Os02g0767400

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Revision as of 02:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0767400| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001054766.1 GI:115448902 GeneID:433084...")
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Gene Name

Os02g0767400

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001054766.1 GI:115448902 GeneID:4330844

Length

3040 bp

Definition

Oryza sativa Japonica Group Os02g0767400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33199814..33202853

Sequence Coding Region

33199997..33202714

Expression

GEO Profiles:Os02g0767400

Genome Context

<gbrowseImage1> name=NC_008395:33199814..33202853 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33199814..33202853 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgctcgccaccgtcgatgcggcggcatccgctgctccctctcctcgccgccgtccttgtcggcgccgccgtccgcgccgggaagatcgccacggaggtggtcgtgccggacttcgtggcgtcgtacctgctgttcattgacacctacggcgtgttcctccagtccggcggcggcggcgcgttccaggccgtcgtgtacaacccggcggggcagcaggaccggtactacctcgccgtggtgcacgcgccgtccaagacctgcgtctgggtcgccaaccgcgacgcgcccatcaccgaccgcgccgcgccgctgcggctcacggcgagggggatctccgccgaggatcccaacgggaccgtcgtgtggtcgacgccggcgttcgcgtcccccgtggcggcgctccggctcgacgaatccggcaacctcgcgctgctcgatgggaggaaccgcacgctctggcagtcgttcgaccggcccaccgacgtgctcgtgtcgccgcagcggctccccgtcgggggcttcttggcgtcggccgtgtcggactcggactacacggtgggcggctaccggctcgacgtgacggcggccgatgcggcgctgacatggaacgggtcactgtactggctcctgtccatcgacgtcaaatccaccagagatcgcgacggcgccgtggcgtctatggcggtgaacggcaccggcctgtaccttctcgccgcggacgacaccgtcctcatccagctccccttgccggacgccaagctgcgtatcgtcaagctgggcgtggaagggaagctggtcatcacaagctacgcttcggcgaacgccacgtcgccgtcgccgacggacgctgggttcgtcgcgccgaacagcgggtgcgacctgccgctctcctgcggcgcgctcgggttctgcgcgcccaacgggaacgcctccagctgcacgtgcccgccgctgttcgcgtcgtcgcatgacggtggctgcacaccggccgacggctccaaggcgatgaccgtcgcctcctgcggcggcgccggtggtgatgccgccccgacctcgtacatcagtctcggcaatggtgtcgcgtactacgccaataggttctcacggccagacatggtcggctccaacgggtcgtcgtgccaagcactctgctccggcaactgctcctgcctcggttacttctacgacgagtcgtccttgtcttgcttcttggtgcagcaccagatcggctccctggttaacgccaactcgaggcgaggcgacatggtcggtttcatcaaggtccagagctcgcagtcaccggggtcgccgagcggttcatcttccaacaacagcacgctcatcgccatcctcctgccgacgatcgtcgcgttcgtgctcgtcgtcgtcgtcggcgccgtcatcgtcgtgtcgtggcgcaagcaagagcggcgcgcggggaggcgggcctcgcgatccagggacgtgcagctccggcgccaccgctcgccggcgtccgactcggcgcaccttgtctacggcaacgacgacgacggcaacgacattgtgatccctggactcccgacccggttcacgcacgaggagatcgaggacatgaccaacagcttccgcatcaagatcggcgccggcgggttcggcgccgtgtacaaaggcgagctccccgacagctccgccgtggccgtgaagaagatcgaaggcgtcgggatgcagggcaagcgcgagttctgcacggagatcgccgtcatcggcaacatccgccacgtcaacctcgtccgcctccgcggcttctgcgtcgagggccagcgccgcctgctcgtgtacgagtacatgaaccgcggctcgctcgaccggacgctgttccggccggccgccggccagccgctcgagtggaaggagaggatggaggtggcgatcggcgcggcgagggggctcgcgtacctccacttcggctgcgaccagaggatcatccactgcgacgtcaagccggagaacatcctcctcgccgacggcggccaggtgaagattgccgacttcgggctcgcgaagctcctcacgccggagcagtcggggctcttcacgacgatgcgcggcacccgcgggtacctcgcgccggagtggctcaccaacacggcgatcaccgaccgcaccgacgtgtacagcttcgggatggtgctcctcgagctcgtgcgcggccgcaagaaccgcagcgagcacgtgagcgacggcgccggcgccgccaccggagacgactccaactcctcgaacgggacgacgggcagctcgtcgcgcggcgcccggagcgattacttcccgctcatggcgctggaggggcacgaggcggggcagtacgccgcgctggccgacccgcggctggaggggaaggtggtcgccggcgaggtggagagggtggtaaaggtggggctctgctgcctccacgaggacccgcagctgcggccgagcatggcgatggtggccggcatgctcgagggcaccatggaactgtgggagccacgcgtgcagtcgctcgggttcctccggctctacggccgggggttcgccggaccggccgacggctcgggcggcagcggcggcggcatcaagcaagccatggcgggttccaatggggaccacacaaggtcggggacgacgacggtgacgacgatgagcgggtggccgtcgtacatgtcgtcgtcgcagctctccggtccaagatag</cdnaseq>

