Os02g0740300

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Revision as of 02:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0740300| Description = AAA ATPase domain containing protein| Version = NM_001054606.1 GI:115448582 GeneID:4330676| Length = 6614 bp| Defin...")
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Gene Name

Os02g0740300

Description

AAA ATPase domain containing protein

Version

NM_001054606.1 GI:115448582 GeneID:4330676

Length

6614 bp

Definition

Oryza sativa Japonica Group Os02g0740300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31845470..31852083

Sequence Coding Region

31845922..31846071,31846151..31846211,31847242..31847364,31847626..31847708,31848215..31848292
,31848743..31848874,31849053..31849096,31849334..31849458,31849836..31850137
,31850233..31850362,31850812..31850942,31851450..31851644,31851733..31852014

Expression

GEO Profiles:Os02g0740300

Genome Context

<gbrowseImage1> name=NC_008395:31845470..31852083 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31845470..31852083 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgcttctccgccgccgcctcccgctggcccgcctcctccggccgctgcaggccgaggcggcggcttccactacctcctcaccgccgcctctccagaaccgtcccgccgccgcgtcgccttcccacgcgctgggatcacgtttagggtttttgaatggggtaccaggtgccccgggggcgcgtgaggcttcggcgttcactacggccggcttcctcgccgccggcgcggccgccgctctcgcgtctctgccggtggcctacgccgatgccaatgagggcgttgtagactcggctgtaagctctgatgcggctgtgaaacctgtgaaccctgatgcggctgtgagctctgatgtggcggtgggggaggatctggcccataaggagaggaagaggataatagagctcattcagagccgagggatgccacacgggtcatacccgcaatttgatgtggcagtgaagggccaaaaggtggtcgttaaatttaatgtaccatcaacttgtagcttatcagaccttattgttgatctcgtaacacatatcggacttgaggcagaacaaggtggtggcggctctgagatgctactgcgtgcttggaacagtgtagctgcacgtcagataacgttgaaccctcacaagaagacaacgagcaatggagatgacaatgaagatgatctttgtgtcttgatatttgaaccacttgtgggatctcaatattctgtcagttcctatgaagttgaattcatcaagcgtggtggatttagtttgagagagcttgaagctttgacaagtgttttgaaattagtgggccagaaagatgttaagcaatcatcagggaagggcaataagtcatacacaacaagaaaaggaaatggtcagagatccaagcatgtaccatctatggaaaaaactatatctgatttagagggtatgggagttcgggtctatggatttgatgagacctcaagtattccaatggatggtagtggtactgttatgtgggagaacattgctggatatgaacctcagaaaagggagatagaggacactatcctcttggctttacagagccctgaagtgtacgatgaaattgcccgtgctacacgatgcaaatttgagacaaaccgacctcgagctgttttgtttgaaggcccaccaggcactggtaagacttcttctgctcgagttattgccaagcaagctggagttccgctgttatatgtgccactggaaatcataatgtcaaaatattatggtgaaagcgagcgccttttgggatctgttttttcacttgccaatgaccttcctgatggaggtataatttttctagatgaggtagactcttttgctagcgctcgagatagtgaaatgcatgaagctacacgaaggatattatcagtaattttgcggcagattgatgggtttgagcaggatagacgtgttgtggttattgctgcaacaaatagaaaggaagaccttgatcctgccctcatcagccgttttgattcaatcatttgttttgacttaccggatcagcaaacccgcgcagaaatatctgcccagtatgcaaaacatttgactaaatctgaattgtttcaattttcattggccactgaagagatgtcaggaagagatatcagggatatttgccagcaagcagaaagacattgggcatcaaagttgataaggggacaagtaccaaaaaatgataagggggagccgagtcttcctccagtcgaagagtatgttgcatgttctgaacaacgcagaagatctttgccgaatagaacaagtaaggaatcaagactccctgctttgaagttagcttga</cdnaseq>

