Os02g0731900

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Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0731900| Description = Very-long-chain 3-ketoacyl-CoA synthase family protein| Version = NM_001054558.2 GI:297599884 GeneID:4330627| Length...")
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Gene Name

Os02g0731900

Description

Very-long-chain 3-ketoacyl-CoA synthase family protein

Version

NM_001054558.2 GI:297599884 GeneID:4330627

Length

2051 bp

Definition

Oryza sativa Japonica Group Os02g0731900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31387097..31389147

Sequence Coding Region

31387201..31388658

Expression

GEO Profiles:Os02g0731900

Genome Context

<gbrowseImage1> name=NC_008395:31387097..31389147 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31387097..31389147 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgagctcgtcggggcagctcaagaggctgaagccgctgtaccagctggcggtgaacaacatcctcgccgtcgtcgccgtgccgctcgcggcggcggtggtgttgaaggcggcggagctcgggcacgaggagatcctcgccagggcgcgcgcgctcccgccggcgcacctgttcttggccgcgttcgtcccggccgcggcggcggttgtctacctcatgctccgcccccgcgcggtgtacatggtggactacgcgtgcttccgcaccagccccaactgccgcgtcccgttcgcgacgttcctggagcactcccgcgtgtggccgggcttcgaagagcggagcgtccggttcatgacgcgcctgctcgagcgatcgggcctcggcgaggagacctgcctgccctacgcgcagcactacatcccgccgtcgcgcgacctcgagtcatcccgcgccgaggccgagctcatcatcttctccgccatcgacgacctgctcgccaagaccggcatctccccccaggacatcgacatcctcgtcgtcaactgcagcctcttcgccccgacgccgtccttcaccgacatgatcatcaaccggtacaagctccgcaaggacgtgcgcaacgtgcacctctccgggatgggctgcagcgcggggctcatctcggtgggtctcgccaggaacctgctccaggtcgcgcccaagggcgcgcacgcgctggtggtgtccacggagaccatcacgccaaactactacatgggccaggagcgtgccatgctgctgcccaactgcctgttccgcatgggcggcgccgccgtgctcctctccaccaacggtgccaaggcgcggttccggctggcgcgcgtggtgcggactctgaccggcgcccaggacggtgcgtaccactgcgtgtaccaggaggaggacggccgcggcaacgttgggatcaacctctccaaggacctgatgagcatcgccggcgacgcgctcaaggccaacatcacgaccatgggcccgctggtgctcccggcgtcggagcagctcctcttcgcgctctccttcatggcgcgcaaggtgctgagcgggcggatcaagccctacatccccgacttccgcacggcgttcgagcacttctgcatccacgccggcggccgcgccgtgatcgacgagctgcagcgcagcctcaccctgtcggacgagcaggtggaggcgtcccgcatgacgctccaccggttcggcaacacgtcgagcagctcgctctggtacgagctcgcctacgtcgaggccaagggccgcatgcgcaagggcgaccgcgtgtggatgatcggcttcggctccggcttcaagtgcaacagcgccgcgtgggagtgcatccgccccgccgccaacgccgacgggccatgggccacctgcatccaccgctaccccgtcgacatccccgacgtgctcaagcactaa</cdnaseq>

Protein Sequence

<aaseq>MTSSSGQLKRLKPLYQLAVNNILAVVAVPLAAAVVLKAAELGHE EILARARALPPAHLFLAAFVPAAAAVVYLMLRPRAVYMVDYACFRTSPNCRVPFATFL EHSRVWPGFEERSVRFMTRLLERSGLGEETCLPYAQHYIPPSRDLESSRAEAELIIFS AIDDLLAKTGISPQDIDILVVNCSLFAPTPSFTDMIINRYKLRKDVRNVHLSGMGCSA GLISVGLARNLLQVAPKGAHALVVSTETITPNYYMGQERAMLLPNCLFRMGGAAVLLS TNGAKARFRLARVVRTLTGAQDGAYHCVYQEEDGRGNVGINLSKDLMSIAGDALKANI TTMGPLVLPASEQLLFALSFMARKVLSGRIKPYIPDFRTAFEHFCIHAGGRAVIDELQ RSLTLSDEQVEASRMTLHRFGNTSSSSLWYELAYVEAKGRMRKGDRVWMIGFGSGFKC NSAAWECIRPAANADGPWATCIHRYPVDIPDVLKH</aaseq>

