Os10g0447100

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0447100| Description = Similar to Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19) (Ubiquitin- protein ligase 5) (Ubiquitin carrier pro...")
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Gene Name

Os10g0447100

Description

Similar to Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19) (Ubiquitin- protein ligase 5) (Ubiquitin carrier protein 5)

Version

NM_001071254.1 GI:115482251 GeneID:4348755

Length

4095 bp

Definition

Oryza sativa Japonica Group Os10g0447100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16638047..16642141

Sequence Coding Region

16638251..16638294,16638476..16638555,16638868..16638982,16639076..16639128,16639228..16639370

Expression

GEO Profiles:Os10g0447100

Genome Context

<gbrowseImage1> name=NC_008403:16638047..16642141 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16638047..16642141 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttccccgagcaagcgccgcgagatggacttgatgaagctgatgatgagcgactacaaggtggagatggtgaacgatgggatgcaggagttcttcgtggaattccgggggcctactgaaagtatttatcaaggtggtgtctggaaggttagagtagaattgcctgatgcatatccttacaaatctccgtcgattggtttcgttaacaagatttatcatcctaatgtggatgaaatgtctggttctgtgtgtttggatgtcattaaccagacgtggagcccaatgtttgatctagttaatgtgttcgaagtcttccttccacaacttctattgtacccaaatccttctgacccattaaatggagaggctgctgcactgatgatgcgtgatcgtcctgcttatgaacaaaaagtgaaaggtgatgtggtttaa</cdnaseq>

Protein Sequence

<aaseq>MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFFVEFRGPTESIY QGGVWKVRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNV FEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQKVKGDVV</aaseq>

