Os02g0730100

From RiceWiki
Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0730100| Description = Pre-mRNA processing ribonucleoprotein, binding region domain containing protein| Version = NM_001054546.2 GI:29759987...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0730100

Description

Pre-mRNA processing ribonucleoprotein, binding region domain containing protein

Version

NM_001054546.2 GI:297599877 GeneID:4330613

Length

3905 bp

Definition

Oryza sativa Japonica Group Os02g0730100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31285412..31289316

Sequence Coding Region

31285412..31285564,31285879..31285954,31286423..31286525,31286637..31286707,31286814..31287157
,31288235..31288372,31288457..31288519,31288760..31288857,31288929..31289037
,31289314..31289316

Expression

GEO Profiles:Os02g0730100

Genome Context

<gbrowseImage1> name=NC_008395:31285412..31289316 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31285412..31289316 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggtgggtgctgatttcgctagtgtggtcaaggatggctgatttatggaaattatgtggagaaactgtagctattcctctacttcagacctacccagtaaccgtattatgttggtggcttttatgcccgtggggaatacttgtagattcatatatcatatttttttcagaggagggaggtttctgtggtgtagaatcttgcgcacaggccagtcttcctgattctttcttggccgacttagatgagttatcggacaatgaagcctatcccgaaggcgaagatgaagaggcaagaaatatggaagaagatggtgatggtggcatgccttgctgtgaatttcttaatcacgatgatcttaacagtgcctcagagcttcataagactcaacgttataacgacattatgcaacttctcggtgcaaagaagaaaaatctgtctggattttctactgcagcatcccagtttcgtgttggttatcttgaacaaactgaagtatttcaaagcacaattccatctttaagaactcatgcatgtagaattatatctgcaaaatcaacactagcagcaaggattgattccataagaggggatccaactggaaaagctgggcatagcttgttagaagaaatctgtaaaaagactgaaaagttgcaagaattaccacctgcgaagatcctaaagccacttcctgttccagattgtatgcccaaaaagaagagaggaggttgtcggctccggaaaatgaaagaaagatatgcacagactgacatgatgaagctggcaaatcggatgcagtttggtgtgccggaggagagctcattaggtgatggcttagggaaaggttatggcttgcttggacaagcaggaagtgggaaactacgtctcttagctggccaaagcagacttgctgctaaggttgccaaacgattcaaggcaaggagttgtgacaggagtgagtcaaggtcggggttaacatcaactctggcatttacaccagtccaaggaatggagctttcaaatccactggtgcacaatgaccattctgtcagtggaacccaaagcacttatttttcggatgttgggacattttcaagtatcagaggaaaagatgccatccccattcagtcatcagaaattcagaatccaggggtgtga</cdnaseq>

Protein Sequence

<aaseq>MWWVLISLVWSRMADLWKLCGETVAIPLLQTYPVTVLCWWLLCP WGILVDSYIIFFSEEGGFCGVESCAQASLPDSFLADLDELSDNEAYPEGEDEEARNME EDGDGGMPCCEFLNHDDLNSASELHKTQRYNDIMQLLGAKKKNLSGFSTAASQFRVGY LEQTEVFQSTIPSLRTHACRIISAKSTLAARIDSIRGDPTGKAGHSLLEEICKKTEKL QELPPAKILKPLPVPDCMPKKKRGGCRLRKMKERYAQTDMMKLANRMQFGVPEESSLG DGLGKGYGLLGQAGSGKLRLLAGQSRLAAKVAKRFKARSCDRSESRSGLTSTLAFTPV QGMELSNPLVHNDHSVSGTQSTYFSDVGTFSSIRGKDAIPIQSSEIQNPGV</aaseq>

