Os02g0726700

From RiceWiki
Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0726700| Description = Basic helix-loop-helix dimerisation region bHLH domain containing protein| Version = NM_001054528.1 GI:115448426 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0726700

Description

Basic helix-loop-helix dimerisation region bHLH domain containing protein

Version

NM_001054528.1 GI:115448426 GeneID:4330593

Length

1936 bp

Definition

Oryza sativa Japonica Group Os02g0726700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31120147..31122082

Sequence Coding Region

31120423..31120583,31120671..31120848,31120955..31120993,31121072..31121167,31121247..31121314
,31121504..31121617,31121704..31122082

Expression

GEO Profiles:Os02g0726700

Genome Context

<gbrowseImage1> name=NC_008395:31120147..31122082 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31120147..31122082 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatccgcagatcactgaggccactggacctggccaagcagcgcggccgcagcagcggcaatggcacggcggcggggagtgccgtcgacggcgcgtcgccggcaggttcggactcggaggagcacgtgctaccgggcggcgtcgggacgttcagcatcaggcacgcgtccggtactccgtcgagagaagaggccggtagccatggcggcgtcaggaggagtgcgttcgcatttgcacctgcgcttcatggcgccaggatggagaatgcacatgaaacaggaggaagatctgggagtagggctcaccgtgcgccgtcgacgatgtggcaagattctgccattgatcaaagatccataggccagacaccatatgaagcaacaagagcagagggaagaagtagcgccagcagcgccgatcagggacccagcactccgagatcaaagcattcagcaactgagcagagaaggaggaccaagataaatgacaggcttgaaatacttcgtgaactcctgccacacactgatcagaagagagacaaagcttctttcctttcggaggttattgaatacataaggtttttgcaagagaaagtccaaaagtatgaggaagccgatccagaaaggaatcacgaggattccaaatccatgccatgggcaaaagtctactatagatcatgctggagaaacacaaagaacaccagtcaagtccagggggaagatttgtcaccatccacacaggacatgaacaacgaacagtacggtcccaagcacatatcggcagcacaacctgctctcttcaacacacagagtgtaaccagtacaaccaccagttcctcccacatggcaacaggcacaccacaaaatttggaaaagaacagcacacccagcaatcagccaccatggctgagcatgtcaacaatgcgccaagagtctgaaccaggcaacaaaatgccgaacaagcatgagaaacagacccttcacgatgaaaaccatagtatttctagcgcttactctcaagggtctgttccttaa</cdnaseq>

Protein Sequence

<aaseq>MEIRRSLRPLDLAKQRGRSSGNGTAAGSAVDGASPAGSDSEEHV LPGGVGTFSIRHASGTPSREEAGSHGGVRRSAFAFAPALHGARMENAHETGGRSGSRA HRAPSTMWQDSAIDQRSIGQTPYEATRAEGRSSASSADQGPSTPRSKHSATEQRRRTK INDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYEEADPERNHEDSKSMP WAKVYYRSCWRNTKNTSQVQGEDLSPSTQDMNNEQYGPKHISAAQPALFNTQSVTSTT TSSSHMATGTPQNLEKNSTPSNQPPWLSMSTMRQESEPGNKMPNKHEKQTLHDENHSI SSAYSQGSVP</aaseq>

Gene Sequence

<dnaseqindica>1500..1660#1235..1412#1090..1128#916..1011#769..836#466..579#1..379#atggagatccgcagatcactgaggccactggacctggccaagcagcgcggccgcagcagcggcaatggcacggcggcggggagtgccgtcgacggcgcgtcgccggcaggttcggactcggaggagcacgtgctaccgggcggcgtcgggacgttcagcatcaggcacgcgtccggtactccgtcgagagaagaggccggtagccatggcggcgtcaggaggagtgcgttcgcatttgcacctgcgcttcatggcgccaggatggagaatgcacatgaaacaggaggaagatctgggagtagggctcaccgtgcgccgtcgacgatgtggcaagattctgccattgatcaaagatccataggccagacaccatatgaaggttagtaccgcagttgtattgttgattctctagtctgtcacttcaattcaggcactgatggatttgatatatacatgtgcactcagcaacaagagcagagggaagaagtagcgccagcagcgccgatcagggacccagcactccgagatcaaagcattcagcaactgagcagagaaggaggaccaagataaatgacaggcaagctagtagaggtcaaacaccattttgaattattttctgcagagcaggaacaaaccaaccatgaagacgtagctagatagctcaacaagatatcatattagcagcatttaattccaagacaatttcatataagtatatggtgcaagaaatgtgttctaaaatgcaattcttcatgctctccttcaggcttgaaatacttcgtgaactcctgccacacactgatcagaagagagacaaagcttctttcctttcggaggtaaacagaatatcaattttggcactgtagtcagcaggctatattgcaatttctcccttgtgaagcattttgtttgcaggttattgaatacataaggtttttgcaagagaaagtccaaaagtatgaggaagccgatccagaaaggaatcacgaggattccaaatccatgccatgggtactatcatagccatgttagcatgttcatgacataattgtgcaacagtattcaccctctatttttttttcttggtaggcaaaagtctactatagatcatgctggagaaacacaaaggtaattccgtaaaataaaaacagcaactgaaagcgaatgcacaattcatcataatcatataccaatgatatgtacccatccttgtttcttgttcatggtctcacagaacaccagtcaagtccagggggaagatttgtcaccatccacacaggacatgaacaacgaacagtacggtcccaagcacatatcggcagcacaacctgctctcttcaacacacagagtgtaaccagtacaaccaccagttcctcccacatggcaacaggcacaccacaaaatttggaaagtaagtccatttcttatcacctttcaacagtcagaattcttgtaattaagaactagatccactaactttaatgtcttttaaacgcagagaacagcacacccagcaatcagccaccatggctgagcatgtcaacaatgcgccaagagtctgaaccaggcaacaaaatgccgaacaagcatgagaaacagacccttcacgatgaaaaccatagtatttctagcgcttactctcaagggtctgttccttaaccatttgttacttcaagactaaagttagcacaatatgtaactaacaggatactacttcaatttgcaacagattattcaacagattgacagaagctcttaaaaagtcaggactagatccatctcaagctaatatagctgtagagatcaacctggccaaacgagcaagagataatactagtgacaactcaaaggtatagagctttacaaagttgatttattcatgatgtttgaacatatagatcgtctgcttaataattattttgtacctttgtcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0726700, RefSeq:Os02g0726700