Os02g0742000

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Revision as of 02:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0742000| Description = Bromo adjacent region domain containing protein| Version = NM_001054621.1 GI:115448612 GeneID:4330691| Length = 6980...")
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Gene Name

Os02g0742000

Description

Bromo adjacent region domain containing protein

Version

NM_001054621.1 GI:115448612 GeneID:4330691

Length

6980 bp

Definition

Oryza sativa Japonica Group Os02g0742000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31950925..31957904

Sequence Coding Region

31951354..31951611,31952576..31952944,31953013..31957401

Expression

GEO Profiles:Os02g0742000

Genome Context

<gbrowseImage1> name=NC_008395:31950925..31957904 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31950925..31957904 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatgggtggcgcgaaggcggcggtgagggttgcggcaagagtcggcgtctcgttcggcacatgtggccagtaactcgcgtagaggcagcagctccaccaccggcacagggacaagcttctcctcctccccgctcctctgttcctccgcccctgacgacctcgtatccacctgcgccgacgactcccccagcagcagcgcacaagaaggagcgtgttgattctccccgtccagcttcatcagattccttcttaaaggacgggcgtgaattccgtgttggcgactgcgctctttttcaggctgttgaagttccccctttcattgggttgatacgttggattgagaaaaaggaggaaggctttcccaagttacgtgtaagttggctgtatagaccagctgacatcaagcttaacaagggaacacagctgtgcgccgcaccaaacgagatcttctattctttccaccaggacgagacatccgctgtctcactgctgcatccttgcaaagttgcttttttgcgtaaaggcgttgagcttccagctggaatttcttcatttgtgtgtcggcgcgtgtatgatattgacaacaagtgtttatggtggcttaccgaccaggattatataaatgagcggcaggaagaagtaaatcggcttctacacagaacaaagctagaaatgcatgcagcagttcagtcaggtgggcgctcaccaaagcggctcaatggaccgtcgtctgcccagcaaaagtctggttctgatggtgcccaaaactgcggtctttccaaagggaagaagagggacaggggtgagcaaggaactgatccagctaagcgagaccgtgagcgtcccctaaaggctgaggatggcgaatcaggcaactttaaggtggagaatctaaagtctgaaattacaaagataacagaaaaaggtggacttccacatgctgaagctgtagagaagctggtacatctcatgcaacttgatcgaactgagcgaaagatagatttgcctggccgggtaattctagctgatattattgcagctacagaaagtcctgactgccttggtaggtttgtgcaactgcgaggccttcctgtgtttgatgattggcttcaagaagctcataaagggaagtctggtgaagctggtagtcctaaagaaactgataagcctatggaagatcttgtcctggccctgcttcgtgcactggcgaaattgcctattaatcttactgctttacaaagttgcagtattgggaagtctgttaatcatctgcgaagccataaaaatccggagatacagaagaaggcaaagtgtcttgtcgaaaattggaagaagcgcgttgatgctgaaatgaagtcaaatgatgtgaaaccagtggtatcaggtcaggctgtatcctggccaggcaaacctgggtttccagaaatttctagtgctggaaacagacgaagtggctcaagtgagtctagtctgaaaagcccagtgtctcagctttcttcatcgaaggccttgacttctaaacctgtagccgccgatgctgctgcgaaatcgagtccagtgatatctggttcttcaaaattgcaacatatgcaaccaggaaatgctgtaaccaacttgaaggagcaaccctccaaatcaactggtggcacttgtggctctgagctgcctgcagtgaaagaggagaaaagcagcagttcaagccagtctctgaacaacagccagtcatgttctagtgaacatgcaaaaacaatcggttcttcgaaggaggatgcccgaagctcaactgcagcttctggtgttgcctataaaacttccggtagttcttctcgtgtgcatcgaagaacaaacaatgggcttcttggttcagggatccagaaagaagctgccgtggcaagatcgtcttcacttgatcactcttcagtgcaggaaaaagtgtcacaatctggcacagcatgtgagaaaggagctgacatacaatcagatcagggtaacagccatagattgattgtccggttcccaaatcctggtcgaagccctgctaggagcgcaagtggcggttcttttgaggacccatcatttactgggagtagagcttcatctcctgtggcagacaaacatgaacaaagtgaccgtagagtgaaaatgaagactgaaaattccaatcctcatttaggcaatgatacaaatgctgagtcttggcacagcaatgatgttaaaggagcttcagtttctgaggaaggcgataaatcacctcgtgctatgttgactgatgacagcaagacaactgaaggagctggcagagatgtacctgtttcacgagttgcttgttcatcatatgcaaatgaaaagggaatctgttcaagtgagactgggctgactaaattgttcaaccctatgaatgctttgattgaaatcaagtactctgaagctagtcattccttgcaagctggggatgatacagcaatgaatcttcttgccagtgtcgctggagaaatatctaaatctgagttgatttcctcatctccttcgcctagaaattcatcagcaaatgaacagggctgtgaaggagacaacattgggaagctaaaagtggaatgtgatgtgagcttgccacagcatgcagggccatcaaatgaagttgagaaagtcatctctgagaagagtgaaaaaagtggtgtaggtttggttggaaaggagctgcaccgggaggatgttaatatgctgtctgtaaacaacttgttgtcacagggtgacaagggcacaacatctgctggatcgtcccctctaccagaaatagattctaaagcgaagactgaaaatcgtgaagtagaggacaccgataaatgttcacatccaccttcacgtggtgatgatggtgtaaagtcaaatgccaaacaacctattggtttcaagattgatacaaactcaaatataaaatcatctactacgagtgaatataggtctgcatttactgttcgaggtaaagttgaagatggttgtacaaccagttctgatgtgggctccacattaggtgatcaatgtaagctggctgtttcaaatagaaaaatgctccctgccgaggaaccattatgtggtggtgacaaacaagctcatggtttgttaaagccaacagatcaaaagcatcttctgggtctaccatattattcagaacacattgataaatctggtgacagtactgcaaataaattgaaattgaagccttcattttcatcatcgactgtggaggtgaataaggctgatggtttgctggttggtagtaacacggtgctgaaagaggatgaaaagaaggaacatccagctgatgttacaaaacttgctgtagcaactggagtcaaacatggtccagaaaatgggattagttctaaagaatcaaaagacaattccagtgaatcaagcagtcacacaagacctggaggcactgtctcacaggaaactgaacatagtgcacaacgcagctcaaagaaatctagcgatgatgcaggtgggaaagacgaccttgtctcatctgatgatggttcttcattctctgccaagaccaggtcaaatgccactgccaagcttgactttgatttgaatgaaggaatacctggagacgaggggcatctgtctgagccagctacctctcctgctgtgtgttcttcagcgattcatttacctcgtccttctccgtttgtatcacctatttcaagtgggctgcctgctccaatagctgctccagctaaaggcccctttgttcctcctgagaacctaataaggttgaagtctgagactggctggaaaggttcagcagccacaagcgcatttcgcccagcggagccaaggaaaatttttgagatgactctcagtgcatctggcattctggtttctgatgctgcagggaaaaaccgcccagcacttgacattgacttaaatgttgcagatgagcaatttcttgaggaagacgtctctcagagttctgttcagacaactggttctgaatctggcaacactagaagaagcaatggtcctgtacgtagtgttggctttgagcttgacttgaatagggccgatgaagttgcagagaatgggcaaattgtgtctaacactaaccacagggttgaagtcccattattatcaagaccattacctggagttttctctagttccgatgcaaatagctcaagggattttgatcttaataatggaccaactcttgatgaagctggtacggaacatgcaccaaggagtctgtcatctaaaaataccagtagcataccattcctacctcaagtcgctagcatgagaatgaacagtgctgaaatgagtaacatatcaccatggtttgcttctgccaatgcttgtgctcctgtagctataaagtcgtttttaccttctagaggagaacagcctcacccagtcgagacagcagctggaagtggaacccagaggatcatcacatcgatggcagatggtgtccaacatggaagtgatcccagccggactccagttatttcaacttcaccgactatgatgtttcaccctcctgcttatcagtatgcaggattcccttttactcctagtgtccaccttcaagcaccggggttttcaattgggtctacatcatatgcgaattctgcacctggaggaattccttatttccctacaattgctccgacgcttgttggcccagcaggtgcattacctgctcagcatactcgacaatatgcaataaacctccctgaaggaagcagcactgttggacatgacaataatcggaaatggggaagacagggtcttgatcttaattctggccctggaagtgtggatgtagaagtgaaggacgatagagtaactttaccagttagacaaaattttattgcgccaccacatgcctttgtggacgagcatacgagaatgtatcaaatgcctccaggtgttggaataaagaggaaggaaccagagggcagttgggatgccgaacgatcttcatacaaacaattgtcatggcaatga</cdnaseq>