Gene Sequence

<dnaseqindica>205..248#430..509#822..936#1030..1082#1182..1324#ggaggaggagaggagaggagggcgcacgcaccacaccaccaccaccgtcacaagcaccgcaatctctttctccctttttcttcttctttctttctttctttcttccccttatccccaagaaccgcgtctctcaagaggtggggagaggaggaggaggaggagaaaaagaaatccaatctttttcttttttcttcttgtgtcaagatgtcttccccgagcaagcgccgcgagatggacttgatgaagctgtgaggatcttgtcctttatttatttattttttttggggggggggggggtggaattgtgtttttgcccggtttgattcttttctttctattggtggtctccatcgtctaatctgatgtgttgttgtttgttgttttgggggtggggggattggggattttcttggtttcttgttgttgcaggatgatgagcgactacaaggtggagatggtgaacgatgggatgcaggagttcttcgtggaattccgggggcctactgaaagtacgatcgcgcacgcaaattccgattttgtttttcctcctcctggttcctggcctgatgatccgcgtttcttgttttccggtctctgatctagatgtaggggaaatagtagaggaaagaattgggaaattttgactgttgatcatgtgcccattctgttggcatttactggtgaagcgtaggattctagggctgctcttgctgatgctggatgaattttgcctgcttgttcagttgaccaggagtagtcttgtttcagtgactggggaagagaagatatggagtctgatgaatgtttgcttaatttggcaggtatttatcaaggtggtgtctggaaggttagagtagaattgcctgatgcatatccttacaaatctccgtcgattggtttcgttaacaagatttatcatcctaatgtggatgaaatgtgaggatttgatgtccatacccttttctggaatgattgaagcttgtgtaatcaattgttgctgacctgcttttgttggacttgaaaatgtaggtctggttctgtgtgtttggatgtcattaaccagacgtggagcccaatgtttggtgagataactctcgtccttgtcattattagtacgggtacttgctgtttattctagcttctataaccctgggttgaatatttccatgaatttttggcagatctagttaatgtgttcgaagtcttccttccacaacttctattgtacccaaatccttctgacccattaaatggagaggctgctgcactgatgatgcgtgatcgtcctgcttatgaacaaaaagtgaaaggtgatgtggtttaaagccattgaactaattattgtttctgcctagtcttagactattgtttggtttaactgtcttgtccataacattttgccacaaattcaagccttaatattatgatgccacaatgcatttttgcaagattggctcacagttttgttttatcctacttccttcattagcgtggcagcaaccaattattggtatgaaggtgtccaatggttgtcctacttatctttattctaacatagtagcaagccctttagtttctctgctttagaatcagtattctcgtgtagttgggtgctttctaaccaggatgtatatgcacttaatcttacctgtgaattaggtttttattagtttagtgatggaacattaaggtgctttgtcataattgtcgacttccttttttttttgggggttagaagccttactagatctttttttgatagttcttattggaaggaggtcaatttgaaattgaaatagcctgccagagtcttttttttggggggttattcagagtcaatagttctgtcatgatctctcaatgatcctatgttctgtggcaaaaccatgtctgccattctgaaaattagcctttgtttgtatataatggcatgacttgtttcattatgctcaagaatggaataaatgcttgctgttggtttgtttccatgtgttatgttacactgggaatcttctttcttttttcgtgtcatgtttatgagatgtttgactatgtgaggtattccagtatttgtggctggaggcagttttctatttgaaaaggctctttctgtatctctataagttcccttttttgtaggtaattaccattttaaagctttttctagtgtatcctaattattattttttaccggagaagaactatcagcgtattggactgtttatttatagcatttgtgttgaagatctaattgtaatgattaactcttatgttacaacttcaggtgctgctaatattgctgattttatattttctaattttatttccatatcagaagtcagattatgtgattattatagttgtgccatgctaatgttggagaacttcattagttgatgttttactgattatcaaggagtatattttgattgtgcatgtgattcttatttgccatcctaggtactggttagtggtgtagtgtgcaccaatcttgtaaaaagtagctaaggacacataaagaaagaggacgagtgaaactattactacttgtcaaaaccattgcagacattatttgcttcataaaccagctaatttagcctgatttcaatttgttgattaataaataaatctgtccaccattcatacatagtctatgcattattgtcagtccagtagctgccagttactataggccttgttcatcatcggcgtagataataaatactaaggtctctgcgaagtaaaatatcagaattgaaatgggaaacatgcttgaggacctcttgaaattgttccttcttgtgctcttagccttttatgttgttttgctgccaactcaggggttgtctttttcatttcttaaaccctgctctacaccaaactgccgattttgatgattatatcaccagaggcttacagtgtgcatttggaggttggttccataggaataaggacaacattccatattatttctcatcaaagatagcaccgatgactcatcggacagtagcatccgcaacttagggtatgattggttgccattttataggatctgggctgagacatgcctggctggtgggatgcaaggggttggtgtttgattgtggatttgtggtttccctgagtggagattctgtttggttggttcatggggtgcttgattgcgtgtatagacgaggatgatttaaaaaatgttatcaggacttctattttgtgttaatatactatgaagcccatatcttattttaataagccttaatccacttgtaaatacactgatttcatttgctatgcactaactacttgctaattgcgtcattagccggcccgtgcctcgaaagggaatcttgcctagctgctttataacaaaattaaacaaggaactggtgcatcttattggcatggcacaacccctatgcaggcagaataacacatttcttgatccttgagcactcagcctcagatgtattgccaggaactgctagctttgaccacggttttagatagcacagctcacccggcattggtttctattatcgttatagtacaactaatacttttctttctctttatacttgatttcattaagtatgggttgacacttcatattctttcttggtcaaataaaactgcactgttgcgtttctcccacgcgataccagaagctcactcgctttccttttgcttgtgcagaatattgcgaaaaatatgcaaagcccgaggatgctggcgtaacccccgaagataagtcgagtgatgaagaacttagtgaagatgaagatgactccggggatgatgctatactcggcaacccagatccttagtcaagtctggaaccagtttccaaaagctcatcatatacaatgtttggtttgcagaaattgcaagcaaacaaaacatgaaaaaatatctgggaaaaaaaaggctctttgaatctctcatgtaaataagtgtacttgtatcttgtccaatgttgtttccttcaattgaccaattgaattcgcagcagctctcatgttttcccaatctgtcaaagtgtcaagcttgtagatttgtgctcgttccagggaataaacaaggttgtagcttctggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0447100, RefSeq:Os10g0447100