Os02g0729300

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Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0729300| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001054540.1 GI:115448450 GeneID:4330607| Length = 376...")
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Gene Name

Os02g0729300

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001054540.1 GI:115448450 GeneID:4330607

Length

3769 bp

Definition

Oryza sativa Japonica Group Os02g0729300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31239571..31243339

Sequence Coding Region

31241728..31243137

Expression

GEO Profiles:Os02g0729300

Genome Context

<gbrowseImage1> name=NC_008395:31239571..31243339 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31239571..31243339 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggttggcgtctctgccgccgtcgtggccagcactccagccggcgcatcccacgctgctccgccaccacaaaccagtaatcccctctcaacccctctctggaccacccctttccccacgaagctccaccccacgccggaacccccagttctggctggagtcgccgccgccgccgccatccagatctgctgtgcctttctccgccgacgatgtctcccacgtctcggagtccccggatccaaggagttcgcccacgcctgctatgccacgctccttcgctgatgctgtcaggttggatttcaatcccgccaaaggagacggcctgcccgttttcaaatccccacacggccaaccaccgccgcgcccaaaattgaagtccgccattactatcccagcctggagcacctttcagcgtcgcgcctacagggctactcccggagaggaaatgggcgtgcgtcgcatccatggtacggcgagaccaggccgcttcaatggcgagtggaaggaagtcaagccacgccactggtggcgccgctcgccgcattcacccgagtcccagcggccagcttccaggcgacaagacgcacattcaaggcgctcgttggctcccgctgcatcggcatcgctgcgcctcttcagagagagaacggctggaaaatgcttcaactgccttgcgcgtgatcaccgcgcagcgcgctgcagggacccggttcgttgcttcagatgtttccgttcggggcacaaggcaaactcctgctcccggcgtgaaccgcgaccacgccaacctcgccagtctccacagaaagcgctgcgccgccaagcttctacaccacccccgccacagaacacgtcgcaccgccaggcttctacgccatccccgtctcttccccgggctacacgaccacgccaaccacgccagtctccgcagaacacgtcgtgccgccaagcctccacaccacctctgcagctacctcttccacccaagccgtcctgcaacacgcggatggctctactgggagacccggcgacccggccggatgaagaccactgcttcgttccgacaccgttcgccacggaggctgagcggaaagaatgggaaagctcggcggtggtgtcctgggcgatgcgggcaccggcttccacaacggcgcaagatgttgaggcggcttttcgggaggaattccgtcttcggcgaggggaggtcacggtgacgcgccaccacccggaagccttcctgatcaagttcgagcatagcagtcactgctatgaagctatgcgcaagggcttcgtcaagcgaaacggtattgagctccacttcatcaagtggcgcagcctgagtgcggccctcggcatcgcgctcatgtttcgcgtgcgcctgtgtctagatggtatcccgcggcacgcctga</cdnaseq>

Protein Sequence

<aaseq>MRLASLPPSWPALQPAHPTLLRHHKPVIPSQPLSGPPLSPRSST PRRNPQFWLESPPPPPSRSAVPFSADDVSHVSESPDPRSSPTPAMPRSFADAVRLDFN PAKGDGLPVFKSPHGQPPPRPKLKSAITIPAWSTFQRRAYRATPGEEMGVRRIHGTAR PGRFNGEWKEVKPRHWWRRSPHSPESQRPASRRQDAHSRRSLAPAASASLRLFRERTA GKCFNCLARDHRAARCRDPVRCFRCFRSGHKANSCSRREPRPRQPRQSPQKALRRQAS TPPPPQNTSHRQASTPSPSLPRATRPRQPRQSPQNTSCRQASTPPLQLPLPPKPSCNT RMALLGDPATRPDEDHCFVPTPFATEAERKEWESSAVVSWAMRAPASTTAQDVEAAFR EEFRLRRGEVTVTRHHPEAFLIKFEHSSHCYEAMRKGFVKRNGIELHFIKWRSLSAAL GIALMFRVRLCLDGIPRHA</aaseq>

