Os10g0444100

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0444100| Description = Homeodomain-like containing protein| Version = NM_001071240.1 GI:115482223 GeneID:4348738| Length = 3197 bp| Defini...")
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Gene Name

Os10g0444100

Description

Homeodomain-like containing protein

Version

NM_001071240.1 GI:115482223 GeneID:4348738

Length

3197 bp

Definition

Oryza sativa Japonica Group Os10g0444100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16454831..16458027

Sequence Coding Region

16455232..16455441,16456586..16456682,16456758..16456832,16456915..16457015,16457239..16457421
,16457521..16457577,16457663..16457764

Expression

GEO Profiles:Os10g0444100

Genome Context

<gbrowseImage1> name=NC_008403:16454831..16458027 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16454831..16458027 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggcggtagcggcggcttgtggatggaggaagggtttggaggagggagagccggagtgggaagcgatggagctggaggcggcggcgccggcgatctttccggcggacggtggcggcggcggcgtcaggaggagtccggcggcgtcgacgatcttcttgccagatcttctagacgggagctttctttctgacgatgatctaagccagatggaggatatatttcaaccagcacatgaggatgacatccaccatttgttacaagggccccaagatgaagcagacctggacaaatggttagcaggtcaatcttgttcacccgcagcggaaggctccataacagtccaaacacctacatatcccatactaaatcttatagatttcataccaaaggacggttgtaaacgtggcccacgaggtgctcgcaagagacagacatttccatcacgaggtgctcgcacgagacgggcttttccattgcaacaactatgctttggaaccactagagacaaaagatgtcgtctaagaaaaaataatgatcactggacaatcaaagaagtaaaaaatttggtacaaggtgtttccaagcatggggttggacgatggacagaattgaagagagattttttctccacatccattcgaacttctgtccatctgaaggataaatggaggaacctgttgaaagcatgtgggatcgatttcacctccacagcaaagggaaaagcacagaagacaatgctatggccccttgataaacgattgactgaacagattatacagttagcatataaacacccttacccaagacaaaagtactag</cdnaseq>

Protein Sequence

<aaseq>MEKAVAAACGWRKGLEEGEPEWEAMELEAAAPAIFPADGGGGGV RRSPAASTIFLPDLLDGSFLSDDDLSQMEDIFQPAHEDDIHHLLQGPQDEADLDKWLA GQSCSPAAEGSITVQTPTYPILNLIDFIPKDGCKRGPRGARKRQTFPSRGARTRRAFP LQQLCFGTTRDKRCRLRKNNDHWTIKEVKNLVQGVSKHGVGRWTELKRDFFSTSIRTS VHLKDKWRNLLKACGIDFTSTAKGKAQKTMLWPLDKRLTEQIIQLAYKHPYPRQKY</aaseq>

