Os10g0447300

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0447300| Description = Peptidase A1, pepsin family protein| Version = NM_001071256.2 GI:297610571 GeneID:4348757| Length = 969 bp| Definit...")
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Gene Name

Os10g0447300

Description

Peptidase A1, pepsin family protein

Version

NM_001071256.2 GI:297610571 GeneID:4348757

Length

969 bp

Definition

Oryza sativa Japonica Group Os10g0447300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16656469..16657437

Sequence Coding Region

16656469..16656532,16656599..16656951,16657387..16657437

Expression

GEO Profiles:Os10g0447300

Genome Context

<gbrowseImage1> name=NC_008403:16656469..16657437 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16656469..16657437 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcagcgtcaagttcggctgctccactgcgacgggccgactcgttcccgggcgacaggctgagattctcctacagtcgtactgcctcgtcccgcactccgtcaacacctcgtcggcgctcaacttcggtgccctcgccaacgtcaccgagcccggagcggcaagcacgccgctcgtcgttggggacgtggacacgtactacaccgtggtcctcgactccgtcaaggtcggcaacaagacggtggcgtcggcggcgagctcccgcatcatcgtggactccggcacgacgctgacattcctcgacccagctctgatgggaccacttgtcgacgagctctcccgctggatcacgctgccgccggtgcagtcgccggacgggctgctgcagctgtgctacgaggtggccgggcaggaggaagtgaaccgaacaggcgagtccggacttgacgctggagttcggacttga</cdnaseq>

Protein Sequence

<aaseq>MGSVKFGCSTATGRLVPGRQAEILLQSYCLVPHSVNTSSALNFG ALANVTEPGAASTPLVVGDVDTYYTVVLDSVKVGNKTVASAASSRIIVDSGTTLTFLD PALMGPLVDELSRWITLPPVQSPDGLLQLCYEVAGQEEVNRTGESGLDAGVRT</aaseq>

Gene Sequence

<dnaseqindica>1..64#131..483#919..969#atgggcagcgtcaagttcggctgctccactgcgacgggccgactcgttcccgggcgacaggctggtcgggctcggcggcggcgcggtctccctcgtgacgtagctcggcggcgcggcatcgctcggccagagattctcctacagtcgtactgcctcgtcccgcactccgtcaacacctcgtcggcgctcaacttcggtgccctcgccaacgtcaccgagcccggagcggcaagcacgccgctcgtcgttggggacgtggacacgtactacaccgtggtcctcgactccgtcaaggtcggcaacaagacggtggcgtcggcggcgagctcccgcatcatcgtggactccggcacgacgctgacattcctcgacccagctctgatgggaccacttgtcgacgagctctcccgctggatcacgctgccgccggtgcagtcgccggacgggctgctgcagctgtgctacgaggtggccgggcaggaggtggaagccggagagagaatcacaaatcacatcgataaacatctatactccatcgtggaatcttgttcagataatcacagtacttatgtagaaaggatagtaagatacagaaatgcaaaaataagctttgtaagtgaacagaacaatctcaagctaagctgttcttttatcagaagaacaggatttcaagatattttgtggcgccggtttcgctgtcttacctcgctatacattctgtgagagatcaaattacatgacccataaattgtagagcaatgcaggagtaacactcccagctgagaaattgattgatgtatagcactccgatcttcgttaggcgatgcaatgagaattcagaattctcaccaacagccagcttgctagaatagagtatgagttactgatcttgaatgacctcttgtgtacagccagcaggaagtgaaccgaacaggcgagtccggacttgacgctggagttcggacttga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0447300, RefSeq:Os10g0447300