Os02g0743700

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Revision as of 02:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0743700| Description = Similar to RING-H2 finger protein ATL1Q| Version = NM_001054632.1 GI:115448634 GeneID:4330702| Length = 4273 bp| De...")
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Gene Name

Os02g0743700

Description

Similar to RING-H2 finger protein ATL1Q

Version

NM_001054632.1 GI:115448634 GeneID:4330702

Length

4273 bp

Definition

Oryza sativa Japonica Group Os02g0743700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32077828..32082100

Sequence Coding Region

32077887..32077998,32078175..32078353,32078619..32078702,32078994..32079158,32079886..32080008

Expression

GEO Profiles:Os02g0743700

Genome Context

<gbrowseImage1> name=NC_008395:32077828..32082100 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32077828..32082100 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtcgcggccgcggaggacgcgctggaggagagcggcgtggcggtgtacctccccaggcttctcgccggcgtcatctccggcgctctcaccggcctcttcgctctcgctggggccttgaccggagcggtgaccggcgcgctggccggaagggcttcagacagcggcgtgctccggggagctggattgggggcgttcgccggagctgtgctctccattgaggtcctcgaggcttctcgtgcttattggtgctcggaccggctgggctctcatggcacatcctccatggcagatttcatagagcagctcctccaagcgcggtttgtgcaagagcaaattgtaccttcaggatatgcaacgcatcgttggcaggtcagcatttcagattttggtcatgatgatctgtatgatatttttggagattgttcatccaaagggctttcacgggagtcactgaataaattaccacactatgtggtcactgaccaaacacggaactcgtttggtgaagacctctcttgcactatctgcctgcaggatattgtaaccggtgaaacggcgaggagattgccgaattgctcccacactttccaccagccttgcgtggacaaatggctcgttggccatgggtcttgccctgtatgtaggcaatgtgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MEVAAAEDALEESGVAVYLPRLLAGVISGALTGLFALAGALTGA VTGALAGRASDSGVLRGAGLGAFAGAVLSIEVLEASRAYWCSDRLGSHGTSSMADFIE QLLQARFVQEQIVPSGYATHRWQVSISDFGHDDLYDIFGDCSSKGLSRESLNKLPHYV VTDQTRNSFGEDLSCTICLQDIVTGETARRLPNCSHTFHQPCVDKWLVGHGSCPVCRQ CV</aaseq>