Gene Sequence

<dnaseqindica>203..1612#agttaatttcctgcaagaaggatgactgagtcaacaggcgaccgggcaggcgattcccaccgaccgacggccactccggccccggcggccacccccctgcgccggtagccaccccggcgccgacgcccaccacccacgcctctcttgccccatcgcgcttcccctggagcctgctcgaccgccgctcgacgttgctggccagatgcggttggcgtctctgccgccgtcgtggccagcactccagccggcgcatcccacgctgctccgccaccacaaaccagtaatcccctctcaacccctctctggaccacccctttccccacgaagctccaccccacgccggaacccccagttctggctggagtcgccgccgccgccgccatccagatctgctgtgcctttctccgccgacgatgtctcccacgtctcggagtccccggatccaaggagttcgcccacgcctgctatgccacgctccttcgctgatgctgtcaggttggatttcaatcccgccaaaggagacggcctgcccgttttcaaatccccacacggccaaccaccgccgcgcccaaaattgaagtccgccattactatcccagcctggagcacctttcagcgtcgcgcctacagggctactcccggagaggaaatgggcgtgcgtcgcatccatggtacggcgagaccaggccgcttcaatggcgagtggaaggaagtcaagccacgccactggtggcgccgctcgccgcattcacccgagtcccagcggccagcttccaggcgacaagacgcacattcaaggcgctcgttggctcccgctgcatcggcatcgctgcgcctcttcagagagagaacggctggaaaatgcttcaactgccttgcgcgtgatcaccgcgcagcgcgctgcagggacccggttcgttgcttcagatgtttccgttcggggcacaaggcaaactcctgctcccggcgtgaaccgcgaccacgccaacctcgccagtctccacagaaagcgctgcgccgccaagcttctacaccacccccgccacagaacacgtcgcaccgccaggcttctacgccatccccgtctcttccccgggctacacgaccacgccaaccacgccagtctccgcagaacacgtcgtgccgccaagcctccacaccacctctgcagctacctcttccacccaagccgtcctgcaacacgcggatggctctactgggagacccggcgacccggccggatgaagaccactgcttcgttccgacaccgttcgccacggaggctgagcggaaagaatgggaaagctcggcggtggtgtcctgggcgatgcgggcaccggcttccacaacggcgcaagatgttgaggcggcttttcgggaggaattccgtcttcggcgaggggaggtcacggtgacgcgccaccacccggaagccttcctgatcaagttcgagcatagcagtcactgctatgaagctatgcgcaagggcttcgtcaagcgaaacggtattgagctccacttcatcaagtggcgcagcctgagtgcggccctcggcatcgcgctcatgtttcgcgtgcgcctgtgtctagatggtatcccgcggcacgcctgatccgccgacatcgtcgagcggctcatcgcgcgcacctgtggcctcgaggagatcgagaccaacctgatccacccggtcgacactcgcacggtggatgtgtgggcttggaccggcaatccgagctccatcccgaagcggatgtggctaacctttaccggctcgacgcggggagccaaaccagagcaaatcctggtgtccgacagaccgccggcacactggcaacatggcgccaaattctgcgtctacatccacctggaggagatccacgactacacgacggtggcggtagacctcgatggcaacgaggcatgcgcgccctccaagcggcgccttccggagtggcacctcggcgtggccgacggggacccggtaccaacgcgagccttcgagaacttcccgcaccacccgcctccaccacgcactcgtcaaggccgcgagccagagcgcatcgacgaccgcgacgaccgtcgccgaagagccaaagatgatcgtgaccggagccgtcccaggcggtcgtataatgacgaccacccggaccacgacagggaccaagcctggcgacggcgcgacgacgacgacgaccgcgacggcaggggcggccggggccgcgaggcatggcgaggacgagaaagccgcaaagtctcgggccttgatggccaacgcgtgcgcgagcgttcgccgcgtcggcgcgactgggcagaggacgaccgtcgcggtgaccggcgtcatcacgtgcaggctgctgtcgccctgcctgctacaatcccgcctctcaagctcgctccgaagcaggtaactgattttaagatgttgttttcccttaactcccaccctcttcaggcaccaagggaaaacctccgtgagacgggggaaaggcttgtgaacagggtgaacaatttcgccgctgcggtggatgacgcttctcagcctggcggggaagaagcctggtccgaccgccggccaagtcgcgtccatgacgtcccgatccggcaggtgttcgaccggctcaagcactgcctcttccctgctggcatccactctacaccaagccactcgggccaagtgatgcctcatgacgagagggcgtcgatcggcgcggtggaagaagcacttgcagcactttagctcatggcggacgcgggtcatgccgtcggcgagcgaacgccgccatttccaacatcccccctccagtgtgctgggccatcaccagtatgggccggcctcctcccggaccttgggctgcagacaggagggagctgtcacgcaatgggcctgatgggccatgaagaccttcagcctgccctgccgatgtctactttcacaggcttgcaagcgggccatgatacggcccacccatcaccaccacagggccaacaggctcgaaccgacaccacggccaccatcagcgaggcaacactgcagccgccacggcggttgcgtcgaagacggtgacgccgccgcagctgattacagctgcgccaacgacggaacaagatgaacaccaagatgccgggaataagaacacgctgcaagtgctggagagcctcttctccaccccgccgcgcgccgttttgccacggccgacctcccctgcgctgacgacgacccaagcgaccccagcgccagcaccggcgccgccaggtggccacgggatggagcgtcgccgcagcgcaagactcgcggcaaagccgccaatgccaactatgcaacgctgcacgagggtgttattgaagcggcttggcatgctccatgacgacaagacgctcgacgaggtgctctccgactacatcgccatgttcaatggacctctaccgcaacacgtgatcgcagcgctcacgtccatcttcgacatcgacgccgatgcaatcatggaagccaatcacgtcgacaacacgctcctggaggttgtcggcgaaggcgtcgctgaccttgtcgaggaggttgccgacacagcggcatgaacgggagggtgggcgccctgctgagtactctgtcttctccccatgatttctaccccagatgaaagtttgtacccttttgcttgtgcaaagactcatagtttgcaccctgcggctgctgatggagcttttgctaatcgtcgcatgtatcctgcgtgggaagctgccctacatttggatgatttacgtttacggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0729300, RefSeq:Os02g0729300