Os02g0735200

From RiceWiki
Revision as of 02:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0735200| Description = Glutamine synthetase shoot isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS28)| Version = NM_0010545...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0735200

Description

Glutamine synthetase shoot isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS28)

Version

NM_001054580.1 GI:115448530 GeneID:4330649

Length

3696 bp

Definition

Oryza sativa Japonica Group Os02g0735200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31561641..31565336

Sequence Coding Region

31562069..31562221,31562405..31562564,31562658..31562749,31562837..31562911,31563039..31563167
,31563284..31563371,31563486..31563592,31564013..31564061,31564170..31564273
,31564476..31564515,31565206..31565279

Expression

GEO Profiles:Os02g0735200

Genome Context

<gbrowseImage1> name=NC_008395:31561641..31565336 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31561641..31565336 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttctctcaccgatctcgtcaacctcaacctctccgacaccacggagaagatcatcgccgagtacatatggatcggtggatctggcatggatctcaggagcaaggctaggactctctccggccctgtgactgatcccagcaagctgcccaagtggaactacgatggctccagcaccggccaggcccccggcgaggacagtgaggtcatcctgtacccacaggctatcttcaaggacccattcaggaagggaaacaacatccttgtcatgtgcgattgctacacgccagccggagaaccgatccccaccaacaagaggcacaatgctgccaagatcttcagctcccctgaggttgcttctgaggagccctggtacggtattgagcaagagtacaccctcctccagaaggacatcaactggccccttggctggcctgttggtggcttccctggtcctcagggtccttactactgtggtatcggtgctgacaagtcttttgggcgtgatattgttgactcccactacaaggcttgcctctatgccggcatcaacatcagtggaatcaacggcgaggtcatgccaggacagtgggagttccaagttggcccgtctgtcggcatttctgccggtgatcaggtgtgggttgctcgctacattcttgagaggatcaccgagatcgccggagtcgtcgtctcatttgaccccaagcccatcccgggagactggaacggtgctggtgctcacaccaactacagcaccaagtcgatgaggaacgatggtggctacgagatcatcaagtccgccattgagaagctcaagctcaggcacaaggagcacatctccgcctacggcgagggcaacgagcgccggctcaccggcaggcacgagaccgccgacatcaacaccttcagctggggagttgccaaccgcggcgcctcggtccgcgtcggccgggagacggagcagaacggcaagggctacttcgaggatcgccggccggcgtccaacatggacccttacatcgtcacctccatgatcgccgagaccaccatcatctggaagccctga</cdnaseq>

Protein Sequence

<aaseq>MASLTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPV TDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPI PTNKRHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCG IGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVAR YILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEIIKSAIEKLKLR HKEHISAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRP ASNMDPYIVTSMIAETTIIWKP</aaseq>