Gene Sequence

<dnaseqindica>105..1562#gagagccaagctgcgacgccactcgagggcacgacacaagctgacgtttcccttaacccaaacggcggcgcgaggaagcagccaatcaatttcctcgtagaggcatgacgagctcgtcggggcagctcaagaggctgaagccgctgtaccagctggcggtgaacaacatcctcgccgtcgtcgccgtgccgctcgcggcggcggtggtgttgaaggcggcggagctcgggcacgaggagatcctcgccagggcgcgcgcgctcccgccggcgcacctgttcttggccgcgttcgtcccggccgcggcggcggttgtctacctcatgctccgcccccgcgcggtgtacatggtggactacgcgtgcttccgcaccagccccaactgccgcgtcccgttcgcgacgttcctggagcactcccgcgtgtggccgggcttcgaagagcggagcgtccggttcatgacgcgcctgctcgagcgatcgggcctcggcgaggagacctgcctgccctacgcgcagcactacatcccgccgtcgcgcgacctcgagtcatcccgcgccgaggccgagctcatcatcttctccgccatcgacgacctgctcgccaagaccggcatctccccccaggacatcgacatcctcgtcgtcaactgcagcctcttcgccccgacgccgtccttcaccgacatgatcatcaaccggtacaagctccgcaaggacgtgcgcaacgtgcacctctccgggatgggctgcagcgcggggctcatctcggtgggtctcgccaggaacctgctccaggtcgcgcccaagggcgcgcacgcgctggtggtgtccacggagaccatcacgccaaactactacatgggccaggagcgtgccatgctgctgcccaactgcctgttccgcatgggcggcgccgccgtgctcctctccaccaacggtgccaaggcgcggttccggctggcgcgcgtggtgcggactctgaccggcgcccaggacggtgcgtaccactgcgtgtaccaggaggaggacggccgcggcaacgttgggatcaacctctccaaggacctgatgagcatcgccggcgacgcgctcaaggccaacatcacgaccatgggcccgctggtgctcccggcgtcggagcagctcctcttcgcgctctccttcatggcgcgcaaggtgctgagcgggcggatcaagccctacatccccgacttccgcacggcgttcgagcacttctgcatccacgccggcggccgcgccgtgatcgacgagctgcagcgcagcctcaccctgtcggacgagcaggtggaggcgtcccgcatgacgctccaccggttcggcaacacgtcgagcagctcgctctggtacgagctcgcctacgtcgaggccaagggccgcatgcgcaagggcgaccgcgtgtggatgatcggcttcggctccggcttcaagtgcaacagcgccgcgtgggagtgcatccgccccgccgccaacgccgacgggccatgggccacctgcatccaccgctaccccgtcgacatccccgacgtgctcaagcactaaccgagtcactcacaactccagcatcctctctgtgttcgtgcccgatcacaatcgattcgtgcaaaaataattatcactaacagtttgagagacaccgagggctgacgtgtgtagttgccgcggtgatcgtcgtgtcaagacaggtcatggtacgtctgcggcgcggcgcggttcaggctggtgcgtctgcggcgcggcgcggcgcgacgcggggggggggggggggggggggggtttaattggttcgatcgctttaccactcgcttcagctgaagtactccatatattgatacacaagtttggtgttacccgtgatgtacttagtagtggtcccatgtgtctcgcttttattttctttttctcttcatttatctcttccttgatgtactgatactgtttatcacagggaaaagggcaccatcgatcactctatccaaaagcatgtaactttgacagaaatgaaacttccagcggtacaaagttgctcct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0731900, RefSeq:Os02g0731900