Os02g0772000

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Revision as of 02:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0772000| Description = NGN domain containing protein| Version = NM_001186230.1 GI:297721592 GeneID:9267296| Length = 6806 bp| Definition =...")
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Gene Name

Os02g0772000

Description

NGN domain containing protein

Version

NM_001186230.1 GI:297721592 GeneID:9267296

Length

6806 bp

Definition

Oryza sativa Japonica Group Os02g0772000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33471428..33478233

Sequence Coding Region

33471428..33471755,33472716..33472957,33473049..33473192,33473257..33473418,33473497..33473580
,33473896..33473969,33474077..33474407,33474488..33474643,33474736..33474833
,33475344..33475470,33475561..33475660,33475770..33475940,33476158..33476206
,33476280..33476371,33477073..33477142,33477269..33477317,33477427..33477661
,33477793..33477893,33477982..33478233

Expression

GEO Profiles:Os02g0772000

Genome Context

<gbrowseImage1> name=NC_008395:33471428..33478233 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33471428..33478233 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcgcggcagccgcgaggaggaggatgaagaggaggtgtacgactcggaggaagaggaggaggaggagggggaggtggaggagaggggcggaaagcggtcacgcgggggcggcggcggcgggaagtggtccggcgtagagagcttcatcgacgacgcggccagtgaggatgaggatgaggaggaggaggaggatgacgacgaggactacgtgggtggcggcggcggccgtgcccgcaagaggaagagggcgtccatcctgatcgacgatatggctcaggtcgacgatgaagaggaggaggaggaggatggcgagttcgaggacggctttattgatgatactcgagctgacgaccctgaccaagatgtgggaagaagctctagacggcatccatcttctatgctggatgaagaggaggacgtggatgcacttgtgaagctaatacacgacaggtatataattccgtcatcacattttgtggatgatgacgatggtgtgactgaggttgaacagcaagctcttctgccatcggtgaaggatccaaagctttggatggtgaaatgtgcgattgggcatgaacgggagacagccatttgtttgatgcagaagtccattgatacgccagatctccagattaaatctgttcttgcattagatcacctgaagaattacatttatgtggaagcatataaagaagcccatgtcaaagaggcttgcaaaggtgtgcgcaatatcttcgcttcaagaaaagtaactctggtgcctataagagaggtggctgatgtactctctgttcagagcaagtctactgatatttcaattaacacatgggtccgaatgaagcttggtgcatataaaggggatcttgccaaggttgttgacgttgatgatgtgcatcaaaaggttactgtgaaactcattccaagaatagatttacaagccttggcaaacaaatttgatggacttaaggttgtgaaggagaagaaatcatttgttccaccaccaaagttatttagcgccaatgaggcaaggaggaatagagactctggggaatactatgaaatggttgatggtttaaaattcaaagatggtttcttgcacaaaacgttttcaataaagtcaataagcgcacacaatattcagccatcatttgatgaactggagaaattcagggaacctgataatgacataaatgaggatgcggccagcttgtccaccctatttacaaataggaaaaaagggcacttcatgaaaggtgattctgttattgttattaaaggtgatcttaagaacttagagggctatgttgagaaagcagaggatgccactgttcatatccgatcaaaattacctggtcttctgaacacacttgtcttcaatgagggggatctctgcaaatgtttcaatcctggagaccatgtaaaagtggtgtctggtgttcaagaaggtgcaacgggcttggtagttaaagttgaaggccatgttttgatcattttgtcggacacaactaaagagcatatccgtgtgttcgctgatcatgttgtggagagttctgaggtaaccactgggcttaccagaattggtgattatgaattgcatgatcttgtacttcttggggaaagcaagggtctgtggaacatatacacagaggagtactttttatttatgatcgtcaccaccttgaacattcaggctttatctgtgcaagcgcacaatcatgcctccttgttgggggatcaactgggtatgggtacagttgatccacgatttggtgcttttagatcttcagcaaggattttgcaatctccaggaaggctcccccctaaagcacctcatactaattatggcagacggtttggaggcagagatcatggtggcaaagggcatgataccctggtgaatagatgtatcaagattaaatctggcccctacaaaggatatcgtggtcgtgttaaagaaatgacgggagcacttgtacgcgtggagcttgattcacttatgaaggttgttgcagttaagagagaagatattgctgacacagctactgttgcaactccattcggtgaatctcataattcatggggcaacgaaacacctgtgcacccatctagaacgccactgcgtccttttcagactccattgcgggaccctggagcaacaccagttcctaatggaatgcgaactcctatgcctagtcgagcatgggcaccaatgagtccaccaaggaatggctgggaagatgctgtcacttgggaaagcagcccaacttaccaaccaggaactccagttccccagccacacgaagcccccacccctgggtcaggatgggctgttacacctggagttagtttcggtgatgcctccggaaaaaatccaagctcatatgcaactccaacacctagtgggcaaccaatgaccccaaatcctgcatcatatctcccgagcacacctggtggtcagcccatgactctgggttatattgaaatggatataatgtctcctgccataggtgaggagggcggtaggaactggcttttaccagatgttttggtcaatgtgctcagggaaggttatgataccacctgcggtgtggttaaggaagtcctcccggatggatcttgccgcgtcgcacttgggtcgtcaggcagcggggatgaaataactgcttttccaaacgagtttgaggttgtcaagcctaagaagaacgacaagctaaagataatgtctgggtcttggcgtggactcacggggaaattgctgggagtcgacggatctgatggcattgtgaaggtggatggtctagagacgacggatcagacgaaaattctagacacggcgattttgggcaagctagcagcctga</cdnaseq>

Protein Sequence

<aaseq>MSRGSREEEDEEEVYDSEEEEEEEGEVEERGGKRSRGGGGGGKW SGVESFIDDAASEDEDEEEEEDDDEDYVGGGGGRARKRKRASILIDDMAQVDDEEEEE EDGEFEDGFIDDTRADDPDQDVGRSSRRHPSