Os10g0442300

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0442300| Description = The start codon is not identified.| Version = NM_001071231.2 GI:297610555 GeneID:4348729| Length = 9176 bp| Definit...")
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Gene Name

Os10g0442300

Description

The start codon is not identified.

Version

NM_001071231.2 GI:297610555 GeneID:4348729

Length

9176 bp

Definition

Oryza sativa Japonica Group Os10g0442300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16350959..16360134

Sequence Coding Region

16351275..16352234

Expression

GEO Profiles:Os10g0442300

Genome Context

<gbrowseImage1> name=NC_008403:16350959..16360134 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16350959..16360134 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttgttggggggaatgtgtggtggtgggtgcatgcagagccgaggaaggacacgatcacgtacgtgccgggggtggaggcgatcgagccgggggagctgatgtcgtacctgcaggacacggacacgaccacggtggtgcaccgcatcatcttcagggcgttcgaggaggcccgcggcgccgactacgtggtgtgcaacacggtggaggagctggagccgtccaccatcgccgcgctccgccgcgagcggccgttctacgccgtcggccccatcctccccgccggcttcgcccgcagcgccgtcgccacctccatgtgggccgagtccgactgctcccggtggctcgccgcgcagccgccgcgctccgtgctctacgtctccttcggcagctacgcccacgtcacgcgccgcgagctccacgagatcgcccgcggcgtgctcgccagcggcgcccggttcctgtgggtgatgcggccggacatcgtcagctccgacgaccccgacccgctccccgacggcttcgccgccgccgccgccgccgacggccgcggcgtggtggtgccgtggtgctgccaggtggaggtgctcgcccaccccgccgtcgccgccttcctcacgcactgcggctggaactccatcctggagagcgcgtgggccggggtgccgatgctgtgcttcccgctgctcaccgaccagttcaccaaccgccgcctcgtcgtgcgggagtggcgcgccggcgtggccgtcggcgaccgcggcgccgtggacgccggcgaggtgagggcgaggatcgagggggtgatgcacggggaggaaggggaggtgctccgggagcaggtgggcaagatgcgggccacgctgcacgccgccgtcgcgcccggcggctcgtcgcgccgcggcttcgacgagctcgtcgacgagctgaagcgccgctgcggcggcggcggcggccgccattga</cdnaseq>

Protein Sequence

<aaseq>FVGGNVWWWVHAEPRKDTITYVPGVEAIEPGELMSYLQDTDTTT VVHRIIFRAFEEARGADYVVCNTVEELEPSTIAALRRERPFYAVGPILPAGFARSAVA TSMWAESDCSRWLAAQPPRSVLYVSFGSYAHVTRRELHEIARGVLASGARFLWVMRPD IVSSDDPDPLPDGFAAAAAADGRGVVVPWCCQVEVLAHPAVAAFLTHCGWNSILESAW AGVPMLCFPLLTDQFTNRRLVVREWRAGVAVGDRGAVDAGEVRARIEGVMHGEEGEVL REQVGKMRATLHAAVAPGGSSRRGFDELVDELKRRCGGGGGRH</aaseq>

