Os10g0443000

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0443000| Description = Soluble quinoprotein glucose dehydrogenase domain containing protein| Version = NM_001071237.2 GI:297610559 GeneID:43...")
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Gene Name

Os10g0443000

Description

Soluble quinoprotein glucose dehydrogenase domain containing protein

Version

NM_001071237.2 GI:297610559 GeneID:4348735

Length

4095 bp

Definition

Oryza sativa Japonica Group Os10g0443000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16395655..16399749

Sequence Coding Region

16395655..16395996,16396503..16397011,16399024..16399050,16399263..16399749

Expression

GEO Profiles:Os10g0443000

Genome Context

<gbrowseImage1> name=NC_008403:16395655..16399749 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16395655..16399749 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcggtgactgctgcggcggcggtgccgggggagccgccgaggcgagggcggccggcgccggcggcgggaggaagcgggggtgtgtggggacggcgctcgccctcgtggccctggcggccgccgcggcggtcgccgtcctggagggcaccgccggcggggtctcctacgtgggcgacgggtggctccacgagtgcgccaagtgggacgccgacgggcggcgcctgctcgtgtccaacttcttcggcgccggcgtgtccgagctccgcgccgaaacgaaagggaaggagaaggaggaggagcgcgtggtcctagcggatcccgacgttgccgggagggtcgcgctgggtctcaccgtcgacgcgccgagggggcggctgctcatcgtctacgccgaccggatgccgcggttcaggtactccgccgtggccgcgtacgagctcgcctcgtggcgccgcctcttcctcacccgcctcgacggaccagggaacgtccatgaatggagcttcgcaggtgattcaacgctcgccgacgacgtggccgtcgacgacgaggggaacgcgtacgtgacggacgccaagggcaacaagatctggaaggtgagcccggacggcgagccgctgtccgtcatcaagaacgccgccttcttccagaggccggggtggatcaacaacctcgtcggcctcaacggcatcgtctaccaccccagcggctacctcctcgtcgtccacacctccggcggcgacctcttcaaggtcgacccggagacggggagcgtgcgcgtcgtccaggtgaagggctcgctgaaggccggcgacgggctggcgctgctgtctccggcgaggctggtcgccgccggcctggtgagccggctggtcgagagcgacgacgactgggagaccgccgccgtcaccggccggcacgtcggcccggctcaccggatcggctcgtcggcgacggtgaaggacggcgacgtgtacatcaaccacatcatcgggttcggcctcggcaagaagacgcatttctggcatgatgctgggacttcgtcacaggcagcaggcacgtcgagtcagggtccaccactggaccatgccgggacatcgtcggagtacaggtgggcttccgccttgcacttcgacatcagcgacttcgacttccagcactcgacagaggacgtcatcggcccctcacagctgagaggcgcaccgctggtgcagacgcaggaccagtcgccctctactccgccaccatatagtcgtgctacccgtgctgtgccaccggatcgcttcacgtactcccaggaccacatgcgagcacaggcccagaggaccaagtgtggtcgcggcgcggggcagggccagtag</cdnaseq>

Protein Sequence

<aaseq>MCGDCCGGGAGGAAEARAAGAGGGRKRGCVGTALALVALAAAAA VAVLEGTAGGVSYVGDGWLHECAKWDADGRRLLVSNFFGAGVSELRAETKGKEKEEER VVLADPDVAGRVALGLTVDAPRGRLLIVYADRMPRFRYSAVAAYELASWRRLFLTRLD GPGNVHEWSFAGDSTLADDVAVDDEGNAYVTDAKGNKIWKVSPDGEPLSVIKNAAFFQ RPGWINNLVGLNGIVYHPSGYLLVVHTSGGDLFKVDPETGSVRVVQVKGSLKAGDGLA LLSPARLVAAGLVSRLVESDDDWETAAVTGRHVGPAHRIGSSATVKDGDVYINHIIGF GLGKKTHFWHDAGTSSQAAGTSSQGPPLDHAGTSSEYRWASALHFDISDFDFQHSTED VIGPSQLRGAPLVQTQDQSPSTPPPYSRATRAVPPDRFTYSQDHMRAQAQRTKCGRGA GQGQ</aaseq>