Gene Sequence

<dnaseqindica>3116..3268#2773..2932#2588..2679#2426..2500#2170..2298#1966..2053#1745..1851#1276..1324#1064..1167#822..861#58..131#accaccctccttgttacagctgtgccgcctcttgcttcctcctcctcatcgtccgccatggcttctctcaccgatctcgtcaacctcaacctctccgacaccacggagaagatcatcgccgagtacatatggtactatgatattattgttatcttcttcttcctttcggatctcttcttggctcttggttttgatggttcttttcatggcgacgaacgggttattgttttcttggttttgatgggtagggatatttcgggggatttcgggaggggtgctcctcatagtttgtgcggattcgtagaaggtttcgtttcttttcgcttttccactcgatgactgaagcggcggcggcggcggcggtggtgatcttgttgttcttctcttcctctcctctgctttctcctgttcatgtcaccaccgagtaaaaatcgttcttttccgtttcttttttttttcgccgtggattactgttcaaccccggttttcttgatacgcttgacgagagatggagattacgagtacgagcagtactctcttagtttttgtccttttgggggaggatgatctctgaagtggcagcctctgtctgccacctggtcctctctgcgccaccatttggccacggcgagatgctctcttgttcggttggtgcatggatttaaatctcatcccctaatcacgcgtacttttggtcaaagatgcaaagctttcgatcttaaccaccttcagatcgcaagattactgttttttggtgctcattaagccatggtgataactgataagtggtgtttttctttttctccttgtttttaatgcaggatcggtggatctggcatggatctcaggagcaaggctagggtaagataagattcccagaacaaggaccccatgatcctgtttgttactactcatatgtcttatcactttttctgccaagttatccactggctgagctgttcttgcgcttatattatcatccagagccttgctactcctaaacagattagattctcttttttttttatcaatcatattaaattttggttggttggtggtgcagactctctccggccctgtgactgatcccagcaagctgcccaagtggaactacgatggctccagcaccggccaggcccccggcgaggacagtgaggtcatcctgtagtaagtatcttttcatggcaaatcagagtgaaaaaaataaactctgtttttttaattatgtttttactttggatgcaagcagtaattttttgttcttccatcttgcagcccacaggctatcttcaaggacccattcaggaagggaaacaacatccttgtaagtggtgaccactttttcagtttgtcatggatgtgatttatattctgcagtgtacatccatctctgttcatccagatcagcacatgtctataaaaactgtgtgctgatttattcggttcaaactacatatgggatgtactagtagatgcaccactgaaggggggaaaaacttaatttaatcacttcaggtgtaaaagatgaactattttttgcactgttgaacattaaattttctttttttacctgtttctgatgtcatgggatgtgatcttgattagcgctttcactgtatttttgactcctgcgatcatctgttctacctaaccttatggctagttgaggaatgaatccaatgggttgtttcgtcaccatctcgaataattggcactttattttctaaattatcgtaattcacaggtcatgtgcgattgctacacgccagccggagaaccgatccccaccaacaagaggcacaatgctgccaagatcttcagctcccctgaggttgcttctgaggagccctggtatgcccactaatcttttttgccgaatgattatcgcaacgtgtcacagccatctcagcataattccctttctcataatggttagttgatcttctttgttcttgcaaattataggtacggtattgagcaagagtacaccctcctccagaaggacatcaactggccccttggctggcctgttggtggcttccctggtcctcaggtacaatcatttgtctgtttgattgtggcttaattactaaactgatatggtcaaaccaatcttcaagtgtgacctaactaatactgatcttactctttttgtgtgtgcgtattcagggtccttactactgtggtatcggtgctgacaagtcttttgggcgtgatattgttgactcccactacaaggcttgcctctatgccggcatcaacatcagtggaatcaacggcgaggtcatgccaggacaggtgaacactactctcaaaccttgccatttctatcgtcttgaattagtggagtacatttctgaccatgctaatatcgtgatcagatctataattggtaatgttattaacattgtgatcggtttttcagtgggagttccaagttggcccgtctgtcggcatttctgccggtgatcaggtgtgggttgctcgctacattcttgaggtatggataatgacattcttctatcaatatctcaaattgtgattcagaacggtctgatcgaatgccactgcccctaatttttttcagaggatcaccgagatcgccggagtcgtcgtctcatttgaccccaagcccatcccgggagactggaacggtgctggtgctcacaccaactacaggtgagggatgcttgaacatgaacagattgatatggtttgtgttactctttcatattatactactctgctgatcacgatcacgtcggctttcagcaccaagtcgatgaggaacgatggtggctacgagatcatcaagtccgccattgagaagctcaagctcaggcacaaggagcacatctccgcctacggcgagggcaacgagcgccggctcaccggcaggcacgagaccgccgacatcaacaccttcagctgggtacgcgcctccgtcttcttcttcctcctcctctgaaacacctgaaattcatgtcaaattacaagtcccgatcatgaaaaacacctgaaattcatgtcaaattacaagtcctgttcatgaaaaacagctgaatttcatgtcgaaataagtcctgatcatgaaaacacaaacaaatttttgcagggagttgccaaccgcggcgcctcggtccgcgtcggccgggagacggagcagaacggcaagggctacttcgaggatcgccggccggcgtccaacatggacccttacatcgtcacctccatgatcgccgagaccaccatcatctggaagccctgaagcggcttcttgacgccacgacatcctcgtcatcgtcctccccagctcgccgtgtcgctccggttgctccattgatcggacgatctggtgaattgcatttgtgctgggagaagtaaaaaaaaaaggaaagagaaaaaaaagaaaatcacgccaaaaaaaattctcattccatttcgatttggttgcatgctaccactactactacattgctcatctgccatttagattagctcctttttcttcgtcttttgggtgagtgcgtttgggtgctcttgtgtaatcctccaataatggccgtacctacggtacttgtcccatcctgtggatcatcgtcctcctttccacatgtggttttatcatcattgttattagtgatcacctttatataaagttcttgctgggcttccaatagccgtggcttttgcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0735200, RefSeq:Os02g0735200