Os02g0739600

From RiceWiki
Revision as of 02:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0739600| Description = Similar to Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)| Version...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0739600

Description

Similar to Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)

Version

NM_001054603.1 GI:115448576 GeneID:4330673

Length

4111 bp

Definition

Oryza sativa Japonica Group Os02g0739600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31805689..31809799

Sequence Coding Region

31805989..31806033,31806511..31806576,31806671..31806724,31806857..31806928,31807016..31807111
,31808251..31808328,31808853..31808932,31809030..31809711

Expression

GEO Profiles:Os02g0739600

Genome Context

<gbrowseImage1> name=NC_008395:31805689..31809799 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31805689..31809799 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcggccatcctcctccgccgcgtcccccccgcgcgggcccaggccacggcgctcatcgcggcgcgctcgatctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcgtcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcgacatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctcatccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccgccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcacgcggcggcgacctcgtctccgcgttcgcggagctcatgggccgccaggctgggtgctcccgcgggaagggcggatccatgcatttctacaagaaggacgccaatttctatggtggccacggtatcgtcggcgcccaggttccccttggatgcggtctcgccttcgcgcagaagtataggaaagaggaaactgctacgtttgccctctatggtgatggtgccgcgaaccagggccagctctttgaggccctcaatatatcggctctttggaagctgccagctatattggtctgcgaaaacaaccattatgggatgggaaccgctgagtggagggcagcaaagagccctgcctactacaagcgtggtgattatgtgcctggattgaaggttgatggaatggatgttcttgctgtgaagcaggcatgcaaattcgcaaaagagcatgctattgcaaatggcccaattgttcttgaaatggatacctacaggtaccatggccattctatgtcagatcccggaagcacttaccgtaccagggatgagatctcaggtgtaagacaggagcgtgatccaattgaaagggttaggaagttgattttggctcatgacctagcaactgctgctgagctcaaggacatggagaaagaaatcagaaaagaagtcgatgatgccattgcgaaagcaaaggagagtcctatgcctgatacttctgagctctttacgaatgtatatgtcaagggttttggtgtggagtcatttggggcagacaggaaggaattgagagctactcttccatag</cdnaseq>

Protein Sequence

<aaseq>MAAAILLRRVPPARAQATALIAARSISDSTAPLTIETSVPFTSH IVDPPSRDVTTTPAELLTFFRDMSVMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVG MEAAITRSDSIITAYRDHCTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDAN FYGGHGIVGAQVPLGCGLAFAQKYRKEETATFALYGDGAANQGQLFEALNISALWKLP AILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHAIA NGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAE LKDMEKEIRKEVDDAIAKAKESPMPDTSELFTNVYVKGFGVESFGADRKELRATLP</aaseq>

