Os10g0446600

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0446600| Description = Conserved hypothetical protein| Version = NM_001189250.1 GI:297727630 GeneID:9272437| Length = 8672 bp| Definition ...")
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Gene Name

Os10g0446600

Description

Conserved hypothetical protein

Version

NM_001189250.1 GI:297727630 GeneID:9272437

Length

8672 bp

Definition

Oryza sativa Japonica Group Os10g0446600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16608614..16617285

Sequence Coding Region

16615643..16615665,16615771..16615905,16616000..16616084,16616383..16616475

Expression

GEO Profiles:Os10g0446600

Genome Context

<gbrowseImage1> name=NC_008403:16608614..16617285 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16608614..16617285 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccagcagcgagcaactcatggcaccagagacggcggcggcgacggtgactactaaactcttggcacaggagattacaaaggacgtgcaggtgaactcaagaagaaagttcgaaaaatgggacattgcaatcacaacattggaacctaatatcaacactatgctcattgccatagtgccaggtaaagaaagggactacaatgcttattcaaaggattatatgtcttccatagtgaagcagtcatgcactaatactagaagctgctttagagatggagacatcccgtcaaaaatctgcaattacccaatgattttgtgcctgaggatcatataa</cdnaseq>

Protein Sequence

<aaseq>MTSSEQLMAPETAAATVTTKLLAQEITKDVQVNSRRKFEKWDIA ITTLEPNINTMLIAIVPGKERDYNAYSKDYMSSIVKQSCTNTRSCFRDGDIPSKICNY PMILCLRII</aaseq>