Protein Sequence

<aaseq>MHGWREGGGEGCGKSRRLVRHMWPVTRVEAAAPPPAQGQASPPP RSSVPPPLTTSYPPAPTTPPAAAHKKERVDSPRPASSDSFLKDGREFRVGDCALFQAV EVPPFIGLIRWIEKKEEGFPKLRVSWLYRPADIKLNKGTQLCAAPNEIFYSFHQDETS AVSLLHPCKVAFLRKGVELPAGISSFVCRRVYDIDNKCLWWLTDQDYINERQEEVNRL LHRTKLEMHAAVQSGGRSPKRLNGPSSAQQKSGSDGAQNCGLSKGKKRDRGEQGTDPA KRDRERPLKAEDGESGNFKVENLKSEITKITEKGGLPHAEAVEKLVHLMQLDRTERKI DLPGRVILADIIAATESPDCLGRFVQLRGLPVFDDWLQEAHKGKSGEAGSPKETDKPM EDLVLALLRALAKLPINLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDA EMKSNDVKPVVSGQAVSWPGKPGFPEISSAGNRRSGSSESSLKSPVSQLSSSKALTSK PVAADAAAKSSPVISGSSKLQHMQPGNAVTNLKEQPSKSTGGTCGSELPAVKEEKSSS SSQSLNNSQSCSSEHAKTIGSSKEDARSSTAASGVAYKTSGSSSRVHRRTNNGLLGSG IQKEAAVARSSSLDHSSVQEKVSQSGTACEKGADIQSDQGNSHRLIVRFPNPGRSPAR SASGGSFEDPSFTGSRASSPVADKHEQSDRRVKMKTENSNPHLGNDTNAESWHSNDVK GASVSEEGDKSPRAMLTDDSKTTEGAGRDVPVSRVACSSYANEKGICSSETGLTKLFN PMNALIEIKYSEASHSLQAGDDTAMNLLASVAGEISKSELISSSPSPRNSSANEQGCE GDNIGKLKVECDVSLPQHAGPSNEVEKVISEKSEKSGVGLVGKELHREDVNMLSVNNL LSQGDKGTTSAGSSPLPEIDSKAKTENREVEDTDKCSHPPSRGDDGVKSNAKQPIGFK IDTNSNIKSSTTSEYRSAFTVRGKVEDGCTTSSDVGSTLGDQCKLAVSNRKMLPAEEP LCGGDKQAHGLLKPTDQKHLLGLPYYSEHIDKSGDSTANKLKLKPSFSSSTVEVNKAD GLLVGSNTVLKEDEKKEHPADVTKLAVATGVKHGPENGISSKESKDNSSESSSHTRPG GTVSQETEHSAQRSSKKSSDDAGGKDDLVSSDDGSSFSAKTRSNATAKLDFDLNEGIP GDEGHLSEPATSPAVCSSAIHLPRPSPFVSPISSGLPAPIAAPAKGPFVPPENLIRLK SETGWKGSAATSAFRPAEPRKIFEMTLSASGILVSDAAGKNRPALDIDLNVADEQFLE EDVSQSSVQTTGSESGNTRRSNGPVRSVGFELDLNRADEVAENGQIVSNTNHRVEVPL LSRPLPGVFSSSDANSSRDFDLNNGPTLDEAGTEHAPRSLSSKNTSSIPFLPQVASMR MNSAEMSNISPWFASANACAPVAIKSFLPSRGEQPHPVETAAGSGTQRIITSMADGVQ HGSDPSRTPVISTSPTMMFHPPAYQYAGFPFTPSVHLQAPGFSIGSTSYANSAPGGIP YFPTIAPTLVGPAGALPAQHTRQYAINLPEGSSTVGHDNNRKWGRQGLDLNSGPGSVD VEVKDDRVTLPVRQNFIAPPHAFVDEHTRMYQMPPGVGIKRKEPEGSWDAERSSYKQL SWQ</aaseq>

