Os02g0761200

From RiceWiki
Revision as of 02:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0761200| Description = Armadillo-like helical domain containing protein| Version = NM_001054730.1 GI:115448830 GeneID:4330807| Length = 331...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0761200

Description

Armadillo-like helical domain containing protein

Version

NM_001054730.1 GI:115448830 GeneID:4330807

Length

3319 bp

Definition

Oryza sativa Japonica Group Os02g0761200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32939429..32942747

Sequence Coding Region

32939648..32939771,32939896..32940074,32940154..32940261,32940355..32940477,32940848..32940976
,32941366..32941649,32942151..32942462,32942576..32942708

Expression

GEO Profiles:Os02g0761200

Genome Context

<gbrowseImage1> name=NC_008395:32939429..32942747 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32939429..32942747 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatcgcgatctctcaggaggcgttcgacgccatggtgcgggagaacatggaggacctcggcatggacgccgacgaggccctcgccgacgccgtcgacgccctcaccctccaaggtgccgacctctccgggatcatcaagcgcgtgcctggagaggccgccgcggcggaggtgagcccggtgatgcgggtgctggacgaggtgaaggcctcttctgccagtgacagtgacagtggcggcaggtccgaggaggatgctgagaggttggcctctttgctcgacgagttgcgcgagctgtgctccggcgatgggttggagaatgcggcggtcgctgctcggaatggcggcgtggaggcgctcgtcgccctgtgcgcgtcggctggggttaagcaggagagactacttgcctcgggcttgaaggcgctaagctccttgctccgcgatgttggaagcactgaaaagttcaggcaaagcgaagggccccaagttgtcatgggtattttgaaaggaggttcagaaagttcagatatactggaaggtggctttagggttgtggcttcagcatctgcaggcaatgaagttgttaaagagtgctttatggtcctgaaggttgatgaactcatttttcaagttatgggggagaaatcaaatagcaatgtgcaaagcttgtatgatgccatacgtgttctattgacacctgatgacaatcgtgtggtggcttctcaagtatatggatattctcggaggttcgcagaaactgggattgcagcagttcttgtcaatgcactacgtgagaaagttgccccttccagcttaccatcagcttgtgcggctctgaaggcaattgctgtcaatgatgaaatatgcagatccatatctgaaaatggtgggattgatgtgcttcttcgctgtattgatgaggctagtgaacaaaagaacaaagttatagcaaaatcttgctgctctctgctgtccaagctggctggaagtgatgcaaacaagactactatcattgaacgaggtggttttgataagttcttgaagttgacatcgagattttctgaagacccaccaataatacaagaggtaatgtctatggtgactatccttacactgcggtcaccagaaaatgcagctcgtgcaatgggagcagggtatggcactttggctatacaggcaatgcaaaagttcccttcttctgctcaaactcagaagcaagcctgccttatgatccgtaatcttgtcgtcagaaaccctgaaaaccggacgatcttgcttaatgatggtgtggagaagcttattaggaaaaccaagatgatgcacgggagctgcaaagatgctgccacatctgccttgagggatctgggcgtggacaactacaatgcatag</cdnaseq>

Protein Sequence

<aaseq>MAIAISQEAFDAMVRENMEDLGMDADEALADAVDALTLQGADLS GIIKRVPGEAAAAEVSPVMRVLDEVKASSASDSDSGGRSEEDAERLASLLDELRELCS GDGLENAAVAARNGGVEALVALCASAGVKQERLLASGLKALSSLLRDVGSTEKFRQSE GPQVVMGILKGGSESSDILEGGFRVVASASAGNEVVKECFMVLKVDELIFQVMGEKSN SNVQSLYDAIRVLLTPDDNRVVASQVYGYSRRFAETGIAAVLVNALREKVAPSSLPSA CAALKAIAVNDEICRSISENGGIDVLLRCIDEASEQKNKVIAKSCCSLLSKLAGSDAN KTTIIERGGFDKFLKLTSRFSEDPPIIQEVMSMVTILTLRSPENAARAMGAGYGTLAI QAMQKFPSSAQTQKQACLMIRNLVVRNPENRTILLNDGVEKLIRKTKMMHGSCKDAAT SALRDLGVDNYNA</aaseq>

