Os02g0722400

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Revision as of 02:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0722400| Description = Similar to Amino acid transporter c (Fragment)| Version = NM_001054501.1 GI:115448372 GeneID:4330564| Length = 6118 ...")
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Gene Name

Os02g0722400

Description

Similar to Amino acid transporter c (Fragment)

Version

NM_001054501.1 GI:115448372 GeneID:4330564

Length

6118 bp

Definition

Oryza sativa Japonica Group Os02g0722400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30878812..30884929

Sequence Coding Region

30878814..30878853,30880281..30880517,30881128..30881219,30882798..30883017,30883538..30883671
,30883792..30884016,30884374..30884784

Expression

GEO Profiles:Os02g0722400

Genome Context

<gbrowseImage1> name=NC_008395:30878812..30884929 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30878812..30884929 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctctcgaattcctcgtcgtcggagattgacaagagaacaggaacggcatggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtggcgcagctcggctgggtcggaggaccggcggccatggtgctcttcgccggagtgaccctagtccagtcctccctgctcgccgactgctacatttttcatgacccggacaacggcgtcgtcaggaacaggtcctacgtggacgctgtgaggttttacctaggtgagaagagccagtggttctgtggctttttcctcaacatcaactttttcgggagtggggtggtgtacacactcacctcggccaccagcatgagggcgattcagaaggcaaactgctaccaccgggaagggcacgacgcgccgtgctccgtcggcggagacggctactacatgctcatgttcgggctcgcgcaggtggtgctctcgcagataccgggcttccatgacatggcgtggctctccgtcctgtcggcggccatgtccttcacctactccctcatcggcttcggcctcggcgtcgccaaagtcataactaatggagtgatcaagggaggaatcggggggatcgccatggtgtccgcgacgcagaaggtgtggcgagtctcgcaggcgatcggggacatcgcgttcgcctaccccttcgcgtcggttctgctggaaatcgaggacacgctgaggtcgccgccgccggagagcgagacgatgaggacggcgtcgagggcgagcatcgcggtgaccaccttcttctacctctgctgcgggtgcttcggctacgcggccttcggcgacgccacgcccggtaacctcctcaccggcttcggcttctacgagccctactggctcatcgacttcgccaacctctgcgtcgccgtccacctcctcggcggctatcaggtgtactcgcagccagtgttcgcggcggtggagcggcggatgggcggcgcgggggcgggcgtggtggaggtggcggtgccggcggcggtggcgtggccgtcgcggtggcggcgcggctgccgcgtgaacgtgtacaggctgtgcttccggacggcgtacgtggcggcgacgacggcgctggccgtgtggttcccctacttcaaccaggtggtcgggctgctcggcgccttcaccttctggccgctgtccatccacttccccgtcgagatgtacctcgtgcagaagaaggtggcgccgtggacgccgcggtggctcgccgtccgcgccttcagcgccgcctgcctcgccaccggcgccttcgcctccgtcggctccgccgtcggtgtgttctcctccaagaccagctaa</cdnaseq>

Protein Sequence

<aaseq>LSNSSSSEIDKRTGTAWTATAHIITAVIGSGVLSLAWSVAQLGW VGGPAAMVLFAGVTLVQSSLLADCYIFHDPDNGVVRNRSYVDAVRFYLGEKSQWFCGF FLNINFFGSGVVYTLTSATSMRAIQKANCYHREGHDAPCSVGGDGYYMLMFGLAQVVL SQIPGFHDMAWLSVLSAAMSFTYSLIGFGLGVAKVITNGVIKGGIGGIAMVSATQKVW RVSQAIGDIAFAYPFASVLLEIEDTLRSPPPESETMRTASRASIAVTTFFYLCCGCFG YAAFGDATPGNLLTGFGFYEPYWLIDFANLCVAVHLLGGYQVYSQPVFAAVERRMGGA GAGVVEVAVPAAVAWPSRWRRGCRVNVYRLCFRTAYVAATTALAVWFPYFNQVVGLLG AFTFWPLSIHFPVEMYLVQKKVAPWTPRWLAVRAFSAACLATGAFASVGSAVGVFSSK TS</aaseq>

