Os02g0744200

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Revision as of 02:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0744200| Description = Alpha-expansin OsEXPA5| Version = NM_001054636.1 GI:115448642 GeneID:4330706| Length = 1605 bp| Definition = Oryza ...")
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Gene Name

Os02g0744200

Description

Alpha-expansin OsEXPA5

Version

NM_001054636.1 GI:115448642 GeneID:4330706

Length

1605 bp

Definition

Oryza sativa Japonica Group Os02g0744200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32107429..32109033

Sequence Coding Region

32107507..32107750,32107845..32108166,32108263..32108572

Expression

GEO Profiles:Os02g0744200

Genome Context

<gbrowseImage1> name=NC_008395:32107429..32109033 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32107429..32109033 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcccgccgagacgtcctcgctgttgtcctcgtggccgcgctgctcccgccggcgttgtcccgtgggctttggctggggcaccacgggctggggcacgggcacgggcgatggcgcgcgccgcatgtcggcggacacggccagggacaggggccgcagcagcacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggtgacgcgtcgggcaccatgggaggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcattgtccccgtctcctaccgccgggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga</cdnaseq>

Protein Sequence

<aaseq>MSSRRDVLAVVLVAALLPPALSRGLWLGHHGLGHGHGRWRAPHV GGHGQGQGPQQHAPLGGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL STALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNP PRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGG AGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVP RGWSFGQTFSGAQFN</aaseq>

Gene Sequence

<dnaseqindica>79..322#417..738#835..1144#actccacactccacgcctccgcccgctctcgtcgcagcgcaccccgtcgcgtgcgacgactccatccccgtcacaacaatgtcgtcccgccgagacgtcctcgctgttgtcctcgtggccgcgctgctcccgccggcgttgtcccgtgggctttggctggggcaccacgggctggggcacgggcacgggcgatggcgcgcgccgcatgtcggcggacacggccagggacaggggccgcagcagcacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggtgacgcgtcgggcaccatgggtacgtttttttctcgctgtgcactgtgctgaaatgttgttacatctgcgtgttgtgctcactgttttgcgtgtgcgtttttggtcgcgtgcaggaggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcattgtccccgtctcctaccgccggtgagtagccaacgccggcaatttcttgccttcgcgtttcgctttcttggatctaccggaacttactgaccatggcgtgcgtgctctcgagtgcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactgattccgctcaattttactcgagcatcgtcgtggtagttgcagtagtactcccaactggaccgtgctgggaagtgccattgttttatgattggtactcagtctcgccttggttcttgggaaagtatttagtgggtagtttggcctagtatcaacatgggctttgtgctggtgtcactgctagtggtagtttgttacaagtaccattagttgagcttttgtggtatcttttggctagggattggaagtggtggtaaggctgtggcttgattgacagaggccgccttgtatcacccgccaaaatagcaaaattgggcctaatgggaatggccttctgctagtaatggttttgcctggttgttgtctgtaccggaccccagtaccggacctcattttgggggtgccaaacagtttaggcatctggggtatgccctgtgtgctgcttatgaacaatttctttttact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0744200, RefSeq:Os02g0744200