Gene Sequence

<dnaseqindica>3754..4095#2739..3247#700..726#1..487#atgtgcggtgactgctgcggcggcggtgccgggggagccgccgaggcgagggcggccggcgccggcggcgggaggaagcgggggtgtgtggggacggcgctcgccctcgtggccctggcggccgccgcggcggtcgccgtcctggagggcaccgccggcggggtctcctacgtgggcgacgggtggctccacgagtgcgccaagtgggacgccgacgggcggcgcctgctcgtgtccaacttcttcggcgccggcgtgtccgagctccgcgccgaaacgaaagggaaggagaaggaggaggagcgcgtggtcctagcggatcccgacgttgccgggagggtcgcgctgggtctcaccgtcgacgcgccgagggggcggctgctcatcgtctacgccgaccggatgccgcggttcaggtactccgccgtggccgcgtacgagctcgcctcgtggcgccgcctcttcctcacccgcctcgacggaccaggtgcgtgatggatggcctcctcctggccgcacgatctttacctttacctcctccgtggactcgtcgtgtgatcgtgtcaataatttttttaactaatcggtggggcctcggtatttgacggcgccgaaaagcgttccatgggaaggtacagtatgacatggggacagattcgctgtggctgcatggtttgcgcgtgtgcatttaatttgtagggaacgtccatgaatggagcttcgcaggtagtacgaagaatatatgggccgtgtttagttacaaagtttttctttaaactttcaacttcttcatcacatcaaaatttttctacacacacaaactttcaacttttccgtcacatcattctaattttaaccaaacttcaaattttaatgtgaactaaacacacccatggtggttggttgaacttctgtttgggttctctgggacaagagagatatgatgaagagcagcagcacattttcaggcctaaaacccaaacaagatttgccatttagatccactaaagtcagaagcttaggccctgtttagatgggactaaaacttttaagtccctatcacatcggatgtttgaatattaattataaatattaaacgtagactattaataaaacccatccataatcttggactaattcgcgagacgaatctattgagcctaactaatccatgattagcctatgtgatgctacagtaaacattctctaattatggattaattaggcttaaaaaatttgtctcatgaattatctttcatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaagacagggactaaagttaagtccctggatccaaacaccaccttattttccttcccttcgtcaccagacaccaacttccctctttcgctactccagtttacatctagcgaaagttttactgacagaactgaacacttccggactccacgtcctctcgtgttcgcatactaaaatcaaccagaaaccagtgaggagaagctgcgagttcacactcaagtagtaatccagaagtggcttttttccaggcttaacaccgactgcgcgcttgttggctgcctcttccccttgatctctaggacgtccgaagcctcctttgctcctcttcccttttaacttctgtgcaggtccaaaatcttgcttttaggttcgtgagcgtgccagttgatttgatcctacaatcaacaagaacaaaagacaaaaaaaaacaaggttaaatcttagatgatagtaacaacaggccggtctgggcatctactacatttcgctgtcaagacatgccatccccaatcacttgaccaatgtggcgctcatgttgcaaggaacaccgaaatttttttctttgtccgtcgccatcgaagttaatcttgccgattgacctcatgcctgatgcatccattttgtggtcctgcgactcacctttacgactacgaggacgccatgtgcttaaggactgaagtatgtacatgaaacaacgagtgagtgataagtgatgggtacttgggagaggaggcttggtagcgaattgcttctcctcttaccacgaggatagaggcgcgattccatgataagttatcttgatgatgatttttcactctttagaaataagatatgataattcggcgtgctgacttatatgttaccgtatacagccgctaaaaagcggcaaatcatcaaatttccacgggacaatgcccaccgtctccactgccaagttctacccttctaaggcaaaccaggaaatatcaaatttttcactcttatctttaaccgacatatctatacttcttacagtcggctcctagcgccgctcttcctcatccgcctcgaccggccaggtgcgtccgcgtgtccgcgccatctatggccgccatgggtttgtagcttctaggtgtccatttcaagcattgttcactcgagagggagccaccaatctactttctccgtttcataatgtaagtcattctagtattgtccacattcttatagatataaatgaatctagatatggaactatgtctagattcattaacatctgtataaatatggggaatactagaatgacttacattatgaaacggggggagtattgtttatttactctcctctgagcaaattacaacgattattatattttccagtttgtagtgaaattctgggggttcttgccgttcgagaatatgaatagattgttgtctaattttgtaggtgattcaacgctcgccgacgacgtggccgtcgacgacgaggggaacgcgtacgtgacggacgccaagggcaacaagatctggaaggtgagcccggacggcgagccgctgtccgtcatcaagaacgccgccttcttccagaggccggggtggatcaacaacctcgtcggcctcaacggcatcgtctaccaccccagcggctacctcctcgtcgtccacacctccggcggcgacctcttcaaggtcgacccggagacggggagcgtgcgcgtcgtccaggtgaagggctcgctgaaggccggcgacgggctggcgctgctgtctccggcgaggctggtcgccgccggcctggtgagccggctggtcgagagcgacgacgactgggagaccgccgccgtcaccggccggcacgtcggcccggctcaccggatcggctcgtcggcgacggtgaaggacggcgacgtgtacatcaaccacatcatcgggttcggcctcggcaagaagacgcatgtcatctccaaggcggcgttcgcgcctttgtaggcgaggatcatgcttcaaggttctttgatctcgtgttacttcggtgacagattgatggttttatgcctgaggagtatgcatccatgcatatgctcgtccaacgtccttttttgcaatccattgccagtttgtttagaaattagaacaatctctgctgcttgcaattgcacgtgttaattttgtgcaaataccagattaatatacgaagagtgcacacctgactgtcaatagaagtatgactatgaacttgaactagtcctactatttcagtttcaattataggagagtaaatttcgcaataatgcaattattttgtcaaccatatggacagggattttgattagtgacttgtacagcaggcaagatgattccatttcccagggtttcatctaatttaggtgatgcttccgaagaccgcagagtgccgtgtgtccggggctctctccatccatgattaatgatactctccccagttctggcatgatgctgggacttcgtcacaggcagcaggcacgtcgagtcagggtccaccactggaccatgccgggacatcgtcggagtacaggtgggcttccgccttgcacttcgacatcagcgacttcgacttccagcactcgacagaggacgtcatcggcccctcacagctgagaggcgcaccgctggtgcagacgcaggaccagtcgccctctactccgccaccatatagtcgtgctacccgtgctgtgccaccggatcgcttcacgtactcccaggaccacatgcgagcacaggcccagaggaccaagtgtggtcgcggcgcggggcagggccagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0443000, RefSeq:Os10g0443000