Os02g0741300

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Revision as of 02:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0741300| Description = Glycoside hydrolase, family 47 protein| Version = NM_001054615.1 GI:115448600 GeneID:4330685| Length = 4721 bp| Def...")
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Gene Name

Os02g0741300

Description

Glycoside hydrolase, family 47 protein

Version

NM_001054615.1 GI:115448600 GeneID:4330685

Length

4721 bp

Definition

Oryza sativa Japonica Group Os02g0741300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31890840..31895560

Sequence Coding Region

31890853..31891016,31891937..31891979,31892080..31892145,31892241..31892302,31892459..31892558
,31892658..31892840,31893321..31893369,31893457..31893636,31893762..31893882
,31893980..31894061,31894151..31894236,31894379..31894479,31894614..31894755
,31894856..31895006,31895078..31895305

Expression

GEO Profiles:Os02g0741300

Genome Context

<gbrowseImage1> name=NC_008395:31890840..31895560 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31890840..31895560 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgacctcctccccggccgcgccgcccagtgccggcgcggctcgtcgccgctgcggtcctcctctcggctctcgccgggggagccgcggcgggcgccgccatcgccggcgatgggtacgggcgcggcaggaggctgtacatgaggaacaaggtcctggagatgttttaccatgcttatgacaactatatgacttatgcatttccacatgatgaattgaagcctctaaccaaaagtttcactgactcccttagtgagcttggcaacctaaatcttgaacatttgccaaatgattacaatggatctgcacttacactagtcgaatcgttgtcaagtcttgttgtcttaggtaacctcacggagtttgaaagaggagttctctggctttcagagaacctaacatttgatgttgatgctcgaataaatctttttgagtgcaacataagacttcttggggggcttatttctggtcatattcttgcaaaggagcacagcagtcatcttaaagatggaccatatcaggaccagttactacatcttgctgaaaatttaggaagtcgttttctaccagcttttgagacacctactggattgccatacgcatggatcaatcttaagtatggagtgatggaaaatgaaacaactgagacaagcacatcagggtgtggttctctgattcttgaaatgggtgcattatcacgtttgacgggtgattctagatatgaggctgcagctcttcgtgctcttcgtaagttgtggagcatgagaagttcactaaatcttgtaggcacaacccttgatgtcttgactggcaagtggattgaatattcgtcaggcattggtgctggagttgattcattttatgagtatttgattaaagcgtatgttcttttcggaagcgaagaatactgggatatgtttcattcagcttaccttgcagtgcagaagtatttccgacatggcccatggtatcatgaggctgatatgaggaccggagaagcaacacactggcaactaactagccttcaagccttctggccaggtcttcagacacttctaggagatgttgctgctgcaaatatatcacatcgtgaattttacaatgtatggcaaaggtttggtgttctgccggaaagatatcttttggacttcggaatgttgcatcctacagagaagtattatcctttacgtccagagtttgctgagtctacattttatctttatcaagcaactaaagatccttggtatctagaagttggtgaagctatcattggatcccttaattactatactaaagtggatggaggttttgctagtgtcagggatgtttcgacaatgaaacttgaagatcatcaacatagcttctttctttcagaaacctgcaaatatctttttcttctctacgatgattcattcttgaggaaccaaaattacatatttaccacggagggtcacccccttccaataaggagcacatggcacgagataatcccgacaacgcatgttcccagcaactggacattcgttaaggatgacagccaacccttccgtgtgagcgcattgtcgtctcaagtttgtccagaaacgattttccggcaaagcgttggctccccgtgggagagtgcatgccatgtaccagacgtgttacctacccacagatgcaggaccgatgatgactgtggagtggaggccgtatcatgcaggagaagaacttgcagtatggctggctactgcggcttgtggctgggggtttattag</cdnaseq>