Gene Sequence

<dnaseqindica>402..611#1756..1852#1928..2002#2085..2185#2409..2591#2691..2747#2833..2934#ctctttctctctcgtcttcttcgcctccctccctccgccgcgcctccccatcccctccgccgccgccgctctccgctcttccggtctcctcggcgatctgcgcggccaatcgcacaggcggggcgcgcgcgcggtgaaggatcgctccagtgaggtgaggtgaggtgattgttgtgtttctttcttcctgctttctttcttttatggtttctacctggttttgctcatctcgtttctactcgtggagagaggtggagaagatttgggtttttctgcttcggaatgatgaatgtgggctgttcttgttatcccggtgaaaaaaaaaaagctgcgtttttattcagttcagctttctttttcttttctttcgcagtgcaggggagctctgcatcagctgggccatggagaaggcggtagcggcggcttgtggatggaggaagggtttggaggagggagagccggagtgggaagcgatggagctggaggcggcggcgccggcgatctttccggcggacggtggcggcggcggcgtcaggaggagtccggcggcgtcgacgatcttcttgccagatcttctagacgggagctttctttctgacgatgatctaagccaggcaagagccccctttttctgcttcgcttgatcttgttttgttttcttggcagtaaaacgctgtggtggatgttgcaaaaagtttttgtcttgatatctctgtagtacaaatgtttgtgtgtttttttagtgaaagaagcaattggaacatatatatctatgttctgctcagatgttgaagcaatttgttggtttgttgaaatgggtagtctttcaagaatgaactggaaatatttcgtgtgtatatgatgatgatgatgatgtagttacagtattgcactgattacttagtacagtacatgtgtcgccctttgtgattttgaaggctgaatccttcactatgctactccataagagcatcttcctatggagtatttcctgtcatctgttttgtacttcttgtccccctttgtaatcttgaaggctatgtacatccgcttgaatatagatgccggaattttttttaattcattatctaaaagaagtaggagcctcttcaatacttcttgtcatttgttttgtacttcttgtccccctttgtgattttaaaggctatctacatccgcttgaatgtagacgctggaatttttttaattcattatttaaaaaaagtaggagcatcttccaaaaatgcatttttcatggatgtacttgttaccgccttatgtgtactatatgctttatagataggggagatgcttaaactagactagggccttgttcggttaattcctcccacaagaggattgagaaggatttggatgtgtggtgtggaattcatcccctcaattccttccttctttgggattaaccgagcaaggttgtaggaagccaattgttcatcacaaatattaatcatgacaatgatttcacaaaggttaaaggggttcacagtcacaaccccacctctaaaattgaaattacacaatctatgtcttattagggtgatcaagaagtaagttatcaggtatttggtggtatttgaagcacactttgcctgagccctgggatgaaccatttttttctttgctttattgcattttttatgcaccattatttgatacatccatttgattttgtgtacacatctcagatatacatataaaaaataagtttcagtaccttgtttaatttcttcattgcagatggaggatatatttcaaccagcacatgaggatgacatccaccatttgttacaagggccccaagatgaagcagacctggacaaatggttagcaggtaaaatgtttaggaactattgtctattttcagtcttttaacatgctcatcacatctgtagaactctattagcaggtcaatcttgttcacccgcagcggaaggctccataacagtccaaacacctacatatcccatactaaatcttataggtatgaataatgaggtctctccactaatataaatcagtatacaattagtcatgaacttattgaaacatattgattgctttagatttcataccaaaggacggttgtaaacgtggcccacgaggtgctcgcaagagacagacatttccatcacgaggtgctcgcacgagacgggcttttccattggtaagaaagtggacacattcctttagagaggaaagtcagtgcttcctgtgctataattctatgaaaaagttatattttttaggcatagacatgtactttgttcacagagttccattgctgaagttcaatgctttatattgtaccctctttaagttcagattttcgatatgctattatccatcaatggacaatatcttctataattatttttttcccttcacagcaacaactatgctttggaaccactagagacaaaagatgtcgtctaagaaaaaataatgatcactggacaatcaaagaagtaaaaaatttggtacaaggtgtttccaagcatggggttggacgatggacagaattgaagagagattttttctccacatccattcgaacttctgtccatctgaaggtctaatgctttgttgctttgtgatatattgcacgcaaaataacttcattgttagatggtgctagtcaaatattattctcatgatgtctcctgatccaggataaatggaggaacctgttgaaagcatgtgggatcgatttcacctccacagcaaaggtaattctatgctacatttcttgaatgtatccgttatggcggcactgtgaattccattctctcacatttctcaaacttgcactagggaaaagcacagaagacaatgctatggccccttgataaacgattgactgaacagattatacagttagcatataaacacccttacccaagacaaaagtactagaatagttactggttgttctagcagagaaagcaactggtagaagagtcagaaggtatcagagcatatagtagagttgattttagtcaggaccatcagtagatttatctcctccttaactagtagctactgaaatttaaacgtttttttgtcgttttggttacaatttcctctccacatttgggattttgtaattggattgtaaatactgtcttattgacaaattggagggggttcagtctccaggatcttacttggttttactg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0444100, RefSeq:Os10g0444100