Os02g0763900

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Revision as of 02:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0763900| Description = Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1)...")
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Gene Name

Os02g0763900

Description

Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1)

Version

NM_001054747.1 GI:115448864 GeneID:4330824

Length

8036 bp

Definition

Oryza sativa Japonica Group Os02g0763900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33066216..33074251

Sequence Coding Region

33066318..33066417,33072602..33074103

Expression

GEO Profiles:Os02g0763900

Genome Context

<gbrowseImage1> name=NC_008395:33066216..33074251 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33066216..33074251 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattccagtcgtcgtcgtcctccaccggtgtgcggtctcctcctcctggccggatcgggttttcgaagccaagcacatcgcgggagccggcgagcaagatatgcaagatgatctgcctgatgatctaactgcatctcagtacatcggctatgacaaatttctgggtggtcttctgcaagagggatttgatgaagtatcctgccgaagcaggtatcagtttgcacggtaccacaagaacttcacaagaataccttcttcatacctcttagaaaggttaaggagacaagaagcattgcagaagaagtgtggtccaggcactaaatcatacaagcaagctgtgaagctgctgaggtccagtcagggcgtcaacatgacgacagattgcaactatctgttcttgacagtacatgctgggttagggaacagaatgcttgagattgcttcagcatttctttatgcactccttacaaaccggattttgcttttggaccgttatcaggagatcggtgaccttttctgtgaacctttcccaggaacctcgtggttaatgccttcggatttccctctaaactatggtgaatttactcagagtagcccagagagctatggaaacatgctgcagaataaggttgtcggtgacaatacagatcagtctctggctggttctaggcctccctacgtgttcctctaccttgatggtaactatgaattccatgacaagcttttcttctgcgaagacgaccaacagttcctgcaagatgtgccgtggttgatcatgagaaccgacatgtactttataccatcactatttcttattccaagttaccaagatgagctcagcaggctatttcctgagaaagatgctgtttttcatcacttggcacgctatcttttccatccgacgaatagcatatggtattcagttaaagggtactacaggtcctaccttgccaaagctaataaaactgtgggaattcagatcaggatatttgagaaagagggcatcttgcaaaaaaacgggcgatttccatatgtcttagaacagatcctttcatgcgctcagaatgaaaagctgctgccagaaatcagtatgaaagatgaagcagaagcaccgaccgcgcccaagaataaccagacaattgctgttcttacaacttctctgagctcctggtacagtgatcagatccagaagaagtacagtgagcacccaacagtcgatggaaccagggtagaagtataccagccgagccatgaggagtaccagagatcaaagaacaagaagcacaacatgaaagcactggccgagatctacctactcagcatgacggacgtgctcatcaccagtggcttctccaccttcggctacgccgcgcagggcctctccggcctgacgccgtggatcatgttcaggtcggagaaccacgccatgccggacccgccgtgccgccgcgccatgtcgatcgagccgtgcttccatcaggctcccttctacgactgcaaggcgaagaggaacgctgacctgggcaagatggtgccgttcgtgaggcactgcgaggacgtcagttggggcctgaaggttgtaaatcaaactcagtggtag</cdnaseq>

Protein Sequence

<aaseq>MIPVVVVLHRCAVSSSWPDRVFEAKHIAGAGEQDMQDDLPDDLT ASQYIGYDKFLGGLLQEGFDEVSCRSRYQFARYHKNFTRIPSSYLLERLRRQEALQKK CGPGTKSYKQAVKLLRSSQGVNMTTDCNYLFLTVHAGLGNRMLEIASAFLYALLTNRI LLLDRYQEIGDLFCEPFPGTSWLMPSDFPLNYGEFTQSSPESYGNMLQNKVVGDNTDQ SLAGSRPPYVFLYLDGNYEFHDKLFFCEDDQQFLQDVPWLIMRTDMYFIPSLFLIPSY QDELSRLFPEKDAVFHHLARYLFHPTNSIWYSVKGYYRSYLAKANKTVGIQIRIFEKE GILQKNGRFPYVLEQILSCAQNEKLLPEISMKDEAEAPTAPKNNQTIAVLTTSLSSWY SDQIQKKYSEHPTVDGTRVEVYQPSHEEYQRSKNKKHNMKALAEIYLLSMTDVLITSG FSTFGYAAQGLSGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADL GKMVPFVRHCEDVSWGLKVVNQTQW</aaseq>