Protein Sequence

<aaseq>MRPPPRPRRPVPARLVAAAVLLSALAGGAAAGAAIAGDGYGRGR RLYMRNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGS ALTLVESLSSLVVLGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGLISGHIL AKEHSSHLKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMENETTETS TSGCGSLILEMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEY SSGIGAGVDSFYEYLIKAYVLFGSEEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEA THWQLTSLQAFWPGLQTLLGDVAAANISHREFYNVWQRFGVLPERYLLDFGMLHPTEK YYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDVSTMKLED HQHSFFLSETCKYLFLLYDDSFLRNQNYIFTTEGHPLPIRSTWHEIIPTTHVPSNWTF VKDDSQPFRVSALSSQVCPETIFRQSVGSPWESACHVPDVLPTHRCRTDDDCGVEAVS CRRRTCSMAGYCGLWLGVY</aaseq>

Gene Sequence

<dnaseqindica>14..177#1098..1140#1241..1306#1402..1463#1620..1719#1819..2001#2482..2530#2618..2797#2923..3043#3141..3222#3312..3397#3540..3640#3775..3916#4017..4167#4239..4466#gcgcgaaaaccccatgcgacctcctccccggccgcgccgcccagtgccggcgcggctcgtcgccgctgcggtcctcctctcggctctcgccgggggagccgcggcgggcgccgccatcgccggcgatgggtacgggcgcggcaggaggctgtacatgaggaacaaggtcctggagatgtgagtgtgctcgacatgccataagctacatgctcagatgctctcttgacttttctctctttcgttgcgcggtcgattggttagatttttttttctttttggttgtggctacatcgcggagaacgaagacatctccgcacttttgttaagcctcgtctccacttgttcgcgaggtctacgataaattcgtcgtaaatttagttgaaaggatgcaaagctttgttcaatgtgttgagacgaatgcccccacttcgaacttaagcctgtaattgtaaagaaggcacgggtttgctatagaaggattgagaatggggtttttgattggataatgtgtgtgtgcccaagttgttaagtattaaaaagtttcatgttataaaacaattatgagaaagttgtcatctcgagttaccaaggattgctttggttggtgtattgtttatctgatgttatctcgagttaccaaggtatttcctgaaccttttatcaacaaatcactgcattaactctgtaaaatagggaaatgctgaaaatctagtctaactttgcatttacaaggcagagtatagttgccctgactgtccaacagggaaaacaaaattgctcctaggagcattggcgttatttatgatgcttaagttattctattatatttggtgtctcaaactgagacggtttgaaccatgcatgcgcctcaccaaagtgttcagcctgaatgctctgcatatgaaggttagcacaaaataatgccagcataaaattttctatccacatacaaaagcatgcgaaggtaggatctcagctcagtatgatcatacattagtattgtggcgctatacttagatcacctaatccaccatttgcacattactgcgtcttgcaatgtttattttctattactgattcactaccattcttttcaggttttaccatgcttatgacaactatatgacttatgcatttccagtatgtccatcagctatcttaagaattctcacacaatgttcagttcgattaaacgcacatgaaatagtacaagctaacattattctctttatcttttcagcatgatgaattgaagcctctaaccaaaagtttcactgactcccttagtgagcttggcaacctaaatgtattaaagtatcaacaagtttgcaaattttaattgaaattttaaaagctttgagatagcaggtcatgatgtcatcactttgttccaacttgtagcttgaacatttgccaaatgattacaatggatctgcacttacactagtcgaatcgttgtcaaggtacagtttatgaagttgtaatgtttttcactactttgaatttggttctgtacttctgtctttgctgttcagaatgtgaatgatgatatagtttcttcagaaaacactattattcgcaaggttgataggtaatgcctctctgtttggctcatgcagtcttgttgtcttaggtaacctcacggagtttgaaagaggagttctctggctttcagagaacctaacatttgatgttgatgctcgaataaatctttttgaggtaatgctagctggttactaccacaggttttcacctaaaaatgacatgttggcctcaggacactgagttacacatgcattttctcttaatcttatgcagtgcaacataagacttcttggggggcttatttctggtcatattcttgcaaaggagcacagcagtcatcttaaagatggaccatatcaggaccagttactacatcttgctgaaaatttaggaagtcgttttctaccagcttttgagacacctactggattgccatacgcatggatcaatcttaaggttcatttacaaatcctctgatcttgctatttcaaaggtggttaatcagggtaggcaatattagaattttaatactggcaaatttcagtttgtatttttacgcaaggctacttgaaaaccatcgtagaagatatcagattgagaaaggaacctttgggttttggaggcaatagctcacagctcagcaaacgaaatgcgtttagtttttactccaatttacagaaggaatatttctagctaaatcagtgatgctcatcatgtacagtattgataataactactttagaagaactaaccaatcaggatgcttcagttcatgccaaaaaacaaatgactgaatgagtacgagtcttgcaaagaacatcagtgtcaagctacaaccacgaaatgttttccacaagtcgtgtattataattttactatattatatgttatcgagagtttcttctaattccatgaccatgtaactattttttccagtatggagtgatggaaaatgaaacaactgagacaagcacatcagggtgtggtgggtgatagaatgttctactgtattccaggggaaatgcattactcttagttatatcttactattttgtaatatacatttttacaggttctctgattcttgaaatgggtgcattatcacgtttgacgggtgattctagatatgaggctgcagctcttcgtgctcttcgtaagttgtggagcatgagaagttcactaaatcttgtaggcacaacccttgatgtcttgactggcaagtggattgaatattcgtcaggcattggtgctggtactactctttacattttcccatgtgatttactgatcatgtgtttgtatcctgcggtaagcatcttgtcactgcacaacatacttttgagacataataatgattcatttgtatcatgtttgcaggagttgattcattttatgagtatttgattaaagcgtatgttcttttcggaagcgaagaatactgggatatgtttcattcagcttaccttgcagtgcagaagtatttccgacatggcccatggtgcacccttttatttttcttggcatttcatctcagctaactggcctgtcactgtgttgtgattgtaccaagcactaatgatcatctggcatgataggtatcatgaggctgatatgaggaccggagaagcaacacactggcaactaactagccttcaagccttctggccaggtcttcaggtttgctgaattccataaattgatggacagtcaccttattgcaggattttaatcatgcattgtttatctactcctgtgatcatgaccagacacttctaggagatgttgctgctgcaaatatatcacatcgtgaattttacaatgtatggcaaaggtttggtgttctgccggaaaggtaccatttactgtttttcccacatattagtaccatcatctttaatggggggaaagacttattatttaagtgataaggcaaaaagttgcttcaagattgatactaaactgtactgacacaagtttcggactgtattttgcagatatcttttggacttcggaatgttgcatcctacagagaagtattatcctttacgtccagagtttgctgagtctacattttatctttatcaagcaactaaaggtttgctcaacaagaaaagccaaaattgcagccattatatctagctagatttcctatacatagaagccattagctcttctccttttctgttccctcattctccttccccaggctgacatatgctcttcctgtagatccttggtatctagaagttggtgaagctatcattggatcccttaattactatactaaagtggatggaggttttgctagtgtcagggatgtttcgacaatgaaacttgaagatcatcaacatagcttctttctttcagaaacgtaagctgttgctcccttccaattatttcttaaaagctggtactaagtatttagtcatcactggtactgacgactgagtcacatgacaaattatttgcagctgcaaatatctttttcttctctacgatgattcattcttgaggaaccaaaattacatatttaccacggagggtcacccccttccaataaggagcacatggcacgagataatcccgacaacgcatgttcccagcaactggacattcgttaaggtaatatcccagtttctgttcccagttcctccttacttgcatgaacaatgataccaaaaacttatcttcaggatgacagccaacccttccgtgtgagcgcattgtcgtctcaagtttgtccagaaacgattttccggcaaagcgttggctccccgtgggagagtgcatgccatgtaccagacgtgttacctacccacagatgcaggaccgatgatgactgtggagtggaggccgtatcatgcaggagaagaacttgcagtatggctggctactgcggcttgtggctgggggtttattagcttttttttttctgtggagattatactgtttcccattctttaaagcacaaaaaagtgaacgttactggacggcctcggcctgttacttctgtacattagaatatatatagctaatcgaacagaatgatagtagcaaagtcgttgtcccagttgttagcgcagaatgaaacatgtatgcaaattctcctaatgtattctttgctgatgtaatcttttgatttattatcaatcttccactccataaatatattaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0741300, RefSeq:Os02g0741300