Gene Sequence

<dnaseqindica>3..42#1470..1706#2317..2408#3987..4206#4727..4860#4981..5205#5563..5973#agctctcgaattcctcgtcgtcggagattgacaagagaacaggtcaggcctaatcatcagctaatccttcgcaagattgctctttcattttttttttgtttgcttaaatacctgcatcgagatcatccgtcacaaggtttccaatcttccagctctgacttctgaactgtttgtgctgtgatgatcttcctgacttctgaattgtctgcgttgtgatgatcttcctgtgtagctgatcttaattagcaccagctacagctagctagtaaatttttccccgtttgatcgatctatattgctggattacatatatccctacattagaaaaacacggccaaggtcgcatatatccggttagatgtagatgcttcgttaaaaaaaaaccttgtctaaaacaatatatataaaaaaagagaaaaacatggccagtcctcggaaaaaataacaaggcccagttactgtggtgataacaacagagacggcatatcactgtacacattaatttctgattatgtttcaacgtggctcgtacaaattaattaaggtgcatagtcacattgctgtgattgcccgtcaggtcactgtctcgtaacaattaaccactacgatggactgcaattgcgtgggatagatttgtttaaaagtttgcaagatcaacaagaaaacctctagcatctaatagttaatatttttttaggatatcataaacatctgaaatgacaacgggaaatagctcaaagcaaaatacgactttttttttcaatataatggaagcaaattacgacatgaagaaaacaattcaattgtgagccttatcagatagttacattggtatgaaaattttaaaaagaaaataacttaaccggcaaggacatgtctgtccccaagactttttactaagaagagaaaaccttaaccaaaacggccgagaaaagctacgaaaccttagcccccacacaaggactcccccatggattgattcttaacgtgtgctttgatatggttaactctaactttatagatacacaatcagagttgcgcgttgggccttttttaacgccgatcattcatctttgcacgaacaaattatcttaccgtgttacatattaatgtctgagttcttagaaaacactaatccagtccatgtatatatgaacaagcatatcaagttatgagcagccgcccaacacctcatatgcttgcacataggacacgagaaactgatcaattggaaggtaaagacgtcttggatcatgcgtgcgctctgtgagggaccatgagtactcgaacaatacatacaaagtgaaaacttttagctagaaaaaaagagtcatatccagcagagatatacccatatgtgccaaatataatagcaggtcacgctatatgaacaagaggtccagctccagtcatcatgagtcatgaattgcatatgcgagaggctataattgatgggcgggtgcttgcaggaacggcatggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtggcgcagctcggctgggtcggaggaccggcggccatggtgctcttcgccggagtgaccctagtccagtcctccctgctcgccgactgctacatttttcatgacccggacaacggcgtcgtcaggaacaggtcctacgtggacgctgtgaggttttacctaggtgatcatctccccaaatttttttttccaaattctagattctagatttttgtttgcacgtttttcaagctactaaacgatatgttttaattttctatataatttttttcatgaaatacttttctataaacaagttttcaactttggaatgattaattgattcgtttagttatactcaaatggctatcgtaaagatgatattatccgttgatttccgctatctcaaaaaggaccatggttttactgtttgcacgcacatgaagtagaatcggttgatatcatacagtacagtaggtggtatactatatggcacactgacaacaattgtgtttagtaaagaacattagagaaaaataatagaaatgcaatcgtcagaagttgcgattattgtcaataaaattaatgctgtctctttgcctcacaaggggaagtcgatgtacaagtgcgtacgggtagataggacgaacagaaaaagaaattgatcgatgatacacggttcatcgaccgatctgtactttattaatagttaaaattatcaaattgtgccattttatgctaatgacttaattaatgtcactactgacggtggatggcacgaacggtggctgcaggtgagaagagccagtggttctgtggctttttcctcaacatcaactttttcgggagtggggtggtgtacacactcacctcggccaccagcatgaggcaagttcatttttcatgtgaaactagcatcttgaacacgcgactgttacctctctatctactaaatatatttatatgctatttatgttaatagacgtaaatgtttaataacaattaataataaatatgtttttaacacattttttaagtagtgcaactataacattaattataacattaatggatttatatatcttaatttgtcattaagaatattatcgtaacaacgaataatttatcatatattaccaccgccattacctcctacaatatctaaatgcgccatttgtagtaataatgtaaatagccacatctgttacgtgttgcaattctatcatcaccagttgataagtatctatacatgtttttatcataaatcttataatcatatggtttaaatcaactttaaaaaaatattatgtcctccatgtcacatgattttttaatttaagatgtggtgaagtaattgatagtattagattatttagctattcatattttcacagatacttgttattgttgatataatagaattactgttgaatactcataggtgattttttaaaaggataattttgaaggtatttttcactctcatatctttgttaccacatattttatcggatgtgcttgaagggtctagaacatcccctgacactatttgcttttttgactgatttttctctattttgatccaacggttctcttcatttaaatcgtgcatccaacggttcatatttatttgttgatgtggctcattctagtgggatgttgatatccccttttcactaatgtacatatgatctctctcgctttctgtcattctgtgccttgcgtggcaaacatctaaccacggctttattagttgtaatgcagtcgtaagatgaggaaaagattttaactaacatgattagataaagtttattttatctactaccttctgccgttttaaaatatagcaatataaaactgaatgaaatatatctcaatttaatgaatgtggacaaggagctgtccaaatacgtttgagacggagtaggcactgaatggtgatgctgtcgttgtcctttaataatctcggtagaaggtatagtagctagatcactgttcagtggtaatatacagtcgcaatcaatgattatttaattgatggtgagggagtgtgctgatacctaacatagataaaggtccttttcaaatggacctcgcgtcgcatttgttgcatttgtagtacgggcaatgttgcatttgtagtttttttttccttcttttcttaatcagaacacacaactaaggtctcctttaatttgaagaaaaaacataaaaattttataggattttttttcctatagatatctttgtttagagaagggtatttttacccggcctctgcatccaactggatatatacagccattgaaatagggaacttacccccgcaaacaacccaatctgaaatttgttcctatggagatttgaactcagaaccttaggtactaatcaggtcactgcaaccactaggctacatgcgctattctagttagcaatgaactcggacattttctatgggttttgcagggcgattcagaaggcaaactgctaccaccgggaagggcacgacgcgccgtgctccgtcggcggagacggctactacatgctcatgttcgggctcgcgcaggtggtgctctcgcagataccgggcttccatgacatggcgtggctctccgtcctgtcggcggccatgtccttcacctactccctcatcggcttcggcctcggcgtcgccaaagtcataagtacacacgcatttaacagtattcattaatgctagtagctctcactttcattacaactgatgcgaaatggtacgatattgggaatgtggattttcatccttcggcaggatatccctttattgtttgcatgtcatctaaatagttattaaaaaaattttaaaaaatttgataatatagattaatatgaaatatatcaccccacaaacatacaagatcaaattcaactttgtacatgttgcaacaaaaagaacaaattaaactgaaaatagttatcgtacattcgcagctatatttaatatttttgttataacttgtagaagttgaatttaaacttatatatttgtggagtaatatctatgttaccatttttaaaaaaaaaattagtgactatttaggttgcatgcacgaaaagaaaagatatcccctcaagggataaatatcggataatgcactactccaacgtacgtacagtacagctaacaacgcgatcgaatgtggcttaattcgtttttttgttcagctaatggagtgatcaagggaggaatcggggggatcgccatggtgtccgcgacgcagaaggtgtggcgagtctcgcaggcgatcggggacatcgcgttcgcctaccccttcgcgtcggttctgctggaaatcgaggtaattcgtgcatgctatgatgcgtatgtgcaatgcgcgacaagctaggcgatcgaacggcgatgagccatgcattgcatgagctgagcagctagcaatggcgggtgtttgtggtgaaaggacacgctgaggtcgccgccgccggagagcgagacgatgaggacggcgtcgagggcgagcatcgcggtgaccaccttcttctacctctgctgcgggtgcttcggctacgcggccttcggcgacgccacgcccggtaacctcctcaccggcttcggcttctacgagccctactggctcatcgacttcgccaacctctgcgtcgccgtccacctcctcggcggctatcaggcaagaacagggtttgaaatttcggttcgaaatttcgctccccaccgaaatgctcatatctcacccgaaacttttgatttttttgcaaatttttatgaatttagtcaaattttatttaaatccatttaaaatcagtcaaaaattcaaaaaattccgtacggaagaaccgacccccccccccatccagcagaaaccctagtttcaaaatttgaaaccctgggcaagaagtgccactccacatgtcctctcctcgagacccctgactctgataccatattgagttgtatgcaccgatcaattcaattcaaaaacttaaaccgatgagaaaagacgaacaattcacacgtacgcatgcaggtgtactcgcagccagtgttcgcggcggtggagcggcggatgggcggcgcgggggcgggcgtggtggaggtggcggtgccggcggcggtggcgtggccgtcgcggtggcggcgcggctgccgcgtgaacgtgtacaggctgtgcttccggacggcgtacgtggcggcgacgacggcgctggccgtgtggttcccctacttcaaccaggtggtcgggctgctcggcgccttcaccttctggccgctgtccatccacttccccgtcgagatgtacctcgtgcagaagaaggtggcgccgtggacgccgcggtggctcgccgtccgcgccttcagcgccgcctgcctcgccaccggcgccttcgcctccgtcggctccgccgtcggtgtgttctcctccaagaccagctaataattgaaatgcatcagctcgatcagcaaatgaatcgaagaaagatggtctgtaaatatcaaaggaagtgttaatttgttcttgtatggagagagcatttatgtacagatcggtaaaattaaatgcgcaaaatggcacttaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0722400, RefSeq:Os02g0722400