Os02g0758100

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Revision as of 02:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0758100| Description = LMBR1-like conserved region domain containing protein| Version = NM_001054711.1 GI:115448792 GeneID:4330787| Length ...")
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Gene Name

Os02g0758100

Description

LMBR1-like conserved region domain containing protein

Version

NM_001054711.1 GI:115448792 GeneID:4330787

Length

7096 bp

Definition

Oryza sativa Japonica Group Os02g0758100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32810678..32817773

Sequence Coding Region

32810959..32811126,32811783..32811859,32812537..32812695,32812927..32813140,32813217..32813303
,32813390..32813529,32813748..32813828,32814316..32814380,32814587..32814762
,32815580..32815710,32815806..32815893,32816039..32816252,32816574..32816680
,32816824..32817321

Expression

GEO Profiles:Os02g0758100

Genome Context

<gbrowseImage1> name=NC_008395:32810678..32817773 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32810678..32817773 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggtgttctacctgatatcgctgcccctgacgctgggcatggtcaccgtcacgctccgctacttcgccggcccaggcgtgccgcgctacgtcatcgccaccgtcggctacgcctggttctgctccctctccttcatcatcctcgtccccgccgacatctggacgacattaactggccgtgagaaaggtggcatcggcttcttttggagttggtcgtattggagcacatttatcctaacatgggctgtagtacctactattcaaggctatgaagatgctggagatttcactgttaaagaaaggctgaagactagtattcatatgaacctgctcttttattctattgtgggggccattggcctctttggactcatattgcttctagtgatgcatagagcatgggatggtggtattgtgggctttgcaatggcatgttcaaatacttttgggctggtcactggtgcattccttcttggttttggtttgagtgaaatccctcgaaacatttggaaaaatgcagactggactcaccgacaaaaagtactttctcatagagtagcaaagatggctgtcaagcttgataatgctcatcaagaatattcaaatgcaattgttgttgctcaagccacttctaatcaaatgtcaaagcgtgaccttttgaggccttatatggatattattgacaaaatgttggctcagatgctgcgggaggatccatcttttaagccttctggtggaagattaggtgaaaatgatatggactatgatacagatgataaaacaatggccacacttcgacgtcaacttaggagggctcacgaggagtactacaggtgtaaaagtgaatatatgacttatgtcatggaagcccttgaactagaagacaccattaaaaattatgaacgacgtgacgcaaatggatggaaatttgtgtcaagttttagggaaagtcgaccgggcacactgggttcccttttggacacaatggagttcatttggcgctgtgttctgaggaagcagcttcagaaaggatttgctattgttcttggctgtatgtcagctgctatactgctggctgaagccactctgctgccaagtggtgttgatttgtcccttttctccattcttgtcaagtccgtagggaaacaggaggttttggttcaggttgctgcatttgtccctttgatgtatatgtgcatttgcacttactactcactgtttcagattgggatgttaatgttttattctctgactccgagacaaaccagttctgtcagcttgcttatgatctgctcaatggttgcaagatatgcacctcctatttcttataacttcctgaatctcattcgacttggtggtgatgccaaaactacttttgagaagagaatgggaaacatcgatgatgccgttcctttctttggaagaggcttcaacaggatatatccattatttatggttgtttatacactattggttgcaagtaatttctttgggcgtttgattaactttttcggaagctggaaaaggttcaaattccagcgtgaggaagaaaatatggatggttttgatccgtctggaatgatcattctgcagaaagagaggtcttggattgaacaaggatgtaaagtaggcgagcaggttatcccattggcaagaaatttcaataatgtcaacacagatgttgaatctggaaaggtgccattggttgaaaatacactggagatgaaatcaggagctacttcctctagagctgacggaagagtaggtcaatccaaatatgctaacaacagagaaactattgctaccaagtattcagctatcagagaacagagcagacaggcagtgaagccagcaaaaaaggaaatttcttcaacttctgtatctttgcttgaggaagggagttctgaacagtggtccaatactggtgcacccgtgggctcatcagctggaatttcccaaacatgggcaacgatgaagattggttttcagaacttcaaagcaaacatgggttccaaaaaattcattcctttgcgccaagacccaggatttgctccacattcaaatgtctcttcgcccgaatcacttgatgaaatcttccaaaaattaaaacgacgtcctgcagatatgcctgtggattaccttgacgatgatgatgacaatactggtgacatggatcctacattcccaggatcaacaagatag</cdnaseq>