Protein Sequence

<aaseq>MCSPPSMRRHPLLPLLAAVLVGAAVRAGKIATEVVVPDFVASYL LFIDTYGVFLQSGGGGAFQAVVYNPAGQQDRYYLAVVHAPSKTCVWVANRDAPITDRA APLRLTARGISAEDPNGTVVWSTPAFASPVAALRLDESGNLALLDGRNRTLWQSFDRP TDVLVSPQRLPVGGFLASAVSDSDYTVGGYRLDVTAADAALTWNGSLYWLLSIDVKST RDRDGAVASMAVNGTGLYLLAADDTVLIQLPLPDAKLRIVKLGVEGKLVITSYASANA TSPSPTDAGFVAPNSGCDLPLSCGALGFCAPNGNASSCTCPPLFASSHDGGCTPADGS KAMTVASCGGAGGDAAPTSYISLGNGVAYYANRFSRPDMVGSNGSSCQALCSGNCSCL GYFYDESSLSCFLVQHQIGSLVNANSRRGDMVGFIKVQSSQSPGSPSGSSSNNSTLIA ILLPTIVAFVLVVVVGAVIVVSWRKQERRAGRRASRSRDVQLRRHRSPASDSAHLVYG NDDDGNDIVIPGLPTRFTHEEIEDMTNSFRIKIGAGGFGAVYKGELPDSSAVAVKKIE GVGMQGKREFCTEIAVIGNIRHVNLVRLRGFCVEGQRRLLVYEYMNRGSLDRTLFRPA AGQPLEWKERMEVAIGAARGLAYLHFGCDQRIIHCDVKPENILLADGGQVKIADFGLA KLLTPEQSGLFTTMRGTRGYLAPEWLTNTAITDRTDVYSFGMVLLELVRGRKNRSEHV SDGAGAATGDDSNSSNGTTGSSSRGARSDYFPLMALEGHEAGQYAALADPRLEGKVVA GEVERVVKVGLCCLHEDPQLRPSMAMVAGMLEGTMELWEPRVQSLGFLRLYGRGFAGP ADGSGGSGGGIKQAMAGSNGDHTRSGTTTVTTMSGWPSYMSSSQLSGPR</aaseq>

