttgtaactctgctgccactgttcattaatttaattccaattgtagcttgtacattgcatggaatcatctgcgttgaaggacattggccaagtatctgatatagaagaagcaattacaggctctgtaagattgcgtgctctcaaggcaagattaccaattgttcaatctatgaactctcatatgctcagttgtcccatcttctattttgacattttatttgatgctacttctttcagttaccagaaagaattagttatacatcaaatgctgaatctggttcagatgttgatgatcttggatctcctataggacaggaagattttgagtatcatagtttggctccagttcatgaggaggtctgttcttggtccttttgtgctaccactatttaagaacatctgtctgctccatcttaaactacgcatttactacttcggttgtcatgaaaagtagcttagatgttctttgcagttaccatgtgcctgcatatagcatgcatcaccaatggtgttccataacagacttaatctcctggttttatcatgcaggccagggagtcaggatcaacatgcagtggttctgatgataaagttgttgagacgaatacaagatacaaccctcctggaaatggatcgggacagtacagcgcaagacaaaatccctcaataaacagagtttcgcctgagccaggtatccagtcaaaatctgcatgcacgagttattttctaaaaaacaattaattcattaatattttgattcacttgtctaagtaaggagatcagcccctctgattcttgaaactatgaattgaaactagcaggtcacgtcccaaatgatggtgaaggaaatgcagatcatgggatcttgaaatatatttctaaaaaagttctcggtgtaattcttgaagtactctcttttttgcgtattttcatccgtcatcgacaacagttggaaaatgtcccccagcatactacaacagtgcacagtaatcaggcagatcttcagataattaaggaagatcgtgtaaatccttgtctagagcgtcttgaaagacttgagacaatgtttaatcagctcagcagaaagcctccagagattccacaggataaggatcgtgctatacaggattcttttgacaggataaagtgcattgaatttgatctggagaagacaaagaaggtaatggtgttttaccacagaagggtgttctgtaattgaattatggtgctgacttttttttttgtaggtttaaggttagctctctgtcatgtgcttaccacagaagggtgttctgtaattgatagatgaatttctgttaaatagttaagagaattttgaaccaacatagttgaagtcaactatgaaattgtggctttatttatttgaatatgcagatttaagatacttccaatccactcctgagacttttgatcacactatccaataggaactgcatgggctatgctcgtccaacctttacaagttaaacattggagatagaaggaaaatgcaatgcagcctatttaaatccaaaattttaacaagagatctcccaagggccattcgttttttgtacttattaaaaatgtgctttataacattttcaaatcttacatcgctatcattggttatgttcatagcagtcttaatatgcaggcttgcaattatactaacctgccatacgtaaatccttctatgggtcagatcctaggagtctactagagtgggcatgttaatatatagttgtttgcttgggtgtagtgcatactgaagttataattcattggatatgtgttcattacctttttgcagtttagctgataatattagcttcctttgttgttgtatttcattgttcgtctatttatatgtgatgtttttgaatttgtttgttcaggtattgcatgcaacagtgattagacaaatgcagatggctgagacattggaagctgtaaaggagtccgatcttagggtgagcatatcatatctctatctctactattataaaaattgaagatgtttttgttggtattttagtacgtcatccgtgtttgaatcggtttttatgtttgtttgcttttggaaatatagatccgtgtttgagttggattttaagctcgttttgcttttgaaaatacaaaatgagttgtataaggaatctctttaaaaaaactctcatgctaacttgagatgaaatacatactcctaattgcagctcatgatttttttaaaaaatatatccaagcgaattcccacagtgaattttagttatgaaataattacaatatttcccacgttgaatgcatttgttcttcatattgtatgatttgattggcctctaggttcaaatactactgcgtgtatctatgtagcacagactatatttgtatttattctgcagcttttatttcttggtgttcttgtcagacgctaaattcctttattttatttttcttgtctgttgcagagaagaaaattttgtacataataaacttagcagcaatgtacaggaacaagaaaagaagagtcgacgacttactaatgccggcattccaacataaaactaaacttcattgctttgtacatggttacccttttctcactttttttttggtctatcaaaaaaccgagcaaatcttactctgaataagtacagagtggtgacccgaggcaaactgagaagatagtcaagaaagaccgtgctggaagtcacttaacatagtccagcttataatagtccaaaagggatattctaaaagagccaatgcacagcttatttatgttccatcgagcctcctgatctgctgtatgcatctcatcaatgccttgtgcatttttcattttcagaacagtttgaggcaatgggccggaattcatagttcttcataccctttttttggttgatatggtcaatacatgatcaggtttttcattgctttgcctcccttcaaatgtaaagtgtaaatatatgactgcactgcttgctgctgcaagatacttataccagattgacatggtgaaacggccaataaatgccaaaatttaccgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0721800, RefSeq:Os02g0721800