Os02g0727100

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Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0727100| Description = Amino acid/polyamine transporter II family protein| Version = NM_001054529.1 GI:115448428 GeneID:4330594| Length = 3...")
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Gene Name

Os02g0727100

Description

Amino acid/polyamine transporter II family protein

Version

NM_001054529.1 GI:115448428 GeneID:4330594

Length

3871 bp

Definition

Oryza sativa Japonica Group Os02g0727100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31146440..31150310

Sequence Coding Region

31146823..31146940,31148579..31149044,31149116..31149319,31149433..31149588,31149704..31150106

Expression

GEO Profiles:Os02g0727100

Genome Context

<gbrowseImage1> name=NC_008395:31146440..31150310 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31146440..31150310 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatgccaatgccgacggagggcagcgagccacttctcccgaggaagcagagggacggcggtgacgacggcgccgcctcgtcgcacgaccacttcgacggcgcgtccttctccggcgcggtgttcaacctgtccaccaccatcgtcggcgccggcatcatggcgctcccggccaccatgaaggtgctcggcctcgtgccgggcctcatcctggtgatgctcgccgcggtgctcacggacgcctccatcgagctcctcgtccggttcagccgcgccgtgggcgccacctcgtacggcgaggccatgggcgacgccttcggtgctttcggcagggggctcctccagctctgcgtcgtcgtcaacaacgtcggcgtgatggtcgtctacatgatcatcatcggcgatgtgctctctgggaagtcatccagcggcggcgtgcaccatcacggcgtgatagaaggatggttcggtccaaaccggtggaacggccgcttctccatcctcgtcatcgtcacgctcggtgtgttcactccactgacatgcttcaagcgagtcgattcactgaaatacacgtcggccttatcggttgctctggccgtcgtgttcgtggtgatcactgccggaatcaccaccatcaagctgatgagagggcagattccgatgcctaaactgttccctgatgttcatgactggagctccacctggagacttttcactgcagctccagttcttgtgaccgcctacatttgccattacaacgtgcacccaattcacaacgagctcaaggaccactcccagatcaggccaatagtgcgggcgtcgctgctgctctgcttggccgtgtacaccaccaccagcttcttcggcttcctcctcttcggcgaggcaacgctggacgacgtgctcgcaaacttcgactccgacctcggcatcccctacagcttggtgctcgacgacgccgtcagggtcagctacgtgctccacctcatgctcgtcttccccattgtgttccacgcgctgcggttcaacatggacggcctcctcttcccctcggcgaggcccctctcttccgacaaccggaggttcggcgcgatcacggcggcgctcctcacggtcatcttcctcgccgccaacttcgtccccaacatttgggacgcgttccagttcactggcgccactgccgccgtcgccattgcctacattttccctgctggaatggcactgagggatcgccacggcatagcgacgaagggcgacaagtatctcgcggtgttcatgattgttcttgctttggtggcaaatggagtggccgtgtacagcgacgcttgcttggggacgttttag</cdnaseq>

Protein Sequence

<aaseq>MVMPMPTEGSEPLLPRKQRDGGDDGAASSHDHFDGASFSGAVFN LSTTIVGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVRFSRAVGATSYGEA MGDAFGAFGRGLLQLCVVVNNVGVMVVYMIIIGDVLSGKSSSGGVHHHGVIEGWFGPN RWNGRFSILVIVTLGVFTPLTCFKRVDSLKYTSALSVALAVVFVVITAGITTIKLMRG QIPMPKLFPDVHDWSSTWRLFTAAPVLVTAYICHYNVHPIHNELKDHSQIRPIVRASL LLCLAVYTTTSFFGFLLFGEATLDDVLANFDSDLGIPYSLVLDDAVRVSYVLHLMLVF PIVFHALRFNMDGLLFPSARPLSSDNRRFGAITAALLTVIFLAANFVPNIWDAFQFTG ATAAVAIAYIFPAGMALRDRHGIATKGDKYLAVFMIVLALVANGVAVYSDACLGTF</aaseq>