Protein Sequence

<aaseq>MWVFYLISLPLTLGMVTVTLRYFAGPGVPRYVIATVGYAWFCSL SFIILVPADIWTTLTGREKGGIGFFWSWSYWSTFILTWAVVPTIQGYEDAGDFTVKER LKTSIHMNLLFYSIVGAIGLFGLILLLVMHRAWDGGIVGFAMACSNTFGLVTGAFLLG FGLSEIPRNIWKNADWTHRQKVLSHRVAKMAVKLDNAHQEYSNAIVVAQATSNQMSKR DLLRPYMDIIDKMLAQMLREDPSFKPSGGRLGENDMDYDTDDKTMATLRRQLRRAHEE YYRCKSEYMTYVMEALELEDTIKNYERRDANGWKFVSSFRESRPGTLGSLLDTMEFIW RCVLRKQLQKGFAIVLGCMSAAILLAEATLLPSGVDLSLFSILVKSVGKQEVLVQVAA FVPLMYMCICTYYSLFQIGMLMFYSLTPRQTSSVSLLMICSMVARYAPPISYNFLNLI RLGGDAKTTFEKRMGNIDDAVPFFGRGFNRIYPLFMVVYTLLVASNFFGRLINFFGSW KRFKFQREEENMDGFDPSGMIILQKERSWIEQGCKVGEQVIPLARNFNNVNTDVESGK VPLVENTLEMKSGATSSRADGRVGQSKYANNRETIATKYSAIREQSRQAVKPAKKEIS STSVSLLEEGSSEQWSNTGAPVGSSAGISQTWATMKIGFQNFKANMGSKKFIPLRQDP GFAPHSNVSSPESLDEIFQKLKRRPADMPVDYLDDDDDNTGDMDPTFPGSTR</aaseq>

