Os02g0751100

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Revision as of 02:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0751100| Description = Peptidase A1, pepsin family protein| Version = NM_001054669.1 GI:115448708 GeneID:4330744| Length = 5603 bp| Defini...")
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Gene Name

Os02g0751100

Description

Peptidase A1, pepsin family protein

Version

NM_001054669.1 GI:115448708 GeneID:4330744

Length

5603 bp

Definition

Oryza sativa Japonica Group Os02g0751100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32451675..32457277

Sequence Coding Region

32451817..32452115,32452463..32452598,32453988..32454220,32454849..32455076,32455241..32455379
,32455459..32455529,32455681..32455780,32456569..32456632,32456714..32456785
,32456868..32457088

Expression

GEO Profiles:Os02g0751100

Genome Context

<gbrowseImage1> name=NC_008395:32451675..32457277 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32451675..32457277 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcctcccggtgctactcccgctgctgctgctgctgctcgccgcggcagcggcggtggcggcggcggaagcggcgacgctttcggcgaggatggtgcaccggctgtccgacgaggctcggctcgcggcgggcgcgcgtggggggcggcgctggccccgtcgcgggagcggggattacttccgcgcgctggtgcggagcgacctccagcggcagaagcggcgggtcggcggcaagtaccagctcctctccctctcccagggcggcagtatcttcccctccggcaacgacttgggctggttatactacacttgggtggacgttgggacgccaaatacttccttcctggtcgcattggatactggaagtgacttgttttgggtgccttgtgattgtatccaatgtgcgccattgtccagctaccatggaagtttggatagagatcttgggatttacaagccatctgaatcaactacaagtcggcatctgccctgtagccatgagctttgctcaccggcttcaggttgcacaaacccgaagcagccttgtccatacaatattgactacttttcagaaaatacaaccagctccggtttgctaattgaggatatgttacacttggattctagggagggccatgcacctgtgaatgcttctgtcattataggctgtggtaaaaagcagagtggtagctatttggaaggtattgcaccagatggacttcttggtcttggaatggcagatatctcagtacctagtttccttgcaagagctggattagtacgaaattccttttcaatgtgtttcaagaaagatgattctgggagaattttctttggtgatcaaggagtacctacccaacagtctacaccatttgtcccgatgaatggcaagcttcagacttatgctgttaatgttgacaaatattgtattggacataagtgtacggagggagctggcttccaggcattagtagacactggaacatccttcaccagtcttcccctcgatgcctacaagagtatcactatggagttcgacaaacaaatcaatgcatcaagagcatcttctgatgattattctttcgaatattgctacagcaccggtcctcttgagatgcctgatgttccaactataactctgacttttgctgagaacaagagtttccaggctgttaatcctatacttccatttaatgacagacagggagaatttgctgtcttttgcttagcagtactaccatcacctgaacctgttgggattattgggcagaatttcatggttggctatcacgtagtttttgacagagaaaatatgaagctgggctggtaccgctctgaatgccatgatcttgacaacagcacgacggtgtccttaggtccatcacagcataacagtccagaggaccccctaccgtcaaacgagcagcagacctctccggctgtcacgccggctgtcgcaggcagggctccgtcctctggcggatcgacgactctgcagaacctacttgctaactctaacatgctgctcttactgactatgtccgtgttcttcatctcatga</cdnaseq>

Protein Sequence

<aaseq>MRLPVLLPLLLLLLAAAAAVAAAEAATLSARMVHRLSDEARLAA GARGGRRWPRRGSGDYFRALVRSDLQRQKRRVGGKYQLLSLSQGGSIFPSGNDLGWLY YTWVDVGTPNTSFLVALDTGSDLFWVPCDCIQCAPLSSYHGSLDRDLGIYKPSESTTS RHLPCSHELCSPASGCTNPKQPCPYNIDYFSENTTSSGLLIEDMLHLDSREGHAPVNA SVIIGCGKKQSGSYLEGIAPDGLLGLGMADISVPSFLARAGLVRNSFSMCFKKDDSGR IFFGDQGVPTQQSTPFVPMNGKLQTYAVNVDKYCIGHKCTEGAGFQALVDTGTSFTSL PLDAYKSITMEFDKQINASRASSDDYSFEYCYSTGPLEMPDVPTITLTFAENKSFQAV NPILPFNDRQGEFAVFCLAVLPSPEPVGIIGQNFMVGYHVVFDRENMKLGWYRSECHD LDNSTTVSLGPSQHNSPEDPLPSNEQQTSPAVTPAVAGRAPSSGGSTTLQNLLANSNM LLLLTMSVFFIS</aaseq>