Gene Sequence

<dnaseqindica>3371..3488#1267..1732#992..1195#723..878#205..607#tccggtcgcgaggttaaaggggaagaactgaagaaggaagggaacccatcacctcatcaaatctgcctgtcttgattgtgcattttggactcttcgatccatgtctgcgtgaagaattttcagcttctactcagtaagagatcaaaacgcgatttaaaaaaactggaattccgtccgcgcaaatccacgcgtggatcagcgaggatggtgatgccaatgccgacggagggcagcgagccacttctcccgaggaagcagagggacggcggtgacgacggcgccgcctcgtcgcacgaccacttcgacggcgcgtccttctccggcgcggtgttcaacctgtccaccaccatcgtcggcgccggcatcatggcgctcccggccaccatgaaggtgctcggcctcgtgccgggcctcatcctggtgatgctcgccgcggtgctcacggacgcctccatcgagctcctcgtccggttcagccgcgccgtgggcgccacctcgtacggcgaggccatgggcgacgccttcggtgctttcggcagggggctcctccagctctgcgtcgtcgtcaacaacgtcggcgtgatggtcgtctacatgatcatcatcggtatggtttcatctcagcatgcattgcttagcttaatcaatcgatagtttaatttagactgttcggttgaagaaattttgtgaaatgatgggctctctactcatttttacgcaaggcgatgtgctctctgggaagtcatccagcggcggcgtgcaccatcacggcgtgatagaaggatggttcggtccaaaccggtggaacggccgcttctccatcctcgtcatcgtcacgctcggtgtgttcactccactgacatgcttcaagcgagtcggtgcgtacatggttgcccggctcaaccacacaaagctacagttttttttttcagtctgaacatttcgttctgactctaatggcttgtgttctttttccctgagatgagttcagattcactgaaatacacgtcggccttatcggttgctctggccgtcgtgttcgtggtgatcactgccggaatcaccaccatcaagctgatgagagggcagattccgatgcctaaactgttccctgatgttcatgactggagctccacctggagacttttcactgcagctccagttcttgtgaccgcctacatttgccattacaacggtacattttaattaccagctataagtttgcatttttatgtggaaatgtgattaacttggcactaaattcagtgcacccaattcacaacgagctcaaggaccactcccagatcaggccaatagtgcgggcgtcgctgctgctctgcttggccgtgtacaccaccaccagcttcttcggcttcctcctcttcggcgaggcaacgctggacgacgtgctcgcaaacttcgactccgacctcggcatcccctacagcttggtgctcgacgacgccgtcagggtcagctacgtgctccacctcatgctcgtcttccccattgtgttccacgcgctgcggttcaacatggacggcctcctcttcccctcggcgaggcccctctcttccgacaaccggaggttcggcgcgatcacggcggcgctcctcacggtcatcttcctcgccgccaacttcgtccccaacatttgggacgcgttccagttcactggcgccactgccgccgtcgccattgcctacattttccctgctggaatggcactgaggtgagtgatgaccaactgaacattatttttttctttacttagctcaatctcatactctcccaaaataaaaaataagtgcagccatggttttccgcgttcaattttaactgttcgtcttatttgaattttttttaaaaaaaattaaaaacataagtcacgagtaaattactgttcatgttttatcatctcataacaacaaaaatactaattataaaaaaatttcaaataaaacggacgatcaaaattagacgcggaaactcatggctgcacttattttggaacgagggtagtactagtctactagatggttaattttttttaggggcaattgtgtttctgcccttgctttacgattcaattgtgattttacccttgttttttaaggtttgtgattttgcccctgcttttttgaaatgaaggagccgcctgcccctactctgttaattagtggtaacggtgttaaatgtgtggtgaatagacaaacatacccctggacatgttttggtatacacactggatatgtttcaagttatttttgtgccaatttcatataaacgatgacagaacacagtttataaagtagtacatacttattacatatgattgcaacattgcacaagatcaaggtcctttatattgggtaagctacagaaacaagattgaatcacaagcatggcgtagcaaatcaagaaccccaacttcattatctagaaaagaaaaaaaaaaatcaagaaccccaacctgcgttcggttctgggtccgcggatgtggatgaactaaggtggcgggctccggcttggaggaggaggaggcctccaccgctgcctgtatggcgccgacggtgacatctctgagccacctgacgttgcctcggagggtggaagccgtggagctccggtcgacgaacgccggaagccacaggagaaggcccgcgcccgcggctccgtcggctggacgacgtgctccccggcggtgttgtcgatgagggagggagtcgcggtcgcgacgtcgtcaagcttcctttaacagcgccatcccgccgccaagcttcctgctcgctgcttgctggctcgctggccgacggagccgccgctcctctccgccgtgcgctggccgccgcgcctccctgcgcgtggcagccgcgtcgcgcatccctgcgcgctggccgcggggggcgccacgcctccctgccccgcgcgcccgccggtccgccgccgcgcctccctgcccgcgcccgactccaccgactccgccgcgcgctggcccgcggcagctgccccgcgctgccgccgccgccgccgcttgcaacccagctatagcgtttggagtggaaatcgggagttcgggacagggattggggatttgcctctttcattgaagggtagaatggtcattcacaaatgataataacattttgtttcatcatttaattctaaaatttcgggcccaccaaacttctgtcaaaaccaggggcagacgactgcttcatttcaaaaaagcaggggcaaaatcacaaaccctaaaaaacaagggtaaaatcacaattaaatcgtaaagcaagggcagaaacataattgccccttttttttatgtcacgctcattagatctctgtgaacttggttgctttgattttgcagggatcgccacggcatagcgacgaagggcgacaagtatctcgcggtgttcatgattgttcttgctttggtggcaaatggagtggccgtgtacagcgacgcttgcttggggacgttttagttggcgatcgcacatctccgtggtgatctgtgcattagttagtgcgatatgaaaaattcgttgtttgcacgttgaactcaaccattttgagttccatttataataagtacatatgtacaaattgcctgcaggttctgcagagataggtgtagataagaatgcagcggtgaaaaaaaaattctaaaccgtgaatttgtagaccttttcttgttactgacaaattggttgttctatacatgtccaaacggtactggacaagaactgatcagttcatgttgattttggtgataattaaagtcactgggattcgattggtgtagttggcatttcttttacgtaaggtagtctgcataatcagatattcagatggtgctttcctgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0727100, RefSeq:Os02g0727100