Os02g0769200

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Revision as of 02:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0769200| Description = Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2| Version = NM_001054777.1 GI:115448924 Gene...")
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Gene Name

Os02g0769200

Description

Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2

Version

NM_001054777.1 GI:115448924 GeneID:4330856

Length

3026 bp

Definition

Oryza sativa Japonica Group Os02g0769200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33313234..33316259

Sequence Coding Region

33315339..33316103

Expression

GEO Profiles:Os02g0769200

Genome Context

<gbrowseImage1> name=NC_008395:33313234..33316259 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33313234..33316259 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggggtgtgtggctccgtcgcggcggcggcggcgatggtcgtggttgtgatggtgtcgtcgttgccgggcggcgtggaggcgaagacgacgatcgagccgtgcacggggtcggactcgtgctcggcgctgctgggctacacgctctacgccgacatgaaggtgtcggaggtggccgcgctgttcggcacggacccggcggcgctgctggccgccaacgcgctggactttggggcgccgggggcggcgcaccgcatcctcccgatgggcctcttcgtccgcgtccccacccgctgctcctgcaccgacggcgtccgcaagtcggtctccgtgcgctacgccgcgcgccccgccgacacgctcgccaccgtcgccgacggcgtcttcgcggggctcgccttcgccgaccagatccgcaacgccaacgccgtcgcatccgcggaccccgacgcgccgcttgaccccggccagaagctcgtcgtcccgctgccctgcgtctgcttcaactcctccgacaacaacctgcccgccgtgtacctctcctacgtcgtgcaggtcggggacaccgtgcccgccatcgccgccagctacgagaccaccgtcacggatgtcatgaatgtgaacgccatgggaagcccgatcgccgcgccgggcgacattctcgccatcccattgccaggtacatgttcatctcaaactttgcaaacgatatcgcagatgagccgtatggtttattgcattgagctaactgttttgagctaa</cdnaseq>

Protein Sequence

<aaseq>MAGVCGSVAAAAAMVVVVMVSSLPGGVEAKTTIEPCTGSDSCSA LLGYTLYADMKVSEVAALFGTDPAALLAANALDFGAPGAAHRILPMGLFVRVPTRCSC TDGVRKSVSVRYAARPADTLATVADGVFAGLAFADQIRNANAVASADPDAPLDPGQKL VVPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAMGSPIAAP GDILAIPLPGTCSSQTLQTISQMSRMVYCIELTVLS</aaseq>

Gene Sequence

<dnaseqindica>157..921#attactcacccagcaaccgactcgctcctccctttccgccgctgaccggtgggccatcccccccaccctcctcctctcagcttgtataccagcgcttccgcagagtcacgcactgcacagttgaagttggtggagtgtggagtggagtggagtggaatggcgggggtgtgtggctccgtcgcggcggcggcggcgatggtcgtggttgtgatggtgtcgtcgttgccgggcggcgtggaggcgaagacgacgatcgagccgtgcacggggtcggactcgtgctcggcgctgctgggctacacgctctacgccgacatgaaggtgtcggaggtggccgcgctgttcggcacggacccggcggcgctgctggccgccaacgcgctggactttggggcgccgggggcggcgcaccgcatcctcccgatgggcctcttcgtccgcgtccccacccgctgctcctgcaccgacggcgtccgcaagtcggtctccgtgcgctacgccgcgcgccccgccgacacgctcgccaccgtcgccgacggcgtcttcgcggggctcgccttcgccgaccagatccgcaacgccaacgccgtcgcatccgcggaccccgacgcgccgcttgaccccggccagaagctcgtcgtcccgctgccctgcgtctgcttcaactcctccgacaacaacctgcccgccgtgtacctctcctacgtcgtgcaggtcggggacaccgtgcccgccatcgccgccagctacgagaccaccgtcacggatgtcatgaatgtgaacgccatgggaagcccgatcgccgcgccgggcgacattctcgccatcccattgccaggtacatgttcatctcaaactttgcaaacgatatcgcagatgagccgtatggtttattgcattgagctaactgttttgagctaaaactttgcaaacgagcatattttctgcaggcaaattggttcgtcagtatgtttttgttctgaataaataataatcagacaatgcatcattggggatataaacagtatgcatgctagtggacattgcattggtgccttagctttaatatttgattgcttcataggctgcttatattctagggtttaattgattagtacagtaaagaaaatcacatcagtttaatgtcgggcttcaccatcttgctcgattttagtcttcctcatgttggtccgaactgaacatttgaaattatgaatctgtcgtcattacagtagcccaattactagctgcagtttgatgtttggtacttcctccgtttcataatataagtctttttagcattacacacattcatatagatgtttatcaatttaaacatatatgtgtgtctagattcattaacatctatatgaatgtggccaatgctagaaagtcttatattatgaaacggaaggagtatatgcgatgtttcaattcgctaacatcggagtcagataaatagaactttgtttaggcaatcgattactcttcaataggaattaggaagatactattggagagttatgcacgaactgttcagttttcctttctattcattcagtgagtttcagattgtgtatcctgtaagaaaacataagcatcatattatgatgagcctctgcgtttatggactctatcttttgttgattgctaattcttctgttctgccttctgtgacaacagttgggctgcatcatttatcttttctaaatatcagcattttctccctagttcttccagtgacaattgttgcttgtttctgtatcttagcatgtacatctgcatttcccaaatctgcttcagaccatggactaattgtggcaaatgggacttatgcacttactgctggaaactgtgtgcagtgtagttgcgggccagggaatctcaagtaattttcagattgtaccttttctgtttaacacgatattatatggaaccattatttgggtcgtaatgtctgtcttctcttctgtctcagtttatattgcacaccagcttcattgacagggtcatgtccaagcatgcagtgcagtaacagcaatgttctgctaggtaatgtaagcgctcgttccaccagtgcaggctgcaatgtttcttcttgtagctacggaggttttgttaatggaaccattaccacattgtaagtaacatgttgctcagagtctctgttttttctacttctactatcaagttgttacattctaccttcctttgcaggctgagcacaggtcttcaatccagatgtccaggtaattactgttgctgtgagcttgtggcctgcaactggcttacaatgcagcaatatcgtgcatttgaatttcaatctgcctcagatgttagtatttttcaggtttttgaactggaaaagcatgcatccttttttattaaaaaaaacagtagtaagttgcatcaacagaattaacatcccacctgaatagttgcaaaaattgcactttgtcactttgaattccagagcaacctgcatcatactttgcgaatgaatacattcataccttcgctttggctgagcagcaattgttcgttctatgattacaagttctttaactcggctcttttagtcagcattgccacttttactttgatacatgtccactgttttttattcttcttctgcacgcaggaccacatcagttccctgaactcactgaaccccctaccacggtgaaccatgattcaacgtttctcccgccattatcggcacctggacctgcagaagccggcggcgccattccccctccgaactcaggctcaccatcagtgcaaggagggtctttcacactgcccaaagtatccactgcaaatggccctgccggaagcgtttcagaggctccttggatgaacaagccgcatcagatcctgtcaagtttcatcttgtgtctactacttctctactcgcagatgtgaattgcaatgtgtagtcaaggaccaattctgtagtaattgtaaacttgaagcctcatttaggcaaggggaggtggacagtatcatatcggcgatgtttttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0769200, RefSeq:Os02g0769200