Gene Sequence

<dnaseqindica>282..449#1106..1182#1860..2018#2250..2463#2540..2626#2713..2852#3071..3151#3639..3703#3910..4085#4903..5033#5129..5216#5362..5575#5897..6003#6147..6644#aaacgatctcggttaggcacggcgagcccaccaccatcttcccccttctccttcccctccccgcgtcgcctcgccgtgtgcgtgcgcctccacttctccgagagacaaaccagggcgccgatctcgcagcctccacctcctcacccacgcggcctcgcgcttgcgtgcgacgccggagaagaagcttcggcaccggccccggctccacccgcagctccgccatctcctccggccgcggccccggcggcgaggcgaggcgaggcgaagcggagggcggcgagatgtgggtgttctacctgatatcgctgcccctgacgctgggcatggtcaccgtcacgctccgctacttcgccggcccaggcgtgccgcgctacgtcatcgccaccgtcggctacgcctggttctgctccctctccttcatcatcctcgtccccgccgacatctggacggttagatcacccacccctctggatcgcgttcctcgtccgtgtatggattccccccaacaatttctatgccggtgtggttagatccgctccgggctgagctgattgcatgttttagtactgttgcgaattaggttctatgattcgagcatattagggcatggtgtttggggtgttcgacgagagattttttgttgaatcacgcatttaaattgttggtgttggtcaccggaatgaggtctgatgaataggttcaacctgtcgtctatcagagaggccactagttcattacatagttctaacgaatgcatcataaacgatgaatctgaggcaattcggaactatagagaagtgcatatggctttcctgaccccaattagccttggagaagtttccctgtgcactacttgactaccgacagctagtccttgtcgccattgttatgttgatgacgtcatacaaactcttactagaggaacagtttgcagagagacaagtttacttttgacgtctgtgttttaaaaattaaaacactaataaacgacatatatatcctggcaacaaatatttcagtctctacggggactttatctgatcactaggctagaagatgattttgtgaattcatttggtctgaacttttacataacaacttgcagacattaactggccgtgagaaaggtggcatcggcttcttttggagttggtcgtattggagcacatttatcctaacatggtatgctgtcattaatttatcactatcaagtatcaacatgtcttgcaccatttgttccatggttgtgatgcttctgatcctcacagccatctgcaacagttattgatgtgaatgccattatacaataggttgtttcttagaatgatatgttagcactattaccaaatattcaaaacgcatgattcctttcttttgatatgcttcttatttttctgctgccagagcagtgatttagaatatcattcctttggtatcaatgcaatttgtttgatttttaactaaactaagtccatacttgaaaaattattgagtgtgttgcagttctactgcatggtctgtcaatagaatgcttgaataacccttctttgagtgccttctcctgtgatatattgcctgtttgatatttcatagtacttaagctcatgctgttcctgtacagtggcttatactatttgcagtaggacaatccatggtctttcttggctagtaatttagttatgcattagtttgtgttagcatttctagaattctagactatatagatgctgggtgtactaatattgttctatagcttgcaatggtgtttatatttcagaagagcgtttatgtttattttctctaaacatgcatttgctttatttctctaaacaatatccataacatgtatccctaaacagggctgtagtacctactattcaaggctatgaagatgctggagatttcactgttaaagaaaggctgaagactagtattcatatgaacctgctcttttattctattgtgggggccattggcctctttggactcatattgcttctagtgatgcatagagcatggtacgttctaacctccacttattgtccctgttctatgacccatttgatatataaatttagccttgtaatatcttgaagctatcattagctaccaagaatactactactgttcccaacaaaaacatttgtcttgccctgagtcgttgagattacttcttgagataactgctttcatttaaacttttattctgtaaaacccgatctctttatctgcaacaaaaattttggcagggatggtggtattgtgggctttgcaatggcatgttcaaatacttttgggctggtcactggtgcattccttcttggttttggtttgagtgaaatccctcgaaacatttggaaaaatgcagactggactcaccgacaaaaagtactttctcatagagtagcaaagatggctgtcaagcttgataatgctcatcaagaatattcaaatgcaattgttgtaagtatttttttttaaaaaagaaatagtgatgttgtacttgcagcaattttcttaattgttattctttttacaggttgctcaagccacttctaatcaaatgtcaaagcgtgaccttttgaggccttatatggatattattgacaaaatgttggctcagatggtactaatgcaatcaaaagcactacttaatgttgaacctaaaattttgcaattagatgcaacaatttgtgattctgtccatttcagctgcgggaggatccatcttttaagccttctggtggaagattaggtgaaaatgatatggactatgatacagatgataaaacaatggccacacttcgacgtcaacttaggagggctcacgaggagtactacaggtgtaaaaggtataatttcataaactactggttaactggatgataatagctgccctccacaatttcacatttcttttactaatgtcaagtatgacaaatgcaagttatatggatatttcaaataccataaatcttatttgtttagaatgcacaacattgaagttgtgccattgttgccaacttgccattaactgatagttttatacttcattggtgtgattttacagtgaatatatgacttatgtcatggaagcccttgaactagaagacaccattaaaaattatgaacgacgtgacgcaaatggatggtgagttcatttatatgttactgcactatgctatatgctctaattgaatacttatgtcccatactcccataaactgagcatctacctttaggggtttgcaatgccacaaggatattgcacttgtcaattgtctggtataagtgatgctaagtgatatgccccttgtgccgaagaaggtttagttggttggttaaacaggaaaaggggaaattgtgtacaaacagaaaatttcaattgttctgcaaaggtttggttacattattcttggttattataattgtaatctacactggtattagccaaaaaaaaacttgatttggtgggctcttgttgctgtagatgcttatgtttgtcgacttgactatacaatatgcttcaatgatttgatttaaaaatcttgatttgttttaacaatcaattatatttgtctgatgagagatcagaccacaagcagtatgaccttaatttctttttttcccctaaacaggaaatttgtgtcaagttttagggaaagtcgaccgggcacactgggttcccttttggacacaatgggtatttctttgacctatactaacttttttgcaccggttttgtccttatttatttactagtcaaaatggcttacaatgaattcagagatgcaatgttcttagttagaatatttcattgttcgaagattcttagtaaattcaatttactgcttatggctgataagtaatcgatgggattgactccgtaatacttttttgtgttgccagagttcatttggcgctgtgttctgaggaagcagcttcagaaaggatttgctattgttcttggctgtatgtcagctgctatactgctggctgaagccactctgctgccaagtggtgttgatttgtcccttttctccattcttgtcaagtccgtagggaaacaggaggttttggttcaggtaagaaattgggtgcttcatgtaaattgtcttagcctcacgtccactgtacagggcagttctgttatctagtcctaactttctgtaatgcttactgtagtgtgttactcccatcgtccaaaggtataaggcgtattttgttttgttagggcaaggcaactaacaattgttaatttatgtgagacaaaagcattattataataagtacttttgaatatgaatctaatagtatcaaattttatgccacaaaaattatattctaatgagtaattgttggtcaaatgaaacaaaatacgccttatatttttggatagagggagtacttgtgattacttaggtacttagtatatactacaccaattctgtgtacttctctctattggttacttaaaacactcgtaaatttagtaccaggggaaaaatttgtagtacaaacaaatatagggcctgttcactttgatgccaaaaaaaccttaccaaaatttggcattgccaaaattttggcatagttgtcaaaattttggcaacttactaaaattttgacaggatttcttatatagttaccaaaatttggcagcaaactaaatgtagccactttttggcaacttcaccaaaatttgctaaggttggcccatagtgtcagagacttccacaatctttgtatcaaagcatgctattctatttctccattgtttttatacaggatatatttcccttcgaacaaatgaattgcccctgtcttgtcacacgattgtacaattgctgtatgatatctatattgtctgtgatgattcacaaacttttcatttgtttacaggttgctgcatttgtccctttgatgtatatgtgcatttgcacttactactcactgtttcagattgggatgttaatgttttattctctgactccgagacaaaccagttctgtcagcttgcttatgatctgctcgtaagttttctatgttttccttttcatacttgacttgattcctttaccaaagctgttcactcattctacactttgtaccaaatgctattctgcagaatggttgcaagatatgcacctcctatttcttataacttcctgaatctcattcgacttggtggtgatgccaaaactacttttgagaaggtaaaagttgtgcagttcttctgatattcgtttgctatttaaaggtgttggtagttaacattgaaaaggaaatggtctaccccttttttctttattaccatgatatcttgtacctgataatctttgaatggaccttgtgttgtagagaatgggaaacatcgatgatgccgttcctttctttggaagaggcttcaacaggatatatccattatttatggttgtttatacactattggttgcaagtaatttctttgggcgtttgattaactttttcggaagctggaaaaggttcaaattccagcgtgaggaagaaaatatggatggttttgatccgtctggaatgatcattctgcagaaaggtaacgactgactagatttgtctgggtggattccagccctttctttctctttagatcatatactagcctttgttttgttcttattcttcttactgcttgccccttccgtacacactgggacttttcttatttcttctcaaactaaacacaatgtgtatgtcaccattcagtatacatccttgttcattattgaaattagtggcttatcctatcactatcaccaatctctttgtataaacactgaaaaatctggtgcaagtactccctttggttctctgaaaagcatgttccgctgaagtgatttatgcacttctcccgcagagaggtcttggattgaacaaggatgtaaagtaggcgagcaggttatcccattggcaagaaatttcaataatgtcaacacagatgttgaatctggaaaggtgccattggtgcgtaaggatgcttactctgcattcacaagcttgtgttattctatttttcagcttcctattgtttctggctgaattatcttttgccgtgtcacttactggcatttctcctttccattcttttatctacatgttgtacacaggttgaaaatacactggagatgaaatcaggagctacttcctctagagctgacggaagagtaggtcaatccaaatatgctaacaacagagaaactattgctaccaagtattcagctatcagagaacagagcagacaggcagtgaagccagcaaaaaaggaaatttcttcaacttctgtatctttgcttgaggaagggagttctgaacagtggtccaatactggtgcacccgtgggctcatcagctggaatttcccaaacatgggcaacgatgaagattggttttcagaacttcaaagcaaacatgggttccaaaaaattcattcctttgcgccaagacccaggatttgctccacattcaaatgtctcttcgcccgaatcacttgatgaaatcttccaaaaattaaaacgacgtcctgcagatatgcctgtggattaccttgacgatgatgatgacaatactggtgacatggatcctacattcccaggatcaacaagataggttatgatatattcttttagaagttagaatatgcaagctcagaaattaaaacgatttggtagcattagatgcagaacagaagatacaggatgtatagattagatgatggaggtggccttcttggaagctcaggagtcaggacgcctgcccatctggaaagctgcaaagataaaaggatgacatgatgatgacaggttctgccctacgtgtgcagaaaggacagcagattctccaaacaagagatcatgagattatgggacttttctgctctacacatacagtacattgttaacatgtttttgtaacactttggtaatggagaggatgtagtgagtcgaagctgacgagtgtaaaatgtcttggaaaaaaatcacgaatataatgtattaactgaaaaagaagtacacacaaatgtttttgtgtggtggaaattccatttgtcttgtctactg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0758100, RefSeq:Os02g0758100