Os10g0442000

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0442000| Description = Similar to Lectin-like receptor kinase 7| Version = NM_001071229.1 GI:115482201 GeneID:4348727| Length = 2373 bp| D...")
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Gene Name

Os10g0442000

Description

Similar to Lectin-like receptor kinase 7

Version

NM_001071229.1 GI:115482201 GeneID:4348727

Length

2373 bp

Definition

Oryza sativa Japonica Group Os10g0442000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16334888..16337260

Sequence Coding Region

16334954..16337077

Expression

GEO Profiles:Os10g0442000

Genome Context

<gbrowseImage1> name=NC_008403:16334888..16337260 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16334888..16337260 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactccgccgcgggacaaatggcgaggggaaagtgagcgcgcgttcttcgccatggtttctttgccgtgtctggtggtgctgcttcttgccgcggccgtcggcgtcgaggccgccggcggcggcggtggtggtggagtggagttcgtgtatgatgggttcggtggcgcggcgctggcgctcgacggcatggccaccgtgacgccgggcgggctgctgctgctcaccaacgacacggacatgaacaaggggcacgcgttccacccggatccggtgaggttcgtcggcggcggcggcggcgggggcggcggcgtggtggcgtcgttctcgaccactttcgtgttcgccatcgtgtcggagttcctggacctgagcacgagcgggttcgcgttcctggtggcgccgagcagggacctgtcggcggcgatgccgcagcagtatctcgggatgttcaacgccagcggcaacggcgacgcgcggaaccggatcttcgccgtggagttcgacacggtgcgcaacccggagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactcctcggcggccgccacggcgggctactacgacgacgccacggcggcgttccagaacctgagcctgataagccggcagccgatgcaggtgtgggtggactacgacgccgccgcggcggaggtcaccgtggccatggccccggcgcggcggccgcggcccaagaagccgctcctctccacggccgtcaacctctccaccgtcgtcgccgacgcggcgtacgtcggcttttcgtcggcgtccagcatcgtgctgtgcaagcattacgtcctcagctggagcttccgcctcggcggcggcggcgccgccccggcgctcgactacgccaagctgcccaagctaccccgcattgggcccaagcctcggtccaaggcgctcaccgtcgcgctgcccatagtcaccacggcgatcgtgctcaccgccgtcgccgtcggcttcctcctcctccgccagcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggttctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgccggaggattcgggagagtgtacaagggcgtgctacctcggtcccggaccgaggtcgccgtgaagagggtgtcacatgagtcgagacaagggatgagggagttcatcgctgaggttgtcagcatcggccgcattcgacaccgcaacctcgtgcaattgctcgggtattgcaggcgcaaaggggagctcttgctggtctacgattatatgccaaatggtagccttgacaagtacctgcacgggtgcgacgagaagccgatcctcgattgggctcagaggatctacatcatcaaaggtgtcgcgtctggcctattgtatatgcacgaggattgggagcaagttgtcatccatagagatatcaaggcgagcaatgtgcttcttgatagcgagatgaatggacgactaggtgactttggacttgcaaggttgtatgaccatggagctgacccgcagaccacgcatgtggttggcaccatgggatacctggcgccggagatggttcgctccggcaaggcgaccactcgctccgacgtgttcgccttcggcgcgtttctccttgaggtcacctgcggcaggaggccaatagaggaggaggaggaggtcgccggcgccggcgctgacgacgacgaccgcttcgtgctcgtggactgggtgctcgggcactggcgcgagggcgccatcaccgacgcggtggacgccaagctccgcggcgagtacgacgccgcggaggcggagctggtgctgcggctggggctgacgtgcctgcacccgtcgccggcggcgaggccgagcatgcggcaggtgatgcagtacctcgacggcagcgcgccgctgccggagctgccgccgacgtacgtgacgttcaacatgctcgccaccatggacacgcaccagaacgtctacggggcgtggtcggtccggcggtcgtcggcgatgagcgtcgccaccgtgtctgacattggactctccggcggcagatga</cdnaseq>

Protein Sequence

<aaseq>MTPPRDKWRGESERAFFAMVSLPCLVVLLLAAAVGVEAAGGGGG GGVEFVYDGFGGAALALDGMATVTPGGLLLLTNDTDMNKGHAFHPDPVRFVGGGGGGG GGVVASFSTTFVFAIVSEFLDLSTSGFAFLVAPSRDLSAAMPQQYLGMFNASGNGDAR NRIFAVEFDTVRNPEFADINNNHVGVDVNSLNSSAAATAGYYDDATAAFQNLSLISRQ PMQVWVDYDAAAAEVTVAMAPARRPRPKKPLLSTAVNLSTVVADAAYVGFSSASSIVL CKHYVLSWSFRLGGGGAAPALDYAKLPKLPRIGPKPRSKALTVALPIVTTAIVLTAVA VGFLLLRQRLRYAELREDWEVEFGPHRFSFKDLYDATGGFKDKRLLGAGGFGRVYKGV LPRSRTEVAVKRVSHESRQGMREFIAEVVSIGRIRHRNLVQLLGYCRRKGELLLVYDY MPNGSLDKYLHGCDEKPILDWAQRIYIIKGVASGLLYMHEDWEQVVIHRDIKASNVLL DSEMNGRLGDFGLARLYDHGADPQTTHVVGTMGYLAPEMVRSGKATTRSDVFAFGAFL LEVTCGRRPIEEEEEVAGAGADDDDRFVLVDWVLGHWREGAITDAVDAKLRGEYDAAE AELVLRLGLTCLHPSPAARPSMRQVMQYLDGSAPLPELPPTYVTFNMLATMDTHQNVY GAWSVRRSSAMSVATVSDIGLSGGR</aaseq>

Gene Sequence

<dnaseqindica>67..2190#tccttttcttcctcctttttcttgtactcgcaacctctctcacgttgcgtgttggttgatgtcttgatgactccgccgcgggacaaatggcgaggggaaagtgagcgcgcgttcttcgccatggtttctttgccgtgtctggtggtgctgcttcttgccgcggccgtcggcgtcgaggccgccggcggcggcggtggtggtggagtggagttcgtgtatgatgggttcggtggcgcggcgctggcgctcgacggcatggccaccgtgacgccgggcgggctgctgctgctcaccaacgacacggacatgaacaaggggcacgcgttccacccggatccggtgaggttcgtcggcggcggcggcggcgggggcggcggcgtggtggcgtcgttctcgaccactttcgtgttcgccatcgtgtcggagttcctggacctgagcacgagcgggttcgcgttcctggtggcgccgagcagggacctgtcggcggcgatgccgcagcagtatctcgggatgttcaacgccagcggcaacggcgacgcgcggaaccggatcttcgccgtggagttcgacacggtgcgcaacccggagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactcctcggcggccgccacggcgggctactacgacgacgccacggcggcgttccagaacctgagcctgataagccggcagccgatgcaggtgtgggtggactacgacgccgccgcggcggaggtcaccgtggccatggccccggcgcggcggccgcggcccaagaagccgctcctctccacggccgtcaacctctccaccgtcgtcgccgacgcggcgtacgtcggcttttcgtcggcgtccagcatcgtgctgtgcaagcattacgtcctcagctggagcttccgcctcggcggcggcggcgccgccccggcgctcgactacgccaagctgcccaagctaccccgcattgggcccaagcctcggtccaaggcgctcaccgtcgcgctgcccatagtcaccacggcgatcgtgctcaccgccgtcgccgtcggcttcctcctcctccgccagcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggttctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgccggaggattcgggagagtgtacaagggcgtgctacctcggtcccggaccgaggtcgccgtgaagagggtgtcacatgagtcgagacaagggatgagggagttcatcgctgaggttgtcagcatcggccgcattcgacaccgcaacctcgtgcaattgctcgggtattgcaggcgcaaaggggagctcttgctggtctacgattatatgccaaatggtagccttgacaagtacctgcacgggtgcgacgagaagccgatcctcgattgggctcagaggatctacatcatcaaaggtgtcgcgtctggcctattgtatatgcacgaggattgggagcaagttgtcatccatagagatatcaaggcgagcaatgtgcttcttgatagcgagatgaatggacgactaggtgactttggacttgcaaggttgtatgaccatggagctgacccgcagaccacgcatgtggttggcaccatgggatacctggcgccggagatggttcgctccggcaaggcgaccactcgctccgacgtgttcgccttcggcgcgtttctccttgaggtcacctgcggcaggaggccaatagaggaggaggaggaggtcgccggcgccggcgctgacgacgacgaccgcttcgtgctcgtggactgggtgctcgggcactggcgcgagggcgccatcaccgacgcggtggacgccaagctccgcggcgagtacgacgccgcggaggcggagctggtgctgcggctggggctgacgtgcctgcacccgtcgccggcggcgaggccgagcatgcggcaggtgatgcagtacctcgacggcagcgcgccgctgccggagctgccgccgacgtacgtgacgttcaacatgctcgccaccatggacacgcaccagaacgtctacggggcgtggtcggtccggcggtcgtcggcgatgagcgtcgccaccgtgtctgacattggactctccggcggcagatgacgtaggccaggtgttcgacattaggactccagttgattaggatcaacttcacgttggtagcactaattgtagactgtgatttgactttttagcttgcaattagcaattagcaacagatgttatttgggggagatggcgtttgtttgttagatagtatgaaattttgatctgaacagtttcagg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0442000, RefSeq:Os10g0442000