Gene Sequence

<dnaseqindica>2977..3100#2674..2852#2487..2594#2271..2393#1772..1900#1099..1382#286..597#40..172#actcggcagccggcaccgaagccaacaggcggagcaaaaatggcgatcgcgatctctcaggaggcgttcgacgccatggtgcgggagaacatggaggacctcggcatggacgccgacgaggccctcgccgacgccgtcgacgccctcaccctccaaggtgccgacctctccggtaatcacccaccaactcctccacctctccatccccttccagatccgcatctccccgatcttcgcataccctcgcctgatcgagtctctctcctcccgttgcctcctaaccagggatcatcaagcgcgtgcctggagaggccgccgcggcggaggtgagcccggtgatgcgggtgctggacgaggtgaaggcctcttctgccagtgacagtgacagtggcggcaggtccgaggaggatgctgagaggttggcctctttgctcgacgagttgcgcgagctgtgctccggcgatgggttggagaatgcggcggtcgctgctcggaatggcggcgtggaggcgctcgtcgccctgtgcgcgtcggctggggttaagcaggagagactacttgcctcgggcttgaaggcgctaagctccttgctccgcggtaagttgatgttattacctctgagatatgaggatgtgttctgttttggttatgctattattagtttcttacttcttactgttgtaagcttaagttttttgttgtgattagaaattctgttgaactaatactattagcatagaggcagtagaaattcagacttgtttctgctggtcataaatttcttataacatgcaagtgtgagaatgtgttggaatggtgtgttgtagtaagaaatcaggtacagactggttcattcaaaattcatacaattgtgaaggtagactcaccatccaattgctaggttcaaatggcattaagtcaaaataatggactggtcccattccttgatctgtcagcgcacatgcaacataaacttgtcaagagtactgtacttccatgtccgttgcagtgtcttgcattcattttcataatattatcgataagaagaagcaatctctgctctctccctgacatttgaggtaacaattcaatctgtagatgttggaagcactgaaaagttcaggcaaagcgaagggccccaagttgtcatgggtattttgaaaggaggttcagaaagttcagatatactggaaggtggctttagggttgtggcttcagcatctgcaggcaatgaagttgttaaagagtgctttatggtcctgaaggttgatgaactcatttttcaagttatgggggagaaatcaaatagcaatgtgcaaagcttgtatgatgccatacgtgttctattgacacctgatgacaatcgtgtggtggcttctcaagtatgtcctatatgcttgtgtaattgtgtgaatatttggtccagttttgcattagcaagtggacctatttgcactttattatgaaactttagttgtcaactctccgtaatctatggtttttggtagtattaaagtattaaacattatgatgtgctagagttatgtttatagaaaaagagtcatatttgtgattgtgcatgcaagttagtttacatacatgagggaagatgtagatatggaattaaattgagttataatatgcacagcacatgtagtggaaatatccagagaacctttattgtaataattgacaatctagccatttgaaactttttaagtgaatggaatttggacataggagatgacattgaccaacatttgtgatgcaggtatatggatattctcggaggttcgcagaaactgggattgcagcagttcttgtcaatgcactacgtgagaaagttgccccttccagcttaccatcagcttgtgcggctctgaaggcaattgctgtcaatgtaagagaaaactatggttatactggaattcaaaagtttattttgaactactatagatatttcttatgccattaattcaatgtcatctggcaaaaagaatatgaattgctgctgctgcaattgcatatggttaacatttatggtaagcaacactttgaaaagtacggtgccctttataatcaacttcccaccaccatcttgctcttgctattttttctcatgcttttgatccctgttgtacttgtaacaagatgtctttacctggtggaactgttgtcaatgtccttaaccaaaaacaagctgcaagctatactcttatgacttatgagctgcctcaggataactttactaaattcttgtgttacctcaggatgaaatatgcagatccatatctgaaaatggtgggattgatgtgcttcttcgctgtattgatgaggctagtgaacaaaagaacaaagttatagcaaaatcttgctgctctctgctgtccaaggtctgtagtatggtacacaaatgcatcaatcctgtaacagaggaaatcctacattgatgaatcatacttacagaccattctttctgcttgaagctggctggaagtgatgcaaacaagactactatcattgaacgaggtggttttgataagttcttgaagttgacatcgagattttctgaagacccaccaataatacaagaggtactgccacattgcatataaatgagaaatactgaagcatctatgtgcgctaacttttacaagctaaatgaatgtgtaggtaatgtctatggtgactatccttacactgcggtcaccagaaaatgcagctcgtgcaatgggagcagggtatggcactttggctatacaggcaatgcaaaagttcccttcttctgctcaaactcagaagcaagcctgccttatgatccgtaatcttgtcgtcagaaaccctgaaaaccggtatgctgtacaattcacaagcactactgtctgctggcatgacctattcagaattaaggcatttacagttcgatagtaacatgcttctagtatcagaatgttgacttatgtgctgccattgtaggacgatcttgcttaatgatggtgtggagaagcttattaggaaaaccaagatgatgcacgggagctgcaaagatgctgccacatctgccttgagggatctgggcgtggacaactacaatgcatagacagggaaatgaatttactgtgcgtaaattttggcaatctgaggatgttttgggggaattaatggtgtgtttgggttgataggattttggctatgcttgtgcgtggtctcaattttgtggaattagtggtgtgttgggttgctgcccctgcaaactgcttcagctatgaatttgtggaacaatagttcagtaacacgaggcgttgaaaagaattgcacg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0761200, RefSeq:Os02g0761200