Gene Sequence

<dnaseqindica>1621..1643#1381..1515#1202..1286#811..903#actgccgcctccgcctccccctcacgccgtccccgttgcctcgcgccgccgccgcctccccatcgcgctgccacctccgcctcccgccgttcccatcgcaggccgagctgccgccgtccgtctcccctctgccctctcgtcccccactctctccctctccctttccctctccctccgccgtctcctcccccaccctcgcctccgccttcccgtcgcgccattgcctccgcctacgcagccgctgtcgtcgcgtcaccgtctccaagcgcctctgcttccgcctccccctcgcgtcgtcgccatcgtcgtccccgtctccctgcgacgctggcgccatcgcgtcaccgtctccgaccgccgtcaccgagtgcagccgtctccgcctccggcctccgtcaacgacgaggtcggagcgccgacggctgcatcacaggcggcgcgaaaagctgagggcccaatcctggcggcgggactgccgcgaggttccggacgcatcaactcgagggggagacggcggagggagtgggggttgaggcgggcgcggtcttcgtcctcccggcgccagatctgcttctcatctccacaaggacaccccagcccaccactcatcggcgtcgccatggtcgtcggcgtcgccctcattgtcgccgtcgccaacagactgcgttaagaagccactccaccaccaccagcagcaggggcatccaccgtacgccgcaccaatgccttccccttccctcccatttgtgccctctgggtcacaggtagtcgcttcatcggcagccgcgttgccgtcaatgtacaaggccaatgaccagcagcgagcaactcatggcaccagagacggcggcggcgacggtgactactaaactcttggcacaggagattacaaaggacgtgcaggtttgtgtgagttattcttttaaggttgccatgaggaatagttaatctcgttttttcccctatacaccatgaattgttgcacatcaacattgacagtgattttcatttttttattaatgcaatggagcaacctaaggattataccaatttaccaggtgctctaatgccactgttggtgatgaaattttgagagaccctaatcttgccatgtttacgatgttctacagaacctgcatccattccatctaaaagaactcatcagctgggattgaagtactgatcagatctttttttctaggtgaactcaagaagaaagttcgaaaaatgggacattgcaatcacaacattggaacctaatatcaacactatgctcattgccataggttctcccatttgtatagcatttagagatttcttttttttataaaaaaaattgtgaacaatttccataaactcacatcaaggtgtctcaagcagtgccaggtaaagaaagggactacaatgcttattcaaaggattatatgtcttccatagtgaagcagtcatgcactaatactagaagctgctttagagatggagacatcccgtcaaaaatctgcaattacccaatgagtgagccattttttccccatgattacttactatttcagacttgtatttctatacatgtggcaccttttcattccagtttttttttgactgggcttttcattccagttttgtgcctgaggatcatataaatgactctgatcaatcgtccaccttagctggttgctctgcttgctgtgaccatgccacgacatccgaaaacacagaggaccaggttggttagccatatttcatactcgttgccctctgaacaatcaatagagaatcacttctagcaatctgttatgattcatttccagatgcattaatctattctctttcttagtacttttcttggtattttaggttttcttggggcttagttatagaatagggttttggagtgtgtttgtggaaaaatttagaagcttcacatactggatgaatttttttagtagttagcgtattggttattggcagtcaaatttttttagtacaactggtaggaggatgagcttatatttggcactactattcagaagatgttaatctcaatctcccattttactgtacttaatgttttcttaaatgttactccctccatctacttttgatagtcatatttcatcttgacacacagaccaaggataagtaattttacttatcattcatttaagcatgctactagtcattccttgtaaacaagcgattcattaatatttacatttctcaaagcccatgtagccaatcatgtgtggaagaatggagagtcacgcattaaattcgagaaaatcattaagatgataggttgttggattgaaatatgcctatcaaaaataaaattttcagatttggaaatatgactatcaaaagtagatggagggagtaaatacttaaaatgggactgcagttggtcactgatggttgcttgatagccataaggaaaagagagacaaaaataatgaattcatgcagaggtttcagtcaattgcaaataatatgagattggttgacttaaaattgaggatggtgtggtatgatgagcctctgttgatctgatcattttcctttttcatgtcaggtttgacaactttggattgcataccagaattttccatgttcttcagctctcaataattcatcttcaggtaatatgatggtagtataggtttttagatgatttgcatcaaggggtgaaaataaattaatcagcactgcaacattgatctttcttatgggttgtcactttagctaccacaatgcttatttgcaagctcgtgatgtgttgcaagatctagagtagtctagagaaacctatgtcataagcgccacaattccaaaccgaacctcccccagtgtactgttcgatgtggctgctatagttcttttactaaaagtatgtaaatttatttgttctatggcttgtgtagaggagaaagggaagtgaggaaaatttgtaagtgacgaatttgacagattgcgacgggcaccagttatgctggtaattttcttgaacctgacactaatttcagggtacgtacattcttaatccaagccacaacaatgtctgagtggttttatatgtcgaccatctgtagtgtcttcttaactgttcattctgtctcaccaagactgaagaatgcatttctcttttacctatgtatattcagtactatgaggtcagatatgcagatatacttcttctacttcataaatttgtggaatacaaataagctagggcgaagataaatatggcaggttaaactatccgtggatataaaatatgtcatcaagccttagatttttcaagattatcaggaagtgtatatttcagactatgtatttactttattttgtttcaagtgatgtaaagccagattatttttggtcttgtttacattgtatcggtccagaggttttgttccttagaatcatcttccattgtatgagcagcatattccaagctgctcctttaaaggaatcactcgctttccatatatgcagtatatttttattacacgataacatcactattaattggtatctatatggaaattaaatcatgccaatatatccagtgaaaccaagtgctattggttgatagcagtaaagatgtgttttctctggcattttaagttgcagtgttctgatgacttctaattactaatgatgtgatgcataaattctatggctggttctgttatttctttttatttgaacgtaatttgcttcaatgatttgatgtggttaaaggagaaaatatctaaggccatgtttggtttctcaggagtccaggagttggagccatgcaaacatacatcatgctaatgtcgtcctgagcttccagattaggccctgctgtatcgatcaatatatttaggtcagttgaggctctaaattaattctgatgataatttttattctgctgtatttgacgggcctcatgcatctgaagatctggattactgtggccgaattcgtgttttgattttggggtgtaaaatactgaaatcaataccgttgtccttgctttcatggggggtatttggtgatttggttacttcgattacatcgagttggaatgtcaatgctctctgaacctcgaatttattactgggttaccgcattagattattggcttcgcaagctgggccttgtgcaaatgatcctgcgtgaaatatgcacataatttacttccctagacgagtttctgctaactattctatagatcatttgcataacccagcagccagctgtttctctcttcttccttttttcccctctgaacatgtttacttaggtcaatttccagacattgaaatgtcttgcaagatcaaaattcaaggttactccgctcattctgttttgagagagttcaaggctagaagagtaaagttagtaagcaaataaaaatgatgcaaagaatatacttgatcagagctaagaatgctctcataagtcataagtctgaactcccagaaataaaacgtcaagctcttagaaacatgatatatgccatttaaaccttaagtgcccctttcagttttaagggtagaagccatgtcttcttggatgctgtcttttgattttccgtcaaatggatcgtctcctttctagagatctaaaatagacttgcacaaaagcatgctgtgtatgctccccaattcttctccttcaactacacaaaaacacagaagataagcttattaaagaagagcggagtgtgcctgtttaaattttacctggaactaatatgaaatgaaataagcagcaataaaacgtgacagggatttatcatggcattgaaatgctacctcacagtgttacatgattatgatgtttctttcttctttcttttccttttggcatgataaaatgaaaacaggataaaagttggtttaattatgaaaaggccatggatttactacagcattatctgtgatgacttatttgctactcttcatgcactcaatgctaggaccaaatgcatgaatagaatgagaaaatagtcctaggtattgggaaactgtatcagacacatgcccattcattctaacaacatttcagtttgattctcaaaattcttcatgccatcaaagtaaatactatctgcactgtctcaaatcaactacaaagctgtcaataaaaaaatgacaaagaaacagaagaaaaggtgaagatagagcttactacttattttaagcacatgtcttgattctcttgagggctcaatcacggaccccttcggtaatttgtattcatccttgaaaagtgaaatgaaactgtggagaccaaggtgtcaaagacagaagaaacttgtgtagttatcattttaacttgacaaaggtatgctaagattggaacttacgcattaacaaaaaaatagtggaacaacattatttactaaacagagtgacaaacctgaaactataatatgatttatttttctcagctgatgattagttctgaatcagtattgctcttcttgacaaatgacctctctctctctctctctctcagcatgatgacagcattatttctatacatggggatattgtgtatccggataagaatagcattatttgtaggtaagacatatataagaagtaaatgtatttctaatttataaactgagaatgtattattaagtgctttaacatgtcatatgcagaagttgctggaatgctagataatcttgtcctcttttaaacatagcatgagaattatagtagaatcaagatgctttcctttgcttggtaaaaatgttttggactgcatttcagaactcataccatcatctatttcagtgtaattacattattctgcagaaagacacacaaaactatcatggaaatatggaatagatagttctatatttataaggcatatagttcttaattcttttaatcaagctgagtgctgttttgtgtggttcatgaatctttgcgttacctgtaaagctgtggtttatatatttctttgggagctaggttcgcttggtaatataattgactggtagtaatatacattggttgcactttgaatgtgctgagaatggggtcaccttgcatgcttttttatattcttaaataatgatgaattttcatgtgaatgtatgtatagcatccacattgttcatgtcactgattaggaaaaatgtattatttgttcacgtatatctcatttgttctctgtgttactaaaggctggaggctatagaaaaatatttcagccttgaaacagtcaaggacattgtggaagccatggtgagtgatgcttcagttgttttatacttccaaatctctgggcatggtatgtgctccttttcatttgaacatgagtaagcagaatgctgttgattggtacgatagctttcaaggctacattttatttccatctcattatttactcaaatgaatctcgtggatattttttttggaattatcaagtatttttttcaaatatagtagttatcgttaccgttttggcatagattttgttccttaggctaccttttagtttgatcttgaaggttttggttccatatacataaattttgcttatggttcaaaacttttaaggagatgttgtaaacttgtaatcaggaaagtgaagcatctaagttagatgaggattgttgtaccttggccatgaaatgactgagagagccctatccagttctgttgagagcctcacagtgtttggtaagtaaagaaaatagaaaagctcacactgccattgccgatggctgacagattttattatatgcctgtcctacagatgaattgcaagctacaaatgctttgctgtagatatgaattgcaagcttacagaaaaggttttgcactgtgggctaaaaagtcccattaaccaggaaggtgagtgttgtttttctcctttaatataagaatttgctacctcaatttttttttactcatgtcagcactgagatataatactgatacatggattgatgctgtattatatacatactcagttttttaatagatgacgccattgactttttctcacatgtttgatcattcgtcttattcaaaaattttatgcaaatgtataagatataaatcacacttaaagtactatgagtgataaaacaactcataacaaaataaattataattacgtaaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacatcgtcatctattaaaaaacggaggtagtatttctctagcttttactcatatgattaagatttcttttaaatgtcaatatatcttctttttatgtatttaagcgtccctttgtgcttttatttttggtttgccagtttatgtatttcatttaagaaaggtgtatggattacatgtatataatcctcgcaaaaaaatgcatgtatatattgtggatttagccatctattttccctgctctttcatgctttcaaaagggccagcggtcacttggtattgtgtgggtgctctgcacatggctatttttataaatatgtaaatcatgttcgcgtatccctgcatcttatgctagacgttgattagttttcagcaaaaaattgggaagttatacttggttgaaattagtattttgtcgatggttatcataaatatatcaagagttctaaactagaaaaaaaatggtatccccaaatctaaaatatttcctgcatagttcacgttaaatgaaatggcctcatgcatatacaggagtatctaatggaatgattcactcatttaccaaaaagatagtacaatattattcatcatagaatgctaccatcaccaccactattttttttatatcagtaaaagatggatgagcctttggagatttattagttattaagttacttatgcttttctcactttcagcttgaaggatactaatattagtaattccacaaatgacacaatagatatgctacaactttggctccacttacactatcctgtatatgactacaaaactgcagctgtgagaagatagaatgtcattacttcaagggtaaaatcctattttttttggtttataacttgatgaatgtgattttgcataatactcttatatattgctgctacctcataaaaatacattcatggatcaatgttcctctagcactgataggcctagaaacaaggttgtccttttttcccttagtgtgtgcgcgcactatgataagatgttactattagggtattagtatgtacctgcaggtctgcaggttcttttgaatgtgatttaattagctaatgtttgctttcatttcaacctgtttacatttttcaggatgtgatgcgatgctgaatctaatattggaaagtcaagccctttgttcttcaattgtcctatttgcaaagattatgacctttcaatttgtcatcaattatttatgacaccaatgcattctcttggtgtatgcaccaaagcaatttgtacgcggaattacttatattttttatataatgaaagcattgtgttcatgtttgaactaaaagtcaaacaaactgaggttttagtaggggatgctttgcattgataataaagtacccattactttgtagttacatgggatatttgttacataggatggattactgactcaactctggtgtcattgatatacacaggagagttaatatagaatatatgatgttactaatatattta</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0446600, RefSeq:Os10g0446600