Gene Sequence

<dnaseqindica>3753..3905#3363..3438#2792..2894#2610..2680#2160..2503#945..1082#798..860#460..557#280..388#1..3#atggtgagttccaagcacttccgtatctcgcatggtcgctgctatttcctcttctagtagatcatacccttcccccgatcgcggatgcccctttctaggttgcatctcgtactcttttttcgaggcgttaccgctgaatcgcgatttaagtcgaggaacttgagtcgtaattccgcttcgattacgtttaaattcgttggttggggtttaggactttaggctactgcagattccatgctgttgaattaatattaaccttggtggcaaaatttggttcagtggtgggtgctgatttcgctagtgtggtcaaggatggctgatttatggaaattatgtggagaaactgtagctattcctctacttcagacctacccagtaaccgtattatgttagcttattatggatagatgaatttaggagctataactcttaataattaatatccatttgaattgaaaggttggtggcttttatgcccgtggggaatacttgtagattcatatatcatatttttttcagaggagggaggtttctgtggtgtagaatcttgcgcacaggtatggatatcataatcttgtgtattccacagatccacacgattgatcagaatagtatcactgttggattgatagagcaatcatgttatgggatggttaaatgaatgtattttcatttgtccaattatcctggtggcaatcaatgttgatgcttccagagtcaactttctgttatgcatctcttctgtttttcatagtgtgtcaactaactaaaaggtgccaactaatgcaaattttcaggccagtcttcctgattctttcttggccgacttagatgagttatcggacaatgaagcctatcccgtgagttgatttctattacatgtaatgaattgtatgctatagtgatgttttaatggtgcacttaacttatgggtgctatttaaggaaggcgaagatgaagaggcaagaaatatggaagaagatggtgatggtggcatgccttgctgtgaatttcttaatcacgatgatcttaacagtgcctcagagcttcataagactcaacgttataacgacattatgcaagtaagtaactgaatgtgtacaacccattttttttttatctacaatctacaattgtaatattcaagctgcatgcctgcatgtgtgccttcttctttgctttcttcaaaaagaataatcatgctgtatatggcttaaggctgcctgagactaatgagtttgcccattgtttcccagtactgcataagtcaaacagtttaacataagaacttcatgtgctggatccttttaactgagcctgtcatactaaccgtactgctactattttccacactcccggttggttttcgtgctgaatagttctttaacaaagttttctgggtggatcttagagtgtaaagtaaacaaatatgcaatttgtttttcatgaaacaattgtgttgacttcttcaatttactgtactgaaaagtaatactattgtattttgtgagcagtaatgtgtctattctttcatctcttgtaatatcagttctcaaactctgaaggttatcgtgtcattcatttcgttaggccaatgtactgagaaactttcacatgtctactctcagaaaattgaagatgctcttcacagagggacaagcatattgccagaagatttggaacatcaacttattgctgattccaatgctttattagtagatatcgataatgagatcactatcatctacaatttcatacgggagaagtactagcaaaagcttcctctactagagtctcgcgttcaccacccaatcgattatgcccacattgtcaagaagattggaaatgagatggatttaacttgtgttgatttgaaagatattttgccatctgcagacataatgtggattatgatgaccgattcaatagctagcaaggagcctctttctgaagagaatttggtaaaaacaatcaaagcatgtgatagagctcttactcttgatgcagcaaagaggaaagttcttgattttttatagagtcgaatgggatgtatcgcaccaaacctttctgcaattgttgggagtgctgttgcttcaaaactgatgggagctgctggtggtttggaagcattggcaaaaatgccctcttgtaatttgcagcttctcggtgcaaagaagaaaaatctgtctggattttctactgcagcatcccagtttcgtgttggttatcttgaacaaactgaagtatttcaaagcacaattccatctttaagaactcatgcatgtagaattatatctgcaaaatcaacactagcagcaaggattgattccataagaggggatccaactggaaaagctgggcatagcttgttagaagaaatctgtaaaaagactgaaaagttgcaagaattaccacctgcgaagatcctaaagccacttcctgttccagattgtatgcccaaaaagaagagaggaggttgtcggctccggaaaatgaaagaaaggttagctatttcagactttatcaaaatgtgaaaacccatgaaaaaaactgtgtttagttatctgattatgttacttgtttgtcttgtctgggaacttgatttgcagatatgcacagactgacatgatgaagctggcaaatcggatgcagtttggtgtgccggaggagagctcattaggttagttacactatggatgaacaccagactggtgttttgtttagtttcagcatggctgaatctggcatctaatttttctttttgcctattctattcgttttctgttgttaggtgatggcttagggaaaggttatggcttgcttggacaagcaggaagtgggaaactacgtctcttagctggccaaagcagacttgctgctaaggttgccaaacggtgagcagttttgtttgtcattatttgttggcattttacttttaaaatgataaggcataggatgatatagagaactatgaacctggtttgctatgctagcgcaatgcaaaaactgcattatgtttgataggaaaaacagccagaaagaaacattccgttgtcccttctttccactttgctatgtaaatattttcttttcataggatacatgatggatatttctccccttcttttcacttaccgcacttctatatatgtttctctaaaattaccaggcagttcaaaccttgttctcatgaatcatatgatgagttcagtcactctttacattctgtagtgaacacaaccgttctttattctgcatcatacttgctttcattgtttgcaacgcgttaaaaatgttttgttcctttcacatgatcctcttttaccttattacttttgttttatatttattcttgataccagattcaaggcaaggagttgtgacaggagtgagtcaaggtcggggttaacatcaactctggcatttacaccagtccaagtaagttcttgctttgaactggagccatcttgtcgtttgccttattgaaagttggttcgctacataacctcaaactctttatggggtttatgttacatgtcttgttttgtatgctcttcacttgtctaggcacacactagtcactactcactactccatccgtcccataaaaaactaacttctagctacgaatctggaagtagcgtttgtccagattcagttagtaaatcaccttggcctccctttatgttgtttagatagcataaaaaatccttttgcttttcatgtctgactattgctatcatttccttcagggaatggagctttcaaatccactggtgcacaatgaccattctgtcagtggaacccaaagcacttatttttcggatgttgggacattttcaagtatcagaggaaaagatgccatccccattcagtcatcagaaattcagaatccaggggtgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0730100, RefSeq:Os02g0730100