Gene Sequence

<dnaseqindica>3767..3811#3224..3289#3076..3129#2872..2943#2689..2784#1472..1549#868..947#89..770#aaaaatctctcttcctatctccttcctccccacccacccccaaatccacctcgccgtcgccgccgcgaaaccctaggcagccatagccatggctgcggccatcctcctccgccgcgtcccccccgcgcgggcccaggccacggcgctcatcgcggcgcgctcgatctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcgtcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcgacatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctcatccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccgccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcacgcggcggcgacctcgtctccgcgttcgcggagctcatgggccgccaggctgggtgctcccgcgggaagggcggatccatgcatttctacaagaaggacgccaatttctatggtggccacggtatcgtcggcgcccaggttccccttggatgcggtctcgccttcgcgcagaagtataggaaagaggaaactgctacgtttgccctctatggtgatggtgccgcgaaccagggccagctctttgaggccctcaatatatcggctctttggaagctgccagctatattggtctgcgaaaacaaccattgtgagttcctgtgccgcttttgggaatcatgattgcatcgtgatatctgcttgttcatttgatgtgatatgatcttgattcgatttcccttgtgcagatgggatgggaaccgctgagtggagggcagcaaagagccctgcctactacaagcgtggtgattatgtgcctggattgaaggtgatgtgaactcactgttgttacttttgctcatcgtagtgactggattgatcaatgtttagtattcttgtaatgttggttcccaattgtgatatgtgatttgcttgcagtggattttaattttagagtctgacctgataagtcataagactctgcctatttcttgagttgcagaagagactgccttggttgaaggttatagatgcttttagcatgtgctatctgttctaacaagtattggaaaaaaagattgtaaatcacaatggttacctaaagacaatttcgatgtgaccttagtttatagctttgtagattgaagttaattgttctttaaatgcatttcatcttctgtagcttattgtctatggtattatacatttggtttgtacttttaagtttgagatgacacattctttcttctttctttcctattttgaattatattgacaactgaaatcttttcattttatgtttaagttctacttaatatctgccactgacatcatctaattgctttggtgtaggttgatggaatggatgttcttgctgtgaagcaggcatgcaaattcgcaaaagagcatgctattgcaaatggcccaattgtgagtaaactttgtcgtgttaatagtatgcatacttatgtagcgcaattatatagatttgctactgttgaactacagtggcttaggattcacatttcttgtttattttcacatgaagaatcagtgctggcaacttgagcagcttaattgacctacattttcctgttcagtcacttaaattctggatctttttgttcatcaacatatcctgaatctttctatgaaaatttgatggtagctgctagttgatcaattgatgagtaaaatacactatggcaattaggtgctttacaccagagagcttgtttcttttgtcatggttgtcctatttgtgttttatacactcacagagtaacttcatagattaattgtgaactagagttggaatagattgttttatgtggaagttccttcgaagggacagcactttgtttctgatacatagctgctgtgtccttgagcgactttggttactgctaggacaacattgtgacgtgaaatatggaataacctaatagcgatacactacttatggtcttatataatatgtttttggttgctcattgatgttattaaatttagagtaaatttcacaaaactatatgttttgtagttcaagttgcagaaaaccacacacactttgacacctggcacttaagtacatatattttggtagtgtagtttcacaaaaccacactatcaatgaatggattcatccgcgagatgacgtgactgtttcacctaggacgaggacatggcatcctattaccagcaatcgcacgaaattaataggatgtcgcgtcctcatcctagatggaacaaccacgccatctcacgggtgaatccatttatcgatagcgtggttttgtgaaactaaactaccaaaatatatgtacttaagtgccaagtgtcaaaatgtgtgtggttttctacaatttgaaccataaaacatgtagttttgtgaaatttactcttaaatttaagtaacagatttatttactctatggatgcttaagtcctgttggtacttgacttaacatggttgtgcctgctagcagtttgtagcaattcacccttaatgaaatgtttcagttttagtaagtgatggttactaatgtttccccactctttgtatttaggttcttgaaatggatacctacaggtaccatggccattctatgtcagatcccggaagcacttaccgtaccagggatgagatctcaggtgtaagacaggtgaggatcctgtgacccttaaatttgtggtgtaattaacgccagatgtttggtttttaacgaattattgttttatcatgccaacaggagcgtgatccaattgaaagggttaggaagttgattttggctcatgacctagcaactgctgctgagctcaaggtatcatatcatatgtcaaatatgtttaatgtttaagtgatgtataatgacagtcgtgactagagatgcaatttcatttagtggtatattctctgtattattatgattcattaacttgttcttttgtctcaggacatggagaaagaaatcagaaaagaagtcgatgatgccattgcgaaagcaaaggttcttgctgcattttgcttctttttttttttgtttacttgttttgctttgaattagattttcactcacatatacccctttttaatatttgcaggagagtcctatgcctgatacttctgagctctttacgaatgtatatgtcaagggttttggtgtggaggtaagttcagaagtctaactcatctaagtcgtctcagatattgaagtctgcattattatttccttttactaagacaaacactgcacttgattaaaacacaaacacattctcttcataatgtgaagttacagcttggtgtatctcttttcttactagttctctaagaagttgaagtgtagaaatttcaatttatggtgcacttattttttcaactgcttatggaggctaatggagcagtacactggcttgtaatagcggattttttacaattttaaattaaaccacaaatttcagcttatgttttatacgcacgtcttgtttggttagagtgaacttattttgcccataaccacacgataataactcacaagcactgaatgagcctgtatggttttaaccaggtctcattgaattgacctcagctgcattttgaacgtttgaagatgaaccatttctaaccgaaccttgattttgcagtcatttggggcagacaggaaggaattgagagctactcttccataggctgacaacgagaagatggcggcattatttcttctaatatgatatgatagcctggagaaataagcattggtgaagaagtcctcaggcatttctgccattctttgttgcaaaaatgaacctgtatagagatgcgtcaggaagaatcgcaccatatttgtttttgcttcttttccttttctgcaattcatctaaccgctgttgtcaggcttcaaattcaagcttgagactttgcctgcgtgattgctccttttcggaagaaaatgttcaagattatacatctagagtataaattgcctcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0739600, RefSeq:Os02g0739600