Os02g0766900

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Revision as of 02:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0766900| Description = Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78)| Version = NM_001054761.2 GI:297599962 GeneID:4330...")
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Gene Name

Os02g0766900

Description

Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78)

Version

NM_001054761.2 GI:297599962 GeneID:4330839

Length

1631 bp

Definition

Oryza sativa Japonica Group Os02g0766900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33170846..33172476

Sequence Coding Region

33170846..33171206,33171289..33171485,33171592..33171714,33171846..33172034,33172123..33172476

Expression

GEO Profiles:Os02g0766900

Genome Context

<gbrowseImage1> name=NC_008395:33170846..33172476 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33170846..33172476 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcaaacggcgagtaatcttgctgccaactttgggcgtcgtcgtcctggccatcgcggcagccgtcctcttgcacgccggcgaggcggccgacgtcgccaacgggcaattcgcgagggcgagcgggacgcggttcacggtgggtggccggccgttctactcgaacggcttcaacgcgtactggctcatgtacatggcgtccgaccccggcgaccggagcaaggcggccggcgtcctccagcaggcggcgagcctccgcgcgacgctggtgaggacgtgggcgttcagcgacggcggctaccggccgctgcagaagtcccccggcgtgtacaacgaggacatgttcatgggactagattttgtgatagccgaagcgaagaaacgagggctgtatctgatactgagcctggtgaacaactgggacggattcggcgggaagaagcagtacgtgcagtgggctagggatcagggacacaacctgggctctgacgacgacttcttccggagcgacgtgaccaaacagttctacaaaaaccatgccgtcctgaccagagtgaacaagataaccggagtggcgtacaaggacgatccgaccatctttgcatgggagctcatcaacgagcctcgctgccagagcgacctctccggaaaaacacttcaggcttgggtcacggagatggccgggtacgtgaaatccgtggatccgaaccacatggtggagatcgggctggaagggttctacggcgagtcgatgcacaagaacttcaacccgggctacaccgtcggcaccgacttcatcgccaacaacctcgtccccgctgtcgacttcgccacgatccactcctaccccgaccaatgggtgtccggcgcgagcagcgacgagcaggtggcgttcatgaggaagtggatggccgaccacatccgcgactcggcggcggtgctccggaagccgctgctggtgacggagttcgggtggtcggcgaggtcgaacgggtacacggtggcggcgcgggacgcctacttccgcacggtgtacgacgcggtgtacgcgtcggcgcgggagggcggcgcgtgcgccggtggcctcttctggcaggtgatggcgcccgggatggagagctggaccgacggctacgaggtggtgctcgagcgcagcaagtctacggccgacgtcgtcgctcaccagtgcgccaggatcgccggactcagcccggcctag</cdnaseq>

Protein Sequence

<aaseq>MGSKRRVILLPTLGVVVLAIAAAVLLHAGEAADVANGQFARASG TRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGY RPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGH NLGSDDDFFRSDVTKQFYKNHAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSG KTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHKNFNPGYTVGTDFIANNLVPAV DFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGY TVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSKSTAD VVAHQCARIAGLSPA</aaseq>

Gene Sequence

<dnaseqindica>1271..1631#992..1188#763..885#443..631#1..354#atggggagcaaacggcgagtaatcttgctgccaactttgggcgtcgtcgtcctggccatcgcggcagccgtcctcttgcacgccggcgaggcggccgacgtcgccaacgggcaattcgcgagggcgagcgggacgcggttcacggtgggtggccggccgttctactcgaacggcttcaacgcgtactggctcatgtacatggcgtccgaccccggcgaccggagcaaggcggccggcgtcctccagcaggcggcgagcctccgcgcgacgctggtgaggacgtgggcgttcagcgacggcggctaccggccgctgcagaagtcccccggcgtgtacaacgaggacatgttcatggtatcgttgcgtacgtgttgtgtacaccatgcatgcgtacgtacgtaatggtgacaattttggataacaatgttgtcgtgtgattcagggactagattttgtgatagccgaagcgaagaaacgagggctgtatctgatactgagcctggtgaacaactgggacggattcggcgggaagaagcagtacgtgcagtgggctagggatcagggacacaacctgggctctgacgacgacttcttccggagcgacgtgaccaaacagttctacaaaaaccatgtcaaggcacgagctaacatccgatacgctgacagtttataacctgaaaaaaagagaggaaaaaacatatctgacagtaaaaaacgtcctcgattagtcgatttgacgttctgctcgcatgcatgcaacaggccgtcctgaccagagtgaacaagataaccggagtggcgtacaaggacgatccgaccatctttgcatgggagctcatcaacgagcctcgctgccagagcgacctctccggaaaaacacttcaggtaaacaaaactcagttttaaccctcgtttaattcgtcaccggcccgatcacgccatgtgttgcaagatgtactaatttgtgatcgtttgatcaatgtgcttgcaggcttgggtcacggagatggccgggtacgtgaaatccgtggatccgaaccacatggtggagatcgggctggaagggttctacggcgagtcgatgcacaagaacttcaacccgggctacaccgtcggcaccgacttcatcgccaacaacctcgtccccgctgtcgacttcgccacgatccactcctaccccgaccaatggtatagcacacgaatgacaaattaatccatccatccagtgtgatatggttaatttaactggtgaaaaatcatattgcggcagggtgtccggcgcgagcagcgacgagcaggtggcgttcatgaggaagtggatggccgaccacatccgcgactcggcggcggtgctccggaagccgctgctggtgacggagttcgggtggtcggcgaggtcgaacgggtacacggtggcggcgcgggacgcctacttccgcacggtgtacgacgcggtgtacgcgtcggcgcgggagggcggcgcgtgcgccggtggcctcttctggcaggtgatggcgcccgggatggagagctggaccgacggctacgaggtggtgctcgagcgcagcaagtctacggccgacgtcgtcgctcaccagtgcgccaggatcgccggactcagcccggcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0766900, RefSeq:Os02g0766900