Gene Sequence

<dnaseqindica>103..202#6387..7888#ggctggccaccagcgggccgagccgcggagaacgaggcgaggcggtggggaaggctccggcgagcctccgcgcgcgccgcgctggtgctctgctcgctgacgatgattccagtcgtcgtcgtcctccaccggtgtgcggtctcctcctcctggccggatcgggttttcgaagccaagcacatcgcgggagccggcgagcaaggtacgtacactcacaaaagtcccccagctactcgatcgctgggtcgcaccacctgtcctatacgcccctctgaacaaattcgctctagctgttcgcacgcatccgtggtcttgcttgattcggtcgccgtttattatgctcggtataactgattctgtcggcgatgaatcggcgcgtcgtatctgcccgcgcaacagcgatggcttttgtgatttcgaagaggtggagagatgctgggttaagcacgagctgtaacaggctaacagcttggaaagcagaaggggatcgaaggcggcatgaaccttccttggagcgatcgtgaaaagcagattccattgcccctctcctgcttgtattggttgcgctagctttgtccaatctgaagtggagttggtcacatttaacggattcgcgaaaccatacacgagccagagaaaataatttccacttgagaaatttcagatgtcgatatgtcatcgtactacgaggtagcgtcatataggcgtggttaattaaccatcgacccatcatattgggttgggttttttttttttaacgactcgcacgagacggtgcgaagttatattgatagagtagaaaaaaattacaaggttacaccctagagggtcgtaaccagaaaaaaggaaaaaaaaataaaccaccacccacacggcgacaatgccatcacacaagcccaggagaaggctaacaccggaccggccgccgctaagcgtgaccgaccgccagtaggccaacaaagggacacagacgaggttgccacctaggggatgccaaaacgacgtcttcaagaagagaagcgacggagaaaccgccgccatcgtccgtcaggactcaaaagagccaagagagggctttcgcccggcaatcacccttgaggggtgagacagcacgacaacaccctcatgaggggggataaccattgtttgtcggtccgaccatggctggactgggttttcatccgccgctcaccacttgcgaatccacgcctgacgcagcgatgctccaccaccacacaagctttgccgacatgtgggacccctgcaccggcgtcccccgtcggccagtcttcgtgcgccgaagaccgcgccacacccactggcagctcctcctcacacctaggtcacctcctccaccaccggacgcgccactctgcgccaaaccggcctcctccaccagacgcgcctcgcgccaatccggtctccctccatcggccgcgcctcctgcgccaagccggcctccatctccgccgcccgcgcctctcgcaccgagccggcctccgctgtcatcggctgcgcttctctgcgccaagccggtctccgacccctccaccaaacgatgccgcgccggctagatgtagtcgcctcccacgccctcagctagccgtttgaggccgccatgccttcagtgaccgcagacacagtcaccaccaccgcagccgctactacctaacgcccagccacctcgccgtcgccagtcgccatcctcgcctcgcagccgactccttccccgccgccgacgtcgccaccgcctgcacaaacggccgccgtcgccgctaccatcgacgccagccctcgtatctgcaacctgccgctgtgccatcgcccttcaccagcatgcggctggccgccgcccgatgccatgtgcgccactgccgccatcaccagccaacaccgcagccgccaactgccgcgaccgccgctgccgtcgccaactgccgccgctgccgtcgcccaccgccgccgctgccgtcgccgcaccgccgccgtcgtcgccgcacagccgccgtcatcgttgcacagccgccaccaactgccgccggccaccctccagatccggccgagaggcgcggatctgggggacaccgtcaccgccgtcgttaccacaagcccacacgggaccaccaccaccaccttcgcgcccgcggccggttccgtccccgccaccatcgccatccccgccgccttcagccgccgccgcccggcgccacgcgcccctgccttcgccgtcgccatccccgccgccgtggccgggtcgtcgtctcccgtgccgccccaggggaggacgacgcgagaggtgtatacattactctatgcatctaactatggagacgtcaaaagtcatattgggttgggttgttgacacttgacaattcccgcgaatgatcctccgtgttgtccggccgcccgctctgcattttcctgtacggctgggcagtgggccatatgggggtagaatgacgcgcatatggatgccagtctgccagatcaaaaaaaaaaacaaatttctttcatcctcttctttcgcttttttcaattgagatccctactgcacatacaacctgcatccaatttctttaccttttcttggcagatgacaaggaactacagtactcctgtacaacccaaaaatgactcttcgtttccttcaattatgttgtaacccctgttttcaactctaattatgatttcactaatatttctcctgcttttttttctaactctgtccttatttttctgaaatgaagcttgtatttatccccattacgttaaggtgatataataggataaacttcatgtataaaccattttactcgtttcaacatgatctttttacttattcaattaaaaaaaagtgaggcataaacttaacataaatctgtccactgttttgacatcaatattaaaacagttaaagatgtgttcgggaggtgaggacctcccgcgcacgtagaatggagcgacgtattatgattaattaatactttgcttttttaaaaagaatggattaatatgatttttaaagcaactttcgtatagtttttttttcagaaaatatatcgtttagcagtttgaaaagcgtgcgcgcgaaaacgaagggaggtgagttaggaaagttagggaaagaactaagctaagtcgtcattttgacgtaatagtgcaattagaaggttcatttttatatagggagaaatcacaaaactaaaaggagtaaaaatcataacttgcgttaaaaatgaagataaaaatatagaaccgctagctccttttatgtttgaacttgcacttacgtgtaggtgtggtatatgtgcgtaggggtgtgcgcacatgtagtcttccatcatgtaatcgggaaaaatagttatacatagagggatgcacgtgacattactccttccgttttccaatatccggtaattttgatttctccttttaaactttggccattagctgtctttaattgttatgtagaagttaacaatagttgtatgattaaatttaggacatacccatttcaataacatggcatcaattttagtgttcataaatattaaaaatgaaacgagtgatccaaaagccaaatgtgtcctgtataataactaaacgaagggagctaattaatactccatgattatgaacatccatgatcaaaactcgtaggactcatttgaaacacagaattgaataaaaaagagaagtataaaaaataatacaagattttgattaagatattttgttttgcttattttgataggagtacaatcgcaaaatagagaactgcaaatatatggaaatcactgtctgattaagctgttggaaaaacataaatcagaaatcggatgcgagatagactgatagaaaaatttttaagaggttagagttattgctagtaagtttttttttttttgccaaatttcacgtgcaacgactcaatgagccattctacagggattttataggattaaaaaaatctccaatcctttatactacctccgtcccataataattgtatttatactcttcaaattttgtcctacaaaaattgtatttctgataagatgagacccacaaatggaatttgtatcccaaccttccttttaattaagtttacatatggaatgtgtgcctcaacctttcttttaacaaagtatacatatgaaatatatgcatgcaatgtagttattaaatagggttattgtggtaaattgtgtttgttgttaatatgtctctaattccctagaaatgtaattattatgggacggagggagtatcaaaaggtcaaatagaaaaaaaaatctatagaaattaaatcctatgatttttttctcacaaattcttttgattcaaattggccctaaaaatgtaagggtgtgtttagttcacgctaaaattggaagttttgctgaaattgaaacgatgtgatgaaaaagttgaaagtttgtttgtgtagaaaagttttgatgtgatagaaaagttaaaagtttgaaactaaactcggcctaagacgggatgtaaaattggacgaggagattacaaaattattacatgtactctactgtgccattacggtccgaccccaccaaccactactggctcagacacgttgtctacctccgctgcccgtgcaacttgcgccgcttgctgcgcccacgcgcagtcgcagacgcagccgatggccggctttgtttgacccccgttcctcccccccgtccccaactccaactgctcgcctagcaaagcagccttgcccatcgagacgcacatggagaggagcggcggcggcggggcggacggcgacgaggagcggctgccgctgcaccatgggtttgagacggagagggcggctccctgggcggcggcggagtcgaagccgccgccgccgccgcggggcaggttcgggcgcgcctccgtgcgcgccgcgctggcggtgtgcttcctggccatcccggccgtcctgctcctgcagcggtggcaggccgggtcctcgccggagtggctcttcgaaatcgagcccccggcggacggagaccgaggtgtgtatacatctgcttgtggccgtagctttctcctagcgccgatgaggccatgaatctagctagtgcttttaattgtagagttgtattggtagatttgtagtgtataaacagtagaattgtagattcgattgtactccacgagctattcaatttgcgctggtgcgggcccacctgtcagtggccgatccatccatccacatacagcttgttcgctggtagtcttgccaaatttcacgatccgtatgagttttgaacagcaaggcgttcgctgtagaatgaaggtcgcacttcagaaacttactagacaagaagtcatttggcgtgctttaaacgaaaacacagttacatcgttcaaatagaacgttcaacccagttacaactctttctttgttgaccgaaacatatacttaattctttgtcagggtctcagggagcatcactgctgtcctgatgtctcttgaggtcctaatggatgttctccacatgtttttcccttctcttcaatctaggactgttctataattcactgtggattaatgttgctagcacaactccactagatgccccaagagaacttttgtgtcatcactctctcaaagagtctagctgtgaaagaataaagttggttcggttctgattctcattattgctaattgagatttcagagatcaccttttccttctgcaacgcctctgtcacacaatggtcgttttggtctaagcatagataaggtagcaatcatttaaatcagcaactttgcttaaattgccacctttctttagtctaaaaactatacatggttcattcatataataaagtaaaatcatttaatctggaatgacctaaattatcatgattgtggacatactaccctggaactggaagagtgtgcaggactagaccttgctgaaacatgtccattttgttagttttagataaaaccaaattaggggacatcaaagagctatttcctccattacttctcatcttcctttaatctgatctgtcgaatttctgaaggacagctttgtgaagtacggactccacatggagcacgtgatttcttgcaatttgcaagatagttttgtgggtaaaagaacaagcattgcaataaaaattgtggtaggcttttagttgttcttctttaattctaaaaaaggaaacctttttgtggtgaaaagaacgaccaatcatttcatattaaatgcatgtatttaattaatcagaaagtggttgtgaaccagtcatttttgcatgcttcagtcagtgtagttcagaggacagtaactttatctgtcaagttatttggggtaatgttctattgcaatgacatacctctatcttcttcagatatgcaagatgatctgcctgatgatctaactgcatctcagtacatcggctatgacaaatttctgggtggtcttctgcaagagggatttgatgaagtatcctgccgaagcaggtatcagtttgcacggtaccacaagaacttcacaagaataccttcttcatacctcttagaaaggttaaggagacaagaagcattgcagaagaagtgtggtccaggcactaaatcatacaagcaagctgtgaagctgctgaggtccagtcagggcgtcaacatgacgacagattgcaactatctgttcttgacagtacatgctgggttagggaacagaatgcttgagattgcttcagcatttctttatgcactccttacaaaccggattttgcttttggaccgttatcaggagatcggtgaccttttctgtgaacctttcccaggaacctcgtggttaatgccttcggatttccctctaaactatggtgaatttactcagagtagcccagagagctatggaaacatgctgcagaataaggttgtcggtgacaatacagatcagtctctggctggttctaggcctccctacgtgttcctctaccttgatggtaactatgaattccatgacaagcttttcttctgcgaagacgaccaacagttcctgcaagatgtgccgtggttgatcatgagaaccgacatgtactttataccatcactatttcttattccaagttaccaagatgagctcagcaggctatttcctgagaaagatgctgtttttcatcacttggcacgctatcttttccatccgacgaatagcatatggtattcagttaaagggtactacaggtcctaccttgccaaagctaataaaactgtgggaattcagatcaggatatttgagaaagagggcatcttgcaaaaaaacgggcgatttccatatgtcttagaacagatcctttcatgcgctcagaatgaaaagctgctgccagaaatcagtatgaaagatgaagcagaagcaccgaccgcgcccaagaataaccagacaattgctgttcttacaacttctctgagctcctggtacagtgatcagatccagaagaagtacagtgagcacccaacagtcgatggaaccagggtagaagtataccagccgagccatgaggagtaccagagatcaaagaacaagaagcacaacatgaaagcactggccgagatctacctactcagcatgacggacgtgctcatcaccagtggcttctccaccttcggctacgccgcgcagggcctctccggcctgacgccgtggatcatgttcaggtcggagaaccacgccatgccggacccgccgtgccgccgcgccatgtcgatcgagccgtgcttccatcaggctcccttctacgactgcaaggcgaagaggaacgctgacctgggcaagatggtgccgttcgtgaggcactgcgaggacgtcagttggggcctgaaggttgtaaatcaaactcagtggtagctgtaaatttgtcgtttgctcgttaactagggaagattttttttctttgtccaaaaggactacacagattcattctttactccacatatatttgatccaaatgtagataactgaagaacaaaatagcagtaaagttgtgtgttacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0763900, RefSeq:Os02g0763900