Gene Sequence

<dnaseqindica>143..441#789..924#2314..2546#3175..3402#3567..3705#3785..3855#4007..4106#4895..4958#5040..5111#5194..5414#gctctcactcccacccgctcgaccaccaccaccgcctcctcctcctcacctcgcaccccgcaaaacctagccccaggtcctctcctcccctccgccttgccgcattacccccagatccaccgcctccggcccagatccacccatgcgcctcccggtgctactcccgctgctgctgctgctgctcgccgcggcagcggcggtggcggcggcggaagcggcgacgctttcggcgaggatggtgcaccggctgtccgacgaggctcggctcgcggcgggcgcgcgtggggggcggcgctggccccgtcgcgggagcggggattacttccgcgcgctggtgcggagcgacctccagcggcagaagcggcgggtcggcggcaagtaccagctcctctccctctcccagggcggcagtatcttcccctccggcaacgacttgggctggtgagctacacttcctgcctgggctacggtctcgcccctctagcccccttcggatcttactgcatttcttcctcagcatttttaatcttctgttgtactgtagatgcagtagcatctcttcgcaagttcacatgctgtagtagttcagttacttcagtagtgctataggacagccgatatagaacaatgcgctactattttatcacaaacttttgtagtatttctcgttgtgtagtatgggttacattgtgaatttgtgatgggccaagcagccttgtgcagagtcagtcgtgcttaggttgcgctctgagttgtggagtttcttctgtctttggatggatgtgcaggttatactacacttgggtggacgttgggacgccaaatacttccttcctggtcgcattggatactggaagtgacttgttttgggtgccttgtgattgtatccaatgtgcgccattgtccagctaccatggaagtttggtatgcatctctttgtgatcagtaacgtcatgttaaggatataccgatgctctatatggggatgttcgtggcaatgttaacagattatcaaatttgtttcctaagaaattatttcttcgcggagggtctgtttagattggtgtcattttaaaccataccattattcggtaaaattaacaatcatatgtctgcatttagttttctaccaaacattggtaatatctagagaattttggcaatatcacatttaatccatataaaaaacttggcaatgttgtcaacttgctaaaattttggtattgtcaaattttagaatggtttattttggcagcaagctgaacatgcctggaatatacaccacaggtctatgaagtcttaataagtaaaacatgcaatcattacatgaatttgaacaagcaattcagtagcatatatgtttcgctattacttttattgattcttgtaattattctgccagacctgtgaacatgcaaattatattacttagctcaatttcactcttaatttatctaaatttgctgatgttggaaatataagtacaaatctaatgctgatcataaattattgaacatttcaatagatcagtctagtaggttaggtacccactaaatagagactaggtggcaactaggtgggtctaagtggtgactagactgggggatgttgctggcgactagccgttagttgcagcctaggcagccgtcctggtgaactctgcaataaatacaatgcaaataagtttcagaccaagatgcagtagctgttttggcactctcaggtcaggtaaaactaattttccccatattgtccactcagatgataaaaaacaatttagactgcaatttttagctaagaggcaagtttagggaatactccctccatccacaaaagttagacatatttcacatttgagcttttccaaataagttgttcctatttgtagtctttatgcatccaagacttaaatgaatagataaattaaatgtttgattagaacccaaagagttatctaaatactcattggttgcatgcttgcattcactccttgattttgtaacatgcaaggtgatttaatttctccttggtcttgatgacaaaagtaatatgtgtaacttttgtggatggagggagtaacacttagttacgggattgcaggtctacgaagttgatcttcaagtttaggaacccaaatggcagtttgttagaggttacttagtttgttaattctaaatttcttatgatgctaagtagtatatatgaagcacacaaacaagaggaatttgttttatattttaaagcaggtttagcacttatttggaataattgattggcaggtgctccgtcatatgtggagcatctattatgcaggatagagatcttgggatttacaagccatctgaatcaactacaagtcggcatctgccctgtagccatgagctttgctcaccggcttcaggttgcacaaacccgaagcagccttgtccatacaatattgactacttttcagaaaatacaaccagctccggtttgctaattgaggatatgttacacttggattctagggagggccatgcacctgtgaatgcttctgtcattatagggtatgcttctttgtcttctgcccttttttttaacattaactattgctggagcaataataattatcagattgcttatttcctactagggcattctaattgaacaacaatacaatcacctgcgcgcatggccgcatgtttacttgtacatttactgatatgtcaggtagcagcatgcatctgcatatagaatgaaataattccatttttaaacccctaaactttgccgaatgttcaattgacactcaactataaaatcatttaaccctaaagttagaaagcaaggtgagcttactccctaaggtggtctcagtgggtgcttttgacattgctgttaacatggaaaataactctactgatccaccttccaaaagaaccatgcttgccttaggccttgtgtacataggtggcggttaggccctatcctttccgtctttaaactagaagtgttaattacctttataatattatctcgtggcattatcgatacaacaagtcatgaatgtactcctagaacaaaaatgatacaaactagatgttgtgctctagtatgaaacacctctagtttaatgattagtttgcttaatgaaatttacaacttcattaacatagtgtgtatccctgtgtacagctgtggtaaaaagcagagtggtagctatttggaaggtattgcaccagatggacttcttggtcttggaatggcagatatctcagtacctagtttccttgcaagagctggattagtacgaaattccttttcaatgtgtttcaagaaagatgattctgggagaattttctttggtgatcaaggagtacctacccaacagtctacaccatttgtcccgatgaatggcaagctgtgagtaccccacaggaatagatatgtgtagcaataccattagtttctattctctattttatgttatccattttgggggggtcaagccatgtccactttatattggaagcaatggatgtacttcttgacagttccactcacatgctttctcctttttttttcagtcagacttatgctgttaatgttgacaaatattgtattggacataagtgtacggagggagctggcttccaggcattagtagacactggaacatccttcaccagtcttcccctcgatgcctacaagagtatcactatggaggtaaatatctactccttcggaggaattcttttggtggatatcgcctgtgcttatttatcatgaattcatgattctgcagttcgacaaacaaatcaatgcatcaagagcatcttctgatgattattctttcgaatattgctacagcaccgggtaattttattttgaaataattgcttctgttccatttttgtgagtaatatcagacaagctaacctagcccaaaaacaaaaaatcaaacaagttaagatggtgcaaccacttagtttctgccacttctgattttatgagttgtttgttgcagtcctcttgagatgcctgatgttccaactataactctgacttttgctgagaacaagagtttccaggctgttaatcctatacttccatttaatgacagacaggtatgtacttgagttgtaaaaaaatatcaggcactagcaccaaaaacagtcagttaagggtcatattgagtcatgttgtgtattgtgatctatgcttagaaattccaagtgtcttcttttccgctacactttatttctcaagtccgtgctcttgactcttgagtcttggaactcatatctggcttcatttagcttctttcataatcaaaaatagatatatatagggccatccaagctagctggaagtacattcttttcttctaaacatatatgtccacccgcacagttgttaaatactcgtgttcccatttgatatagcattatgaatcttatagacatggctcagtggttttgactgttgtgctgggagtaaaatgctaatcgttactacactctgttatttcataaataggtttaaatagggtatcaatgccgaaattccttttaaagtttttttgggcaaaatggcatgtatgaatatgacgcttaatgatttctactagaatactactactgaaattttaggatttcctaggttcatttttttgaacttagtaattttgtccttgttgcatctgcatgctacacatattgaactcccatgatttgttattccaccgccaagggtttgacaaaaccaaactctagtaagaattaccagtagaaacccatgttacatttggagctgacaccttaggtatgatgattagtgcatcaactcatacaaaattaaaaccgtaggttattagctggatgttgatgttgtcttgttttatttatttttacagggagaatttgctgtcttttgcttagcagtactaccatcacctgaacctgttgggattattgggcgtgagtacttatatttatattgaaaaatcaattgtttttggtattttatgttctcttacgagacaatactatcgaatgcagagaatttcatggttggctatcacgtagtttttgacagagaaaatatgaagctgggctggtaccgctctgaatgtaagccagaaccatgccacaataaataccacaaaacttctaactacgacgttaatacgttgctgatcatcgtgatttgcaggccatgatcttgacaacagcacgacggtgtccttaggtccatcacagcataacagtccagaggaccccctaccgtcaaacgagcagcagacctctccggctgtcacgccggctgtcgcaggcagggctccgtcctctggcggatcgacgactctgcagaacctacttgctaactctaacatgctgctcttactgactatgtccgtgttcttcatctcatgaacaactcgctgacaatgatctaacttatagtagctctgtaaattgtatgtgcctcgtatatgcctatatggtgtctttttgttgcttagagagctcagtaaatcagcagctgcatgcttctgggtgccgtgccgataagtcgtttcctgcgtgcactgcgtgcagctgtatgtaagtatatgtgtcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0751100, RefSeq:Os02g0751100