Gene Sequence

<dnaseqindica>430..687#1652..2020#2089..6477#gccgtgctccatataaccatctctctcctcccaaatccgcctctctctcttcccgaatcgcgatttttttctccatttctccaccaccccaccacagatcgagaccaaaccccacgccgggtctcctcctctgacccaatccccgaatccccaaatttgcagttgaaccaccaaactggtggagtcgattcgggcgaattcgagctccgatctgcggttgcgggagaggcgtttcgtccataccggcgcgggcgaggcgaattcgggcgatccgaggcgtatggaggaaggccccgcggatccgctgctcgggagctagggttaagaggcggcggctgcatcggcggggggcgggcgcgatctggtgatggtgcggcgcggcgccgggggacggcgaggagggatcggcggcggggatgatgcaaggctatgcatgggtggcgcgaaggcggcggtgagggttgcggcaagagtcggcgtctcgttcggcacatgtggccagtaactcgcgtagaggcagcagctccaccaccggcacagggacaagcttctcctcctccccgctcctctgttcctccgcccctgacgacctcgtatccacctgcgccgacgactcccccagcagcagcgcacaagaaggagcgtgttgattctccccgtccagcttcatcagattccttcttaaaggtgcctcctctgatgggattcgctttgatgtttacaaagcttgatgagatttatatgaaattgagcatgttgctgtgaccaaatcgcctttgtttttaagcctagataaacttatgtttgtagttacttatatcgttgatggtaacctgtggcatatcagcaaattttcaccgagtaaatatgggatgcatttgatggatgtattgggtgggtcgtgctatcatcaaagtagtttaagatggttttccatgtattatttgattgagtcttttggacagttcaatttgacaatttttggcacccctacataagatttgtgtgaaggcgtgttcttgcttgtgtgcatctcaaaagccattcgaacaattcatttgtctattttttaggagtagcatttcttggataatcactgggcatgatatatccaaagaatatatggctaaggggtgcatgtggcattatttttggatccgtgtgcagcccatgatgtaacttacggtttattaccatctatctctacatcttctaatacttgtttcattaatgtattgtataaaaacaagataataataataataataattattcttttcaaagttagaaataagataaaaacaaccggaatatcacaattaagcctgggtgcaagtattggcgtagacagctcgcattgaattatgtaaccatcaactttacatgatctttactttcagatcgaacaaattcaatggcatggcaactattgctatttctgttgcaatttgatttttagtgtgtattgtatgtttcaacaacaccatgataccattttcttctttcttctttctttatacaagtatgcttatatttcttctatgccaacatgcatttttcagtgttttcatatgcccaatgttattttggtggatacatgaattgtgttttgtcccttgtacacatgataatttttttattgaatatccaggacgggcgtgaattccgtgttggcgactgcgctctttttcaggctgttgaagttccccctttcattgggttgatacgttggattgagaaaaaggaggaaggctttcccaagttacgtgtaagttggctgtatagaccagctgacatcaagcttaacaagggaacacagctgtgcgccgcaccaaacgagatcttctattctttccaccaggacgagacatccgctgtctcactgctgcatccttgcaaagttgcttttttgcgtaaaggcgttgagcttccagctggaatttcttcatttgtgtgtcggcgcgtgtatgatattgacaacaagtgtttatggtggcttaccgaccaggattatataaatgtaagttctacagttaccttcctttattagaatcgttttctgtgctaaggtgttcaactcatgaccaggagcggcaggaagaagtaaatcggcttctacacagaacaaagctagaaatgcatgcagcagttcagtcaggtgggcgctcaccaaagcggctcaatggaccgtcgtctgcccagcaaaagtctggttctgatggtgcccaaaactgcggtctttccaaagggaagaagagggacaggggtgagcaaggaactgatccagctaagcgagaccgtgagcgtcccctaaaggctgaggatggcgaatcaggcaactttaaggtggagaatctaaagtctgaaattacaaagataacagaaaaaggtggacttccacatgctgaagctgtagagaagctggtacatctcatgcaacttgatcgaactgagcgaaagatagatttgcctggccgggtaattctagctgatattattgcagctacagaaagtcctgactgccttggtaggtttgtgcaactgcgaggccttcctgtgtttgatgattggcttcaagaagctcataaagggaagtctggtgaagctggtagtcctaaagaaactgataagcctatggaagatcttgtcctggccctgcttcgtgcactggcgaaattgcctattaatcttactgctttacaaagttgcagtattgggaagtctgttaatcatctgcgaagccataaaaatccggagatacagaagaaggcaaagtgtcttgtcgaaaattggaagaagcgcgttgatgctgaaatgaagtcaaatgatgtgaaaccagtggtatcaggtcaggctgtatcctggccaggcaaacctgggtttccagaaatttctagtgctggaaacagacgaagtggctcaagtgagtctagtctgaaaagcccagtgtctcagctttcttcatcgaaggccttgacttctaaacctgtagccgccgatgctgctgcgaaatcgagtccagtgatatctggttcttcaaaattgcaacatatgcaaccaggaaatgctgtaaccaacttgaaggagcaaccctccaaatcaactggtggcacttgtggctctgagctgcctgcagtgaaagaggagaaaagcagcagttcaagccagtctctgaacaacagccagtcatgttctagtgaacatgcaaaaacaatcggttcttcgaaggaggatgcccgaagctcaactgcagcttctggtgttgcctataaaacttccggtagttcttctcgtgtgcatcgaagaacaaacaatgggcttcttggttcagggatccagaaagaagctgccgtggcaagatcgtcttcacttgatcactcttcagtgcaggaaaaagtgtcacaatctggcacagcatgtgagaaaggagctgacatacaatcagatcagggtaacagccatagattgattgtccggttcccaaatcctggtcgaagccctgctaggagcgcaagtggcggttcttttgaggacccatcatttactgggagtagagcttcatctcctgtggcagacaaacatgaacaaagtgaccgtagagtgaaaatgaagactgaaaattccaatcctcatttaggcaatgatacaaatgctgagtcttggcacagcaatgatgttaaaggagcttcagtttctgaggaaggcgataaatcacctcgtgctatgttgactgatgacagcaagacaactgaaggagctggcagagatgtacctgtttcacgagttgcttgttcatcatatgcaaatgaaaagggaatctgttcaagtgagactgggctgactaaattgttcaaccctatgaatgctttgattgaaatcaagtactctgaagctagtcattccttgcaagctggggatgatacagcaatgaatcttcttgccagtgtcgctggagaaatatctaaatctgagttgatttcctcatctccttcgcctagaaattcatcagcaaatgaacagggctgtgaaggagacaacattgggaagctaaaagtggaatgtgatgtgagcttgccacagcatgcagggccatcaaatgaagttgagaaagtcatctctgagaagagtgaaaaaagtggtgtaggtttggttggaaaggagctgcaccgggaggatgttaatatgctgtctgtaaacaacttgttgtcacagggtgacaagggcacaacatctgctggatcgtcccctctaccagaaatagattctaaagcgaagactgaaaatcgtgaagtagaggacaccgataaatgttcacatccaccttcacgtggtgatgatggtgtaaagtcaaatgccaaacaacctattggtttcaagattgatacaaactcaaatataaaatcatctactacgagtgaatataggtctgcatttactgttcgaggtaaagttgaagatggttgtacaaccagttctgatgtgggctccacattaggtgatcaatgtaagctggctgtttcaaatagaaaaatgctccctgccgaggaaccattatgtggtggtgacaaacaagctcatggtttgttaaagccaacagatcaaaagcatcttctgggtctaccatattattcagaacacattgataaatctggtgacagtactgcaaataaattgaaattgaagccttcattttcatcatcgactgtggaggtgaataaggctgatggtttgctggttggtagtaacacggtgctgaaagaggatgaaaagaaggaacatccagctgatgttacaaaacttgctgtagcaactggagtcaaacatggtccagaaaatgggattagttctaaagaatcaaaagacaattccagtgaatcaagcagtcacacaagacctggaggcactgtctcacaggaaactgaacatagtgcacaacgcagctcaaagaaatctagcgatgatgcaggtgggaaagacgaccttgtctcatctgatgatggttcttcattctctgccaagaccaggtcaaatgccactgccaagcttgactttgatttgaatgaaggaatacctggagacgaggggcatctgtctgagccagctacctctcctgctgtgtgttcttcagcgattcatttacctcgtccttctccgtttgtatcacctatttcaagtgggctgcctgctccaatagctgctccagctaaaggcccctttgttcctcctgagaacctaataaggttgaagtctgagactggctggaaaggttcagcagccacaagcgcatttcgcccagcggagccaaggaaaatttttgagatgactctcagtgcatctggcattctggtttctgatgctgcagggaaaaaccgcccagcacttgacattgacttaaatgttgcagatgagcaatttcttgaggaagacgtctctcagagttctgttcagacaactggttctgaatctggcaacactagaagaagcaatggtcctgtacgtagtgttggctttgagcttgacttgaatagggccgatgaagttgcagagaatgggcaaattgtgtctaacactaaccacagggttgaagtcccattattatcaagaccattacctggagttttctctagttccgatgcaaatagctcaagggattttgatcttaataatggaccaactcttgatgaagctggtacggaacatgcaccaaggagtctgtcatctaaaaataccagtagcataccattcctacctcaagtcgctagcatgagaatgaacagtgctgaaatgagtaacatatcaccatggtttgcttctgccaatgcttgtgctcctgtagctataaagtcgtttttaccttctagaggagaacagcctcacccagtcgagacagcagctggaagtggaacccagaggatcatcacatcgatggcagatggtgtccaacatggaagtgatcccagccggactccagttatttcaacttcaccgactatgatgtttcaccctcctgcttatcagtatgcaggattcccttttactcctagtgtccaccttcaagcaccggggttttcaattgggtctacatcatatgcgaattctgcacctggaggaattccttatttccctacaattgctccgacgcttgttggcccagcaggtgcattacctgctcagcatactcgacaatatgcaataaacctccctgaaggaagcagcactgttggacatgacaataatcggaaatggggaagacagggtcttgatcttaattctggccctggaagtgtggatgtagaagtgaaggacgatagagtaactttaccagttagacaaaattttattgcgccaccacatgcctttgtggacgagcatacgagaatgtatcaaatgcctccaggtgttggaataaagaggaaggaaccagagggcagttgggatgccgaacgatcttcatacaaacaattgtcatggcaatgagcttttgctggtatcatttctcagcgacttcggcatccaatgagcttgtatgtgcttgcttctcgccttaaacgacctgctttgtttatcacctgcagctctttttcttttgatattaaggtgctgtgttttcatttgcagaggcagctgcatgtggtacttgggttcgtgtactgcacccttgctggaatatacaattcatacatggatactttccttgtgatgatgtgaatgtgagaggaacgatgctttgatgtaattgctgtaaatgttcatatttcatactttcctggaaacaattttccttggcattggcagttgctttgctagattttcttagctgtcagggactcaggcatgcttctaatttgcttgggagggtatgactggagatggaaacggtataggtcctgggcctcaagaaacatctgaagccgctgtaattaggttcagtttgtttgtttttagtttcttatgacagaccaattttctctttttggagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0742000, RefSeq:Os02g0742000