Gene Sequence

<dnaseqindica>140..2857#agcgcggccaatggcgccacccgagtcaaccccctctcgcggcacaaacccacccaccccgcaatcgcaatgccatcgcgtcacgccgcctgccgctcccgcctcccccatgagatgacccctcccccgccgccgtcccatgtgctcgccaccgtcgatgcggcggcatccgctgctccctctcctcgccgccgtccttgtcggcgccgccgtccgcgccgggaagatcgccacggaggtggtcgtgccggacttcgtggcgtcgtacctgctgttcattgacacctacggcgtgttcctccagtccggcggcggcggcgcgttccaggccgtcgtgtacaacccggcggggcagcaggaccggtactacctcgccgtggtgcacgcgccgtccaagacctgcgtctgggtcgccaaccgcgacgcgcccatcaccgaccgcgccgcgccgctgcggctcacggcgagggggatctccgccgaggatcccaacgggaccgtcgtgtggtcgacgccggcgttcgcgtcccccgtggcggcgctccggctcgacgaatccggcaacctcgcgctgctcgatgggaggaaccgcacgctctggcagtcgttcgaccggcccaccgacgtgctcgtgtcgccgcagcggctccccgtcgggggcttcttggcgtcggccgtgtcggactcggactacacggtgggcggctaccggctcgacgtgacggcggccgatgcggcgctgacatggaacgggtcactgtactggctcctgtccatcgacgtcaaatccaccagagatcgcgacggcgccgtggcgtctatggcggtgaacggcaccggcctgtaccttctcgccgcggacgacaccgtcctcatccagctccccttgccggacgccaagctgcgtatcgtcaagctgggcgtggaagggaagctggtcatcacaagctacgcttcggcgaacgccacgtcgccgtcgccgacggacgctgggttcgtcgcgccgaacagcgggtgcgacctgccgctctcctgcggcgcgctcgggttctgcgcgcccaacgggaacgcctccagctgcacgtgcccgccgctgttcgcgtcgtcgcatgacggtggctgcacaccggccgacggctccaaggcgatgaccgtcgcctcctgcggcggcgccggtggtgatgccgccccgacctcgtacatcagtctcggcaatggtgtcgcgtactacgccaataggttctcacggccagacatggtcggctccaacgggtcgtcgtgccaagcactctgctccggcaactgctcctgcctcggttacttctacgacgagtcgtccttgtcttgcttcttggtgcagcaccagatcggctccctggttaacgccaactcgaggcgaggcgacatggtcggtttcatcaaggtccagagctcgcagtcaccggggtcgccgagcggttcatcttccaacaacagcacgctcatcgccatcctcctgccgacgatcgtcgcgttcgtgctcgtcgtcgtcgtcggcgccgtcatcgtcgtgtcgtggcgcaagcaagagcggcgcgcggggaggcgggcctcgcgatccagggacgtgcagctccggcgccaccgctcgccggcgtccgactcggcgcaccttgtctacggcaacgacgacgacggcaacgacattgtgatccctggactcccgacccggttcacgcacgaggagatcgaggacatgaccaacagcttccgcatcaagatcggcgccggcgggttcggcgccgtgtacaaaggcgagctccccgacagctccgccgtggccgtgaagaagatcgaaggcgtcgggatgcagggcaagcgcgagttctgcacggagatcgccgtcatcggcaacatccgccacgtcaacctcgtccgcctccgcggcttctgcgtcgagggccagcgccgcctgctcgtgtacgagtacatgaaccgcggctcgctcgaccggacgctgttccggccggccgccggccagccgctcgagtggaaggagaggatggaggtggcgatcggcgcggcgagggggctcgcgtacctccacttcggctgcgaccagaggatcatccactgcgacgtcaagccggagaacatcctcctcgccgacggcggccaggtgaagattgccgacttcgggctcgcgaagctcctcacgccggagcagtcggggctcttcacgacgatgcgcggcacccgcgggtacctcgcgccggagtggctcaccaacacggcgatcaccgaccgcaccgacgtgtacagcttcgggatggtgctcctcgagctcgtgcgcggccgcaagaaccgcagcgagcacgtgagcgacggcgccggcgccgccaccggagacgactccaactcctcgaacgggacgacgggcagctcgtcgcgcggcgcccggagcgattacttcccgctcatggcgctggaggggcacgaggcggggcagtacgccgcgctggccgacccgcggctggaggggaaggtggtcgccggcgaggtggagagggtggtaaaggtggggctctgctgcctccacgaggacccgcagctgcggccgagcatggcgatggtggccggcatgctcgagggcaccatggaactgtgggagccacgcgtgcagtcgctcgggttcctccggctctacggccgggggttcgccggaccggccgacggctcgggcggcagcggcggcggcatcaagcaagccatggcgggttccaatggggaccacacaaggtcggggacgacgacggtgacgacgatgagcgggtggccgtcgtacatgtcgtcgtcgcagctctccggtccaagatagggcggcgcacaccggcgagaagattgtgttgttagagatagattatacggttgcattgatcattttggttgatttgtaaacagagggattaatttgtgcattcgtgaggtctatacaaattttgtcctgttttcccatctgcttttctcaagaaaaatggaaggataagtgagtttttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0767400, RefSeq:Os02g0767400