Gene Sequence

<dnaseqindica>60..171#348..526#792..875#1167..1331#2059..2181#gcacgcggcataccaagaaaccgcgcggcgcgcgcttcccgggggggcgcctgccttcgatggaggtcgcggccgcggaggacgcgctggaggagagcggcgtggcggtgtacctccccaggcttctcgccggcgtcatctccggcgctctcaccggcctcttcgctctcggtactcaccaaaacacccgccccttctttccccccttgctcgagctgttcatgtgattctttgacgccagcgacagcgagcattgcccgtgagagctcgttctttgctggcctcgcgtcgcgtacgtgttccgatttttttttatgtccgttgtttgatgtggtgctttgtaaaagctggggccttgaccggagcggtgaccggcgcgctggccggaagggcttcagacagcggcgtgctccggggagctggattgggggcgttcgccggagctgtgctctccattgaggtcctcgaggcttctcgtgcttattggtgctcggaccggctgggctctcatggcacatcctccatggtcagtaagcttcttccatacttgcatatttgtttgtccaagaagttatattaatgcgtttgacttcagatgatgtgacctgaagtatttgacgaatttatttctctgaaagatatatgctcattagcctgatgtaacttcttccaatatgctgtgccgtttactttactcctcgacggcttgacaccatgattttgaaatgtatctctcgtctgtgtttgtaagatacgcctctaagaaaaattcataacgatttggtgttcaggcagatttcatagagcagctcctccaagcgcggtttgtgcaagagcaaattgtaccttcaggatatgcaacgcatcgttggcaggtcagttacatgttctgctgatgcaattttgtttgccatggttctcattttataaaatgtttttttatgtgaaaaacctgatctgctggccatcatttcattattctatttgcaaaattggtagttttaaaccactttatttagttgagacaacggtacaaatttattggctagtaggcccgggtactttggaaacgatgttcggttcgcagaatcaccgtttattggaacacatcgttatttattgaagcattttcttttactgattttttttatgttctttgtcaacaggtcagcatttcagattttggtcatgatgatctgtatgatatttttggagattgttcatccaaagggctttcacgggagtcactgaataaattaccacactatgtggtcactgaccaaacacggaactcgtttggtgaagacctctcttgcactatctgcctgcaggtacatttatcaaaattagctttatgttgtcgacaaacctgcctggctgccttgcacaattttgcacatggtttaggttcaacaacgataataaaagcaaaacaacatccatttcatgattgcagacaatatagtgaatgtttagttagcatatttgagctttctcctttttggcaaagtttgttaagaaaatcaagatcaccagtgatttgaaaattggtgatagcataccactacaagtctccatctggttgttagtgatggctgatcacatatagtagtaactgttctaaacataattgccaagggggtaaatgggaagacatcttcaaattattcatgaaattcttttgaccttcttcatagaacgttttaaacctaactcgtcctgaccattgaatacggtctattacttgatcaatgatttccaaccagaaaccaaagcttttcccgaccttgttgaaccaggaaatgcggcccattttttagattgataaatgaaacattcaagtacatatatatagctggatagtagatatgacatgattgttatggtgtgatatgtagagcagggagatgcaacgacctccgtttttatgttccccttttgtggcaacttgcataccaaattatgcctgctactaaatgcaatgtggttaggatttgctttgcaacttgctcactccctacacacactcaatgtcactgcttaattaccgctttgcaggatattgtaaccggtgaaacggcgaggagattgccgaattgctcccacactttccaccagccttgcgtggacaaatggctcgttggccatgggtcttgccctgtatgtaggcaatgtgtgtaacaacagaaggtaaaaaaaaccctgcattctgcaggctctccatcttattagaagagactagttgtgcaaatgtttgctcttgatagcacccaccacagagttaattatacacagtagctttgtaatttactgtactactagataggcgtatcttttaccagcgtaaacagaggctgtaaatcagaggatttgacactgtttcttacgctgagtttcaatgtaaaatggaataaaggtttctctgtcgcggagctcttcaaggccctggacctggagaatatgctaaggccatactaggaaatggctacatagtcagccgtttttacttgctgttgtacagtgtacggtgtatacaaatgtgatggttttttttagaatatcgattaattatagcccgtgcatgtgggaagcccagcaactccaagatcgtgtagtgatggccgcattgataatctgatagggcttccaaagattaggcaggacccgttgtcgtggtcgccatgcctccctgttgtgcccattcctcattcccatccaagcaactatgcaaaggcatcaacagatcaacttacggcggttcatcagtccatggcaacgttcaatcgcccggccatgctgccgatgtcccttgcagaatagctgtatcatgatatcatcagctgcatcactgttcctacgtagtgctgcggctgtgcctcctccgcctgtgcgcgtccgtttcgctcgccactgtttggctatggggaggagaaagagaaaccggggcagtgcgcgtacgagaaagttgattgggttcctgatgttgatggaggcggcagcatcctagtacagcgtcgcatctcatcagagagtaggcgagcagcagccgccaactgctggatggtcgtagtcgcggctcagaatctttgcccaccttggcgctgctgatgttagtccccctgtcacccgccaccaacaatccgcccagataggctgccctcagggctcgcaggccagcataccaattccggccgcattcagtacaaataagaactactcgtagcctactactactatagtactacaacgtactgcagaatacaggataaaagattccccagaaacaagagcaaaaaccaaagagagaggaactgcatttgctttgtagatgccgatatccatttgcacaaccaccagagcttagagcacaaaatctcgaccatgttactgctgagtagatacaggataaggtgtttaagaggaaggtttctgaataggtgcagcttcatgtttatagactaacattgtgtgactaccaggctatgattcgaggattactagttaccatagagctaaatcgtactagcagagaagtcttcagtatttgagcttcctaacccggtacaaaaaagatgatgtgaccttctgttctgtgtctgaacttctattctctgtcaaaggatgatgtatgtacacttcttgggttcaacatcctcaatttttgccttaggaatccatatgcgagtactgcaagaaatagctgcatcagatacattgaagcaccaacaaacaaacggtggcaaagtacaaacagaactacaggattcagaaaatgagaggttaaagaaaaagggaggaaaggtagcagaaagcctgaaactcgcctgggcattcttcagaagttcctcttgctggatatcatcacttgttgcaggatccatagctctctgatgaatcaatcagaaatgtgaagacaaattagtaaacttgatcagtggtaactgaatcgattgtgcatgaaggggcagaaattcattgccttgggcaatccatgacttagtatcctcacaatagtctctttggcctcaacatcacaatcacggagttcaggtactttcatgtcgcgggggtcaagttcagggtcaccttttatcactgatgtccaccattccttctggttttcctttgtcaaaagtatagacagtgtattcccatcctctgaaggaattatcacaaaataatgcatgtcaagtcagtaacaagagtcatgtaggtattgctatcgatgagaaatgtaacaagtatcatcaaactatgtatgtaccaatggtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0743700, RefSeq:Os02g0743700