Protein Sequence

<aaseq>MAMLLRRRLPLARLLRPLQAEAAASTTSSPPPLQNRPAAASPSH ALGSRLGFLNGVPGAPGAREASAFTTAGFLAAGAAAALASLPVAYADANEGVVDSAVS SDAAVKPVNPDAAVSSDVAVGEDLAHKERKRIIELIQSRGMPHGSYPQFDVAVKGQKV VVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAWNSVAARQITLNPHKKTT SNGDDNEDDLCVLIFEPLVGSQYSVSSYEVEFIKRGGFSLRELEALTSVLKLVGQKDV KQSSGKGNKSYTTRKGNGQRSKHVPSMEKTISDLEGMGVRVYGFDETSSIPMDGSGTV MWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDS FASARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALISRFDSIIC FDLPDQQTRAEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQAERHWASKLIRG QVPKNDKGEPSLPPVEEYVACSEQRRRSLPNRTSKESRLPALKLA</aaseq>

Gene Sequence

<dnaseqindica>6013..6162#5873..5933#4720..4842#4376..4458#3792..3869#3210..3341#2988..3031#2626..2750#1947..2248#1722..1851#1142..1272#440..634#70..351#ccggtagcctctcgagcgagccgacacgagcttcgaaatcgcaaacccagccacgcctccgccgccggcatggccatgcttctccgccgccgcctcccgctggcccgcctcctccggccgctgcaggccgaggcggcggcttccactacctcctcaccgccgcctctccagaaccgtcccgccgccgcgtcgccttcccacgcgctgggatcacgtttagggtttttgaatggggtaccaggtgccccgggggcgcgtgaggcttcggcgttcactacggccggcttcctcgccgccggcgcggccgccgctctcgcgtctctgccggtggcctacgccgatgccaatgaggtggtgtttatttttcctgtttgaaattttagtggcggcattttggaggtgagattttgcacgggctgagtttgattttgtgttacagggcgttgtagactcggctgtaagctctgatgcggctgtgaaacctgtgaaccctgatgcggctgtgagctctgatgtggcggtgggggaggatctggcccataaggagaggaagaggataatagagctcattcagagccgagggatgccacacgggtcatacccgcaatttgatgtggcagtgaagggccaaaaggttgtcctcctctcccaaacatttaggccatatcactgttgcttgttagtgctggaaaatatcttttttttttcagcggttttataaatctgagttaattttacactttatatcaaattgggccactaggctttagagttggtttggaactttgtgtgattggagcaattgattcagtgattaatgatatatggatttgggatgtattgtcgtgactactgaagtagacacactaaaatttgagttagttaagtctgagtatcagtgcaaggataatgtgatgtatgattttttttttaaaaaaaattgtaattgtgcgtggttgcttctagatcacaacaatgaaggttgtggatttgacatgcctattctgattacagttctggcagttgcatagcttatctctctgccattggcaaagcatctacaacaatgtgtaatcttcagtcgctcatttgataattattgttaattttctctgactcaacttgtttctttttctgataggtggtcgttaaatttaatgtaccatcaacttgtagcttatcagaccttattgttgatctcgtaacacatatcggacttgaggcagaacaaggtggtggcggctctgagatgctactgcgtgcttggaacaggttagcaaaagaaactggctgttattcacttcaccataaccattatctggtgatcttgtcctattcatcgcaaccacaaacagtactgtttcagctttgatctgtattgtgtacgttttcttgtggccatctttgttatgtatgtatgttcattctctgcttctaggctgcacaaattagatctctggcccatgatttctatctgtctagatgtaacttagttgtagctataagtagtaatgtttctttatccatgtctttatggattcctctaatttcaaagccttaaccctgcagcccccgctcccactttcctagttattcctatcatcagtgtttctgatacaatctccctgcaaatagcataatgatctttatccacgtcatagatccaatgtctgccaagttcctaatatttattatgttttaatcaagtgcgtctgttccagtgtagctgcacgtcagataacgttgaaccctcacaagaagacaacgagcaatggagatgacaatgaagatgatctttgtgtcttgatatttgaaccacttgtgggatctcaatattctgtcagttcctatgtatcctttattaagatattgaaagcaatatgtactgcccatttatcatcatgttaagattaaatgcaattccttaacattatgtgtattttcaggaagttgaattcatcaagcgtggtggatttagtttgagagagcttgaagctttgacaagtgttttgaaattagtgggccagaaagatgttaagcaatcatcagggaagggcaataagtcatacacaacaagaaaaggaaatggtcagagatccaagcatgtaccatctatggaaaaaactatatctgatttagagggtatgggagttcgggtctatggatttgatgagacctcaagtattccaatggatggtagtggtactgttatgtgggagaacattgctggatatgaacctcagaaaaggtttgtttactacaactctattttgtttttctcatttgtaagttttgagatgctttgtgtgttcaaagcacaataaacatttttcatatccgtaactttcaccactcaaagaagcaaataatttgcattagattaaaattagtatcgtggatatattatctacgtaattatgtgtgtgattgtctaagcataggggataaacatttccctgcacatatattttttccttcatggttatttggcatttccttgacatttgacacatcacgagtcctgtttgctgctcgtcaaagcttcctattgggcaattccttctatgtgttccttctgaaagtatagtttttaaacttggtgcatgtttctttttccatttatagggagatagaggacactatcctcttggctttacagagccctgaagtgtacgatgaaattgcccgtgctacacgatgcaaatttgagacaaaccgacctcgagctgttttgtttgaaggcccaccaggtgagtaacctgaatggtgctttgcgttgattggagtttctgtaccaagaaaccactgccattgcctttgcgttatcttgtttcatgatgttcatagcttggtaacagtagtagatagcttggtgacaccattgaaagtaaatatatgagatacccttttatgcactgctagtatggttgcttccatttcaagctgtatttgcatacttaacagttactttggtctcattgtttcaggcactggtaagacttcttctgctcgagttattgccaagcaagctgtaagtgatatcttattgagattgccccaaagtaattctgtgttataaaaaaagtgatactaagtactctcacgttttgtaaacttcttgattttacaaacatgctattcctttcttgcaacttttaagctgaattgtagttgtattaagctggttgattgcctttttcttatgacagggagttccgctgttatatgtgccactggaaatcataatgtcaaaatattatggtgaaagcgagcgccttttgggatctgttttttcacttgccaatgaccttcctgatggaggtataatttttctagatgaggtatgtttcatctttatagtatacaggtatcaagggcacttcaactgttgtaaaaatgtacaggaaatatactgcctagcatactggaactgtcaggatataccattgttcttttctgctgaaaggagttactagtttgatttttgttgcactgctggtttctaactgatatgtaccaccttccaatatgatactgaagatctagtttcacctgaaaaacaactaaactaaatgtcattcataatatattcccgagcaacactttttagaacataattctaacggagatatattgtggatttgtagggtacaaaaactgtatcacatgcatagcatgtttttcttcatttttattgggcagtttatagtataggggcatagtgaattttgtttgttggttatactaaggtattaatgcaacatcttgctatttgaacgtccatgttacaggtagactcttttgctagcgctcgagatagtgaaatgcatgaagctacacgaaggatattatcagtaattttgcggcaggtagggtttgtgtttgtttccatttaaactggatactggtaatctctgatgtaaatatgtttgttgagtttgtctatacttctaactgtcattttttttcactgtccatcagtgtttattgcaaacttggtaatactgtttaaacctgtgtaaaacataggagttttaactccaattaaataagggatggataaaatttcactgggctgcagaaattatgtattgtagctaaactattgtgcaggattttttcatgtttttttcctgcggttatttactattgctttctttattctgaaagtccattactgttctattgctttcttgaagtactgtaatatgatataggcatataaaccatgtcagcattatcacggaatcttgaaaccactaagttttgcgagaaatctttgtatgcagtctcttaggtgtcaccatcatgcttatggcaattgatgtcctagaatatattttttactgacactaaataaattgtctctatgaagattgatgggtttgagcaggatagacgtgttgtggttattgctgcaacaaatagaaaggaagaccttgatcctgccctcatcaggtatagtttaatcattcaccttttgttcctcttagcagcccagttaatttttcagatgtgtgcatgtttttgttttctattgtcattctctttttgttcctattacaagtccttgttaaattttcacatggagagtttgtacatgttcccttgcaagaattcatttcccagagaagcatatgatattatcctttgtatgggtttctgaagtaaatatcatctttttttaatttatcccctttttgtgttgttaatttgcagccgttttgattcaatcatttgttttgacttaccggatcagcaaacccgcgcagaaatatctgcccagtatgcaaaacatttgactaaatctgaattgtttcaattttcattggccactgaagagtaagtcctttctgaaccttctagctcatggtctgcatatttattttacctgttcatgtctagctgattgggcacttcaaattttgatgttgcattggagtcctatagatacttatctacccagtgtcttgtaaagcttgttattttggtttagtatatttatgttttgttaaatatatataaaagtcatgctgtgtgatgcagtccaggtttaaaaatatgtcctggaaacgaccactatcaggattcagctagtagttcctggcagttttgggctagggtgaattaccctactctgttagttgaacttgacgcacatttgtttagaaaccaattatctttcattaaacatccaagtttcctctggattgtattactaagatggtgaaatgcgttccataatccattgaaagatcagtactttcaagaagttcaaagaagtataacgatatttgtgtctctaatacaaatgtaaacacctcttcaaagcttgacttcagtaagctgcttgaaggagctcgctaccgttggatatattgggtacacatggttgaaagatcagtacttataagaaattcaaagaattataattatatctgtgcctctgatacacgtcttcaaagcctgtcttcagtaagctatttggcccttttattcagaactgatttattgaattcaaatgaggtgcttcattttgtagagtaggctgcatgtgttcatatgttccttgcttctctattatttcaccattaatcactgagtgttcagtgctcgtacctttttagtcatggattcatgtgcgtgtatactatggatcataccagaaaacatatataggcatttgtgaccatgactcagctaggttacatgtgctcagtgctgaccatcactatactactgtaatatctgggaacatcattggtgatccgcgtggctagaaatgtgttctgttctgaaatctgaactacagatagactgccctgggcacatgcagttcatttgtcttgctaattatggatattggatgcaggatgtcaggaagagatatcagggatatttgccagcaagcagaaagacattgggcatcaaaggtatgttatagtggtcgaagcttattaccccccttccccatgatcagtggctcagtcgatttttcatcttcttctacagttgataaggggacaagtaccaaaaaatgataagggggagccgagtcttcctccagtcgaagagtatgttgcatgttctgaacaacgcagaagatctttgccgaatagaacaagtaaggaatcaagactccctgctttgaagttagcttgaggaatgtacttatctttacagttccacaccatatgttaaatgatgtgtatatagattttaggcatctcttctcgtgacgcatgccggcgcatgaaaattgcgtttacccaaattttgattgtcctatcacagcacgacaaaacgtataattctagagatgaagtaacagtgggtaatgcattttgcaatgtttgctggccgccttgggtcgcggtcctcgaggataggtgatccggaccaacaactctggaactgtcgagatatctgctaggaaatactcctattttcctgagaaagcgtagaagttgtgtacgtcaatgcattaagagacaataaaacaacacaatgttcttacaaagaaatgtacattgccttggaacttgtgtacctatatgcaagcatgcagtattgccaaatacaatggtcataacagagaatggaatttgaaatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0740300, RefSeq:Os02g0740300