Gene Sequence

<dnaseqindica>7901..8860#gtacgccacgctactagctctctctgctcgcagcatctcacacgcacgacacgcacgtacaccgtgtgcgttctcgagttctcccgcgcacagcgcagagagatcgatatggggcagcagcagccgcaggacgccgtggcagcgaacggcaacggcggcggcaagcggccgcacgcggtggtgatcccgtacccgctgcagggccacgtgatcccggcggtgcacctggcgctccggctggcggcgcgggggttcgccgtcaccttcgtcaacaccgagtccgtgcaccgccagatcacctcgagcggtggcggccatggcgtcggcggcggcgacgacatcttcgccggcgcgggcggcggcgcgatgatcaggtacgagctggtgagcgacgggttcccgctggggttcgaccggtcgcggaaccacgaccagtacatggagggcgtcctccacgtgctccccgcgcacgtcgacgagctgctgcgccgcgtcgtcggcgacggggacgccgccgccgccacgtgcctcgtcgccgacaccttcttcgtgtggccggcgacgctcgccaggaagctcggcgtgccgtacgtctcgttctggacggagccggcgatcatcttcagcctctactaccacatggacctgctcaccaagaacggccacttcaactgcaaaggtataaaaccaaataagttactccctccgcttctaaatattcgacgccgtttgattttttttaaacatgtttaaccattcgtcttacttaaaatttttttgaaaaatttgtaaaactatatatatatataaataaaagtatatttaacaataaatcaaatgatagaaaaagaattaataattacttaattttttttaataaaatgaataatcaaatatatttaaaaaagtcaacggtatcaaatatttagagatttttactctcacgcaacaatcttcacagtatatactaccgctgttctaaaataagtacaattgaaacactaacaaaaaaaaagtaccaaaaaatagaaagaaaagaaaaacaaaagagcttcgacgagacgacgactcaagcttgaaagcttgagctagaacagacatcacaaactgagaagttagaatggaaactgagaatagtcaaggacagctgacgggttatctacttaattataaaacaaataaatattatatgttgtaagcctaataaatactccatctatttataaccatttcaagttataaaatattttgactttagttaaagtcaaactgctttaagtttaattaagtttgtagaaaaaaatagcaacatttttaacccaagataaatttattatgaaaatataattcaaatattgatttgatgaaactaatttagtattataaatattactatatttttctataatcttagtcaaacctaaaacaatttgaccaaaatcaaaacgttttataacctgaaacggtgggagtaacttggacaagtatacggttgaagaaagtttttaaataacacattttaaaagtatggaacaagtaagatgtgaaaacaatttgatagataaactgaaaataacggagccaattaagttggctatggctttgtttgttagtattagttgggatccttttccttctgcatgaaaaataaggtactagctaattagctcatgattagtttgtattagcctaattgtttcgcttatttgtggaataagccaaacatcatatttgcaaacgaaaaataatttataaataaaacttttgtataagtgttctttgcgatctaaacgtaaaggctgaaaaataaactttaataaaaaacccgaaaatcagctctaaatttaaggttaaaaattcaaattttgtttcataaatataagcataagtgaaaagatgaggtctaacttaaaaaatagattttttttttcaaaatacaacgttccgaacgtttaactcaaactgaaggcagaagctagacagaaactgtgtagaaccacaaaagtcacttggttttcgaggctcgatctagaacgggaagtctcgaagcagagaagataaatcaaagcctgacgaaagcgtcaccccaatcaggcggagacaggcccatgtcacgccatgccaagccaatgccatttgccatcactgactcactgtagctagtcgtcgtccatatcgctctcgatcgcccacccgcccagccctgcaggatcggtgcgtgcgcacagctccagctctcgccgcgctctcgcgtccgttggacacacggccacgaggggcacgctccaccagaaattcggaacgagccaatggagggctcgcggcaggcggcgatggagaagcatattgtgtgttggcaaagtgcaggataggaacccatccctcttgcacttaaaatagagcgatcttttaacacatgattaattaagtattagctatttttttaaaaaaaattgattagtttaattttttaagcaacttttgtatagaaatttttttaaaaaacacaccgtttaatagtttaaaaaacgtgcgcacgaaaaacgagggagaggggtagcaaacagccatgtcggctcgtgtgtacttccttgtactgtatctctgaacggaatctatcgcggagagatgcggccacgcaggagacgacgtcgtcagtggtgtggtagagccaagggcagaagtggtatacacggtgggtggttactgtaaaacgctgtttaattttcagtccctactaaaacagagaagttcaatcgaacccacacactcgtcaacaagctttgattagacgtacgggtcaccggggtgatcacccggtcggggatgggttcaccggcaaggcatggtggctgcagggtgagctggggcggcgaacgaggcggccaagggaggaacacgacgagccaggaggtactggtaattatttgtctttcgagagtctggttataaaattacatgtcgatgattgggaccggtggaaaaacaaataatatggggttattttataaataatgaagtgaaaacatcccggcctaccatgtttaattcataaatattatagcacgtaatcataaccaaggatgagagatgcctttgtatcgaaaccatatttccatataactgtttttcccattttcatagatctatttcttcgtgtctttctctcttagccgctccgtcctcctcctccctcccttccccgattcttccacacgcatcaatcctcgatgctgatagtatcccccgtattctttccctcaccggcgatagtatggaagttgatgaggtcatggggtcatcggagtccgaaaagtcagcaagaagggatgcggttacagtggcaaggttgatgttatcgtagttgagaaggaagaagagggaggatgcggggctgagatgaggtctgggccgtgcatcggcgataaggcacaggttgttgttctcagcatgaggggtgctcacaaagtgattcatgcgggcttgaggttattatcgcatcgtgctccttgccggctcatcacgttgctcatttgcactgtgtgtatgtacgccatcctcggctgataccgtaggtaccatgtatatgccaagtatcacgacttgaggaaggaatgcacgtcgtcgtcgcctaggctgtgagccacctaccgttggctcctgctctcctctatgtgctccctccttccctactgttgatgtggctggcgaggcaaggagctagggagtacaaaagttcactcatgcgtggaagctcggtcggataggtaagaaaagaaagggggtcactaaagtattcggtcccctagtcatcctcattttaattaggttgttaaatacaatattaccctataaagtacttgcatataagatataattagagttttataaaaaaaaacaacataattttaatttctacaaagcggtaaaaaccaatacagcgcagatgctcatgttaaaaatttgtctttttgtgttagcgttcactcgtacgagccagtatcgaaacaagtgggatacaactagaagtaggtggaaccaaatcacaagccacataaaaccactctccgtagaaactttgcaaaacataacattggaaaaagaaaagccgaaatgattcactgtacatgcaaaaacaaaagtagaatcattgtcacgttcaaatcattctattttccatggggtggcagacatggaccgagggcccaaactagaatcattttattttaccgagcacataataacgtcaagaagtgacctaccggtcgttcaaatcattgtcacgttgcctcactccgctggacttttcttctgcatgaatataaacaaacgtctgtaggctgccgcagaaaaaataatagtactcttctctcctcttctcgtttaaagagagttccatggattgccctataataagccaaagtaaaagtcaaaaattaaattttcaaataattttagcatagtttcttttaagtattggctttttaatcgttaagaacacatatatatacatatatataaaatttttacatataaattagtttttattttttaataaactaaaatgacttattagaaaatgtgatgtgagcaaccgatcataccgaaagacttcagtgcctgacgagcgagaggctgattaatcaacggagaaacgaaaaagaatggtgactagcgttggcagtagctgccgcttgggctagactgctccagaacataccgaataactgtttagcctctcaggtctttagagttgtcacgagaagtcgtagcttacacttccattttatattataataagtcgtttgaatattttcaatcgaaattatttagatttaatcaagtttataaaagaataacaacatctaccaaaccaaattagtttcattaaatttaatattgaatatattttaataatatgtttgtattatattgaaaatgatagtatatttttattggtcaaacctaaagaagttttactagaaaaaaatcaaatgtcttataatattaaacggatggagtatgtatgtatatatgtacatgtttatcctttaggctttgtgtggaacatggaaagttcctttttatttttccgcttatacgagagatgcatgcccacacaggactagctactatactgtcccacgattgcaccattaaaaccctcacttagtctgtattcggtatgtggtattgggaactaatcccacccgcacgtaaaatagagcaactcattagcacataattaattaagtatcagttatttttaaatggattaaaatgatttttaaagaaactttcgtatagaaaacttttgtaaaaatatatcgtttagcagtttaaaaagcgtgagcacggaaaaacagggagacgagttgagaaagaaggggaagaagacaaccttagagcatgcatctccaatgtgaagataaaaccaattttaaagcggagaaaccaaatgatgcattttgcggtagttgatgcgtgattgttagataggaaaaaaaaggaacttcaaagtgaaatctaacttaggcgagtaaagaagtaaaaaaaatggtttgttgcattgtacataattggcatatgcatgaagctaggacggacacgattagcggattctttttacgtggaatccataaattgtttttcacgttggagcgatcgaaccgaattttgtatgacttgattgacttctgcctattgcactggtcgaaccaacgctggaggtgcggaggtgcccttaatagtttactactccacacgtgtatgttattatgtgtttcttagatgtttttaattactcgatgcattagaaaattgcaaaaatccggtaaaattcccatgatagtgggcttaattaagctcctagccaaaactacttactcaatccgtctcgaaataattgtaattctagattgtttagcatatattaaagtttgagaaaaaaaactataataccctttatgaaatgatgtataggtaaaagtgtgagggtagttgagggtaaaataaggagaattttgaatgagaagtgattaatgagatcattagtactttatcgtggcaactattttgggataaatttaaatcctaaaaatacaattattatgggatagaggtataatttatagttctgtgaaaaccaaactctctttctctcatattcaccaagattatccaatatccatcactgtcaatggcaagaacaacctaattaacaaacagattagctgccggccggcggctaaagcgaaaatatataacaaaacctattagggtaaattaaggttctcaatcgccgcctttgacacgatcacgaggtcatcagttggtgtgtccacatatagtgatgtcagatgtcactcgctggatcatataaattccgagagtggattaaattctcgaggggatatctccttgttatttacatatcatttaaatgagttatagaaaatttaaaaaataaatacatagattaatatgtgatagatcataaacatacaggttaaaattcaacttctacatgtttcaataaaaaaacaaattaacatatattcacaagcagatttatttttcattgtaacttatagaagttaaatttgatcttacatgtgtagtgatttatcacatattaatatatcttatttatttttttttagttttttcataaccatttagatgatataggagatgtctcctcgtatgtttagaatagttctgtataaattcttttttaacgaatagttccctataaattccactagcttggtagcggagtgaaccagtgatagagcagacgaaagaatcataggattggttggttgattagctgctagcgctactagcttggcgatcggcaatgggggaagaggttgctgccaccgccgccgccgccgccggcggcaagccgcacgcggtggtggtgacgtacccgctgcagggccacgtgaacccggcggtgcacctggcgctgcagctggcggcgcgggggttcgccgtcacgttcgtcagcacggagtccgtccacgagcagacggcgcgcgcgctcggcgtcgccgatccgtccggctacgacgtcttcgccgcggcgcgcgccgccgccgcgaaagggggcggcggcggcgagacggtggcggccgccatggacgtgcggtacgaggtggtgagcgacggcctccccgtggggttcgaccggtcgctgaaccacgacgacttcatggggtcgctgctccacgcgttcggcgcgcacgtcgaggcgctgctccgccgcgtcgtcgtcgacgcggcggcgacgttcctcgtcgctgacaccttcttcgtctggccggcgacgctctccaagaagctcgggatcccctacgtctccttctggaccgagccggcgctcatcttcaacctctactaccacatcaacctcctcaccgagcacggtcacttccgttgcaacggtacacgaacacgagcacttggcacttacacaagccatcttaggtcttgccaaaagagcttacgatatagttgcagtttcgtgcagaatctctagctttctcaaatagtttagattttaattcaaattctcagaattcataattttaaaatcttaaaattaaactataaatcagaagtaaaaaaattcaatattattaattcttgaaagttcaaaaaatattaattctcagagtctgactaccaaacagttgtgattctcatcattttaatcttctcagtcacatttctcattttcgtgaattggtcggtgcatgtaattcaactgtttcacatttttcgtgatgcgaaacgaagatccttgcaagtacttccttcgttttaggttataagactttcttatgacttgaaacggaggtagcaagtaattttattttacgagttgttttaatttgttggggggaatgtgtggtggtgggtgcatgcagagccgaggaaggacacgatcacgtacgtgccgggggtggaggcgatcgagccgggggagctgatgtcgtacctgcaggacacggacacgaccacggtggtgcaccgcatcatcttcagggcgttcgaggaggcccgcggcgccgactacgtggtgtgcaacacggtggaggagctggagccgtccaccatcgccgcgctccgccgcgagcggccgttctacgccgtcggccccatcctccccgccggcttcgcccgcagcgccgtcgccacctccatgtgggccgagtccgactgctcccggtggctcgccgcgcagccgccgcgctccgtgctctacgtctccttcggcagctacgcccacgtcacgcgccgcgagctccacgagatcgcccgcggcgtgctcgccagcggcgcccggttcctgtgggtgatgcggccggacatcgtcagctccgacgaccccgacccgctccccgacggcttcgccgccgccgccgccgccgacggccgcggcgtggtggtgccgtggtgctgccaggtggaggtgctcgcccaccccgccgtcgccgccttcctcacgcactgcggctggaactccatcctggagagcgcgtgggccggggtgccgatgctgtgcttcccgctgctcaccgaccagttcaccaaccgccgcctcgtcgtgcgggagtggcgcgccggcgtggccgtcggcgaccgcggcgccgtggacgccggcgaggtgagggcgaggatcgagggggtgatgcacggggaggaaggggaggtgctccgggagcaggtgggcaagatgcgggccacgctgcacgccgccgtcgcgcccggcggctcgtcgcgccgcggcttcgacgagctcgtcgacgagctgaagcgccgctgcggcggcggcggcggccgccattgacccggcgggtcaaagcacatgtacacgtcatcgatacaccgccatgccacgcgtctcgtaacgtgtcgggctcgtatgaactagtagtatcatcgttctcgtacgtgcacacacgtacaagtcctagattgtagccactgtgccagtgacgtgcagcagatgtgtctatgtagaagctactgtaatttggggatttgctgggcagaaccacccaaatgtttgcgagaacggattgtgtttccgttcaaactaagtttgtttgaagcgatgtgtttgtgtgttcaaataaaaacacatttgaattttgtttggttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0442300, RefSeq:Os10g0442300