Os02g0730700

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Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0730700| Description = Peptidase A1, pepsin family protein| Version = NM_001054550.1 GI:115448470 GeneID:4330617| Length = 3503 bp| Defini...")
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Gene Name

Os02g0730700

Description

Peptidase A1, pepsin family protein

Version

NM_001054550.1 GI:115448470 GeneID:4330617

Length

3503 bp

Definition

Oryza sativa Japonica Group Os02g0730700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31324819..31328321

Sequence Coding Region

31325082..31325197,31325319..31325391,31325504..31325618,31325736..31325818,31325900..31326053
,31326227..31326463,31326580..31326803,31327025..31327142,31327654..31328255

Expression

GEO Profiles:Os02g0730700

Genome Context

<gbrowseImage1> name=NC_008395:31324819..31328321 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31324819..31328321 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgccgcctcccccaccgcccccggcggcgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagccctccaagggcaagaccatcaccgcgttcacctacaccgacgacgacgtcaccccgcccccgcctacgcctccgccgacgcatctgccgacgcgggctctagtgcccgcgggggcgggggcgggggcggaggctaggcgatcgaggcgggggttctcgccgcggcgggcggcggcgatggtgctcgttctcggggcgctcgccgtcgcggcatactactccttctactcggacgtggccgtccagttcttggggatgcaggaggaggcgcagaatgagaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgcgctgcgggagtttggagacatcaagctcgcggccagaagattcgataatgacggcggagggggcgtcggcaggaaatctaggaacaaattggaggtcaagaaggcagctgcggcggggacgaactcgacggctctgctcccgatcaaggggaatgtcttccctgatgggcagtactacacatctatttttgtgggcaatccacccagaccttattttcttgatgttgatactggaagcgatttgacatggatccagtgtgatgcaccatgcacaaactgtgccaaaggacctcatcctttatataagccggcaaaagaaaagatagtccctcccaaggatttattatgtcaagagttgcaaggcaaccagaactactgtgaaacatgcaagcaatgtgattatgagattgaatatgctgatcgaagctcctccatgggtgtccttgctagggatgatatgcatattatcactactaatggtggaagggaaaaactagattttgtgtttgggtgtgcatatgatcagcaaggccagcttttggcctcaccagctaagaccgatgggatccttggtcttagtagtgcaggaataagccttcccagtcagctggccaaccaaggcattatttccaatgtttttggtcattgtatcactagagatccaaatggtggaggatatatgtttctaggggatgactatgtacccagatggggaatgacatcaacacctatccgaagtgctccagataacttgttccacacagaagcccaaaaggtatattatggggaccaacagctcagtatgcgtggggcatcagggaactcagttcaagtgatttttgacagcggaagttcatatacatacctcccagatgaaatatacaaaaaccttattgcagctatcaaatatgcctacccaaattttgtccaagatagttcagatcgtacattacctttatgcttggcaactgattttcctgtgaggtatttggaagatgtcaaacagctcttcaagcccttgaatcttcattttgggaaaagatggtttgtaatgcccagaacattcaccattcttcctgataattacttgatcattagtgataaaggcaatgtctgcctgggattcctcaatggaaaggacatcgatcatgggtcaacagtaatagtcggagataatgctctgcgcggcaagttggttgtgtatgacaatcaacagaggcagattggatggactaattcagactgcaccaagccacaaacacaaaagggctttcccttcttcctctaa</cdnaseq>

Protein Sequence

<aaseq>MPPPPPPPPPPAAPDPPQLHGVVIITLPPPDQPSKGKTITAFTY TDDDVTPPPPTPPPTHLPTRALVPAGAGAGAEARRSRRGFSPRRAAAMVLVLGALAVA AYYSFYSDVAVQFLGMQEEAQNERNETKSFLLPLYPKARQGRALREFGDIKLAARRFD NDGGGGVGRKSRNKLEVKKAAAAGTNSTALLPIKGNVFPDGQYYTSIFVGNPPRPYFL DVDTGSDLTWIQCDAPCTNCAKGPHPLYKPAKEKIVPPKDLLCQELQGNQNYCETCKQ CDYEIEYADRSSSMGVLARDDMHIITTNGGREKLDFVFGCAYDQQGQLLASPAKTDGI LGLSSAGISLPSQLANQGIISNVFGHCITRDPNGGGYMFLGDDYVPRWGMTSTPIRSA PDNLFHTEAQKVYYGDQQLSMRGASGNSVQVIFDSGSSYTYLPDEIYKNLIAAIKYAY PNFVQDSSDRTLPLCLATDFPVRYLEDVKQLFKPLNLHFGKRWFVMPRTFTILPDNYL IISDKGNVCLGFLNGKDIDHGSTVIVGDNALRGKLVVYDNQQRQIGWTNSDCTKPQTQ KGFPFFL</aaseq>

