Os10g0441800

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0441800| Description = Similar to RAB5B| Version = NM_001071227.1 GI:115482197 GeneID:4348725| Length = 4262 bp| Definition = Oryza sativa...")
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Gene Name

Os10g0441800

Description

Similar to RAB5B

Version

NM_001071227.1 GI:115482197 GeneID:4348725

Length

4262 bp

Definition

Oryza sativa Japonica Group Os10g0441800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16326511..16330772

Sequence Coding Region

16326539..16326716,16328491..16328564,16328689..16328772,16328886..16328980,16329169..16329274
,16329963..16330052,16330166..16330252,16330406..16330444

Expression

GEO Profiles:Os10g0441800

Genome Context

<gbrowseImage1> name=NC_008403:16326511..16330772 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16326511..16330772 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcgtgtccccgagcagctgtcgcacagaagcagttgcaacctgcgagcggaaacccacctccaccccgtcgccggcctgccgccgccgccgccgccgcttgccctcctccgccttactcggcctccggcgcctcctgaccccccggccatgggttgctcttcgtctctgccagctaataatgctggaggggtaggtactatcagcaacgagaattctggtactgatctgaagaacttgcgagtgaagttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtccgtggtcagtttgaccccacttcaaaggtgactgttggtgcatcatttttgtcacaaacattggcgttggaggattccacaacagtaaagtttgaaatatgggatactgctggtcaggagaggtatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtatgacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggaacttcagaaacacggtagtccagatatgatcatggctttggttggaaataaggctgatctacatgacaatcgtagtgtatcctctcaggatgcacaagagtatgcagagaggaacactatgtttttcatcgagacatcagcgaaaacggctgataacataaaccaactattcgaggaaattgcgaagaggttgcccaggccaacaccatcctga</cdnaseq>

Protein Sequence

<aaseq>MLRVPEQLSHRSSCNLRAETHLHPVAGLPPPPPPLALLRLTRPP APPDPPAMGCSSSLPANNAGGVGTISNENSGTDLKNLRVKLVLLGDSGVGKSCIVLRF VRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQERYAALAPLYYRGAGAAI VVYDITSSESFNKAQYWVKELQKHGSPDMIMALVGNKADLHDNRSVSSQDAQEYAERN TMFFIETSAKTADNINQLFEEIAKRLPRPTPS</aaseq>

Gene Sequence

<dnaseqindica>29..206#1981..2054#2179..2262#2376..2470#2659..2764#3453..3542#3656..3742#3896..3934#attgcaagccttacacgtgaccctgcgcatgctgcgtgtccccgagcagctgtcgcacagaagcagttgcaacctgcgagcggaaacccacctccaccccgtcgccggcctgccgccgccgccgccgccgcttgccctcctccgccttactcggcctccggcgcctcctgaccccccggccatgggttgctcttcgtctctgccaggtcgtcgctcctcccccaccaacggatgaaaatagttttttttttctttcactttcttgttttgcttgcctacttggaccttggatctttccttctgcttccggcgatgctgctgcttgtgggtactactgtcagctctgaaagctctgaagaggcagtaggattgactgtgttgactgttagaattagtggatggagaggttgggtcaacgctggtttggttttgggtgtaaaatcttggccgtggcattgtccagcggtaaaatttcctgattgatggtgttttgatccgtattcagtacatgtggtcctgggtttcctttcttgatttgtgattttgttccgtagcaccagaggggctgtgaatttgtgatcatggaggttggtggagcttgtaatggggaaagtttggttttttaggttggtcacctactagtactcggcttgcatgcaatttttcacgataacattgtagggaggttctcgcgtgctagatgtgaatcttctgcaaaggtgcaggaaattagaatgcaagggatatggacagaatggttttcattcggctgtatttatttgttgagtactatcaatgtggaacttggtttcatccatcaaaatcggtgtgttgtttcttgcttttttgacagaccacattccacttactgcttttaagtaaaataaggaagaaaaaccatcttgatttcatgaagcggaactttctttgttgaaaactgtccaaaagagatcctaacttctgatgtgctgacaaaaaagcatttaatgattaacacagctacaagtaggatatgttgtttaactaagagtaaatttcataaaactacagatactttgcatgatctatcacaaaactacagattttagaactagtttcacaaagctacagatttaatgtcttcgtttatcacaaaactacaggtactttgaacactatatcacaaaactatagatttaagaacttgtttcacaaaactacaggtttaatatcttcatttttcacaaaactacaggtttaatattttcatttatcacaaaactacagatttagtgtctccattctcacaaaactacacgttttaacattgcttttacctgtagttttgtgagaatggagacactaaatctgtagttttgtgataaatgaagacactaaatgtgtagcactataataaacgaatgcactaaatctatatttttgtgaaacaagttcttaaatctgtagttttgtgatagattgtataaagtacctgtagttttgtgataaacgaagacactaaatctgtagttttgtgaaacaagctcttaaatctgtagttttgtgatatattgtgcaaaatacctgtagttttgtgaaatttactctttaactaaatataggctataacaggattatggggaagaagaatagtgtgaacaaggatgctttgctatatttctttcacatgtcagccacatgtaagatgtaacataattctagtaagcttaagtgttatggagaagccttaaaaacatgtaacccctattttcatcgtgtggctctgctaaatcaaacctgatatggacatgctaaattactattccttgttgggtgtagtgttgtaatatttcacattaattcttccagctttccagcttattttattctctgttcagttactctatgttccttcagaactcaaatcagtttggcactttctggggagcaaacacatttatgtatcacatattgatgcatccattgtttttttttctacagctaataatgctggaggggtaggtactatcagcaacgagaattctggtactgatctgaagaacttgcgagtgaaggtttggacttactcactagtgtcttcataattcttttaatatttctcatctccattgttgacattaagttgaattggaatgaaaaggttcatgcccttcgtttttattttaccctattctgtagttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtccgtggtcagtttgaccccacttcaaaggtgaaacagacacttgattattttttacaggtttcctgtacagaggacacaccatttgattctccctataatatggcttattctattctgtttgttttattaaatgaatttaggtgactgttggtgcatcatttttgtcacaaacattggcgttggaggattccacaacagtaaagtttgaaatatgggatactgctggtcaggagaggtgcataaatattagaagctttgattaactattttcccaagtgcatccttgcattaactctgtactatggaatttctgtaccatcttttgcttcacatatgtcttcttcacccttgatttacattgtttgcaagcatatgtgttgctattcgttaccaaagaagtcacgagaactggttaattttcaggtatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtatgacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggtataacattttttataacattttttcctatctgctctgttgtacttatcgattgtgtctgcgtgatctgttctaaatgcatgaatgaacaagttgaatgaatttgctcaaagcttttgtaatctacatttatacaatttgtggttcgatttgtatcgctgcttctaactctgtattttaccatgggaaaattgagagtattttggaacactctattagattttaatcctggtataattggagaactcattttagtgtccattattatatttgtgtgcccttctataacccttctctctagggttgtgtttagtatgtgtgcactttgtaaacaaatagatgtatgttgaccatggtctacatttgacttcgataaatcatgtaagttctgcaagcagcatcatggcaaatgcaaaggctaactgttgctactttaatcatgcattcaagagcattttttatagataatggatatcaatccaacctctacatccctcatactacatagccaaagagcttttatctttttagataatggaaatggtttacattcccattctacagcttttattattcagtatcaactgtgggtttttttcctatgaacaaaagtctatgatgattcccaccccttttttttgtatgtggaaaatgcaacttcttcacaatttgccttttacattttcaggaacttcagaaacacggtagtccagatatgatcatggctttggttggaaataaggctgatctacatgacaatcgtagtgtatcctctcaggtgtgcatatatatatttctgaaagaatatgttgcacttttaatggagatattagatgccgaagctactataaagagatttttaactgtatcctttggttcttatctctgaaggatgcacaagagtatgcagagaggaacactatgtttttcatcgagacatcagcgaaaacggctgataacataaaccaactattcgaggtatgcatcaggagtatctccgagtcagttggcttgaacagaaactggagcatgacagtagaaaccatgattaacttttcttgcgttcaattcttgagctgttctctaaggtaaatttaggaatcatcttaacagattgtactatcatggcaggaaattgcgaagaggttgcccaggccaacaccatcctgaattcctgattggtaactgacccaggaaacaggctggcaactgtgtattgtacaacagcagtaaaagctctgtatgcacattgtttggaaatgcaacaactgtcatgtaaagcaactactttgctccttgctgcttctgtttccagcttggtcaagtgagctcagtgttttgctcagcacaagctgataggctatacgcatggccacatggtcattagcagttgcattatgctgcaggaatttaaccgtttcctgtgaaaatcttgtgaaattcctgcgttcaaaacagagcctttatttccagtgccaaattggttcttttacatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0441800, RefSeq:Os10g0441800