Gene Sequence

<dnaseqindica>3125..3240#2931..3003#2704..2818#2504..2586#2269..2422#1859..2095#1519..1742#1180..1297#67..668#cgccacttgcctcccatggctccccctctctgacctcgccggagcgccgccgggatctcgacggtgatgccgccgccgccgcctcccccaccgcccccggcggcgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagccctccaagggcaagaccatcaccgcgttcacctacaccgacgacgacgtcaccccgcccccgcctacgcctccgccgacgcatctgccgacgcgggctctagtgcccgcgggggcgggggcgggggcggaggctaggcgatcgaggcgggggttctcgccgcggcgggcggcggcgatggtgctcgttctcggggcgctcgccgtcgcggcatactactccttctactcggacgtggccgtccagttcttggggatgcaggaggaggcgcagaatgagaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgcgctgcgggagtttggagacatcaagctcgcggccagaagattcgataatgacggcggagggggcgtcggcaggaaatctaggaacaaattggaggtcaagaaggcagctgcggcggggacgaactcgacggctctgctcccgatcaaggggaatgtcttccctgatgggtgcgtataattgttcaggaatcggattttgatttgagcgtcactcttgcagctttatcttatgattcaagagaaatttatttctcatcttagtttggttagagagtggggatttaatcatgttgatgatcaaatgcagcccgagagtatcttagtttggttagagagaggggatttaatcatgttgatgatcaaatgcagcccgagagtgtttcgttgatctgggttggggatattcaccaagtgatctcttataggagtacttctcttgaattatacggcaaaatccgttatgatgtcttagtttatagttgtacttgttatacatggactgttatttttgtgaatttaacaattttagttaaggttagaccctttaccaaactgatctctatagttgttattctggccttagtcttcggtatatgatgcaagggatgttatacttgaactatttgggttaatgtcatcttacacctgctaatatcattgtaccccaaatgcaatgcaggcagtactacacatctatttttgtgggcaatccacccagaccttattttcttgatgttgatactggaagcgatttgacatggatccagtgtgatgcaccatgcacaaactgtgccaaagtatgcaactaaacatgagcaatttccattctagttccaacttccaacaacatccttaacaaattgttctagactatgctaggatctctacttgtctactataaatatgttgttagtaaaacaaaactaatacaacaatatttctgtcattttgtgattagcctcatattcttttcaatgctgttgtttttttatctgatgaacatgtgttgtactcgcagggacctcatcctttatataagccggcaaaagaaaagatagtccctcccaaggatttattatgtcaagagttgcaaggcaaccagaactactgtgaaacatgcaagcaatgtgattatgagattgaatatgctgatcgaagctcctccatgggtgtccttgctagggatgatatgcatattatcactactaatggtggaagggaaaaactagattttgtgtttgggtatgttcaaaccttttaagagaggatatgtagccgacagactatatgttatgacaaatggtgtcaaatcatataaatatctgacattctgactgcttgatgtcctacaaatgtaggtgtgcatatgatcagcaaggccagcttttggcctcaccagctaagaccgatgggatccttggtcttagtagtgcaggaataagccttcccagtcagctggccaaccaaggcattatttccaatgtttttggtcattgtatcactagagatccaaatggtggaggatatatgtttctaggggatgactatgtacccagatggggaatgacatcaacacctatccgaagtgctccagagtaagtcctgttctttggaagtttaattgcatgttttccctggccagtggccacttttttcctgttctccgtattcttaagcaaaagtttctgtatgcacattgcaatgatcctgaaaaaaagaatctggtaaattcttttcactctccctaatgatctttttatactatcagtaacttgttccacacagaagcccaaaaggtatattatggggaccaacagctcagtatgcgtggggcatcagggaactcagttcaagtgatttttgacagcggaagttcatatacatacctcccagatgaaatatacaaaaaccttattgcagctgtgagtatttttcttaattgtttaaaagggttcaactattcaaccacattttgacttaccttttctccttgaccttggcagatcaaatatgcctacccaaattttgtccaagatagttcagatcgtacattacctttatgcttggcaactgattttcctgtgaggtaaaacaatggagtaatcatagcgctccaatagattgcctttgctgatgaagttcaacacgcaactctccagaaaaaggaactattcatttttccttgtgatcttatgatatccaggtatttggaagatgtcaaacagctcttcaagcccttgaatcttcattttgggaaaagatggtttgtaatgcccagaacattcaccattcttcctgataattacttgatcattagtgtaagttttgatgctttcctcatactgttagaacttttatcatctatcggcccctctaacttgagttctgtgctaaaattactccatctgtttttctttctggatttcccaggataaaggcaatgtctgcctgggattcctcaatggaaaggacatcgatcatgggtcaacagtaatagtcggaggtatagatgagcttcatcttagcacttgcaaaattttacctcgattcgcaattctagatgcatcgtgagatggtcggttttgtcaaacattggaataatccttccctgattttccatatagataatgctctgcgcggcaagttggttgtgtatgacaatcaacagaggcagattggatggactaattcagactgcaccaagccacaaacacaaaagggctttcccttcttcctctaacaagtattgtgcaataaacatatgtaaatgatacatagagactaccaatagagctgcttacgaatagcatatcctgttatgtgccgccctatctcctctacagtccatagtataaatcctggttgtttgttgtatacttgggtactttttgtaatatagggtgttgtatacccaagaagcagtgtatgtatattcggattaatggagtttcagatataataatcattatcgttattaagactataataaagtctagattgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0730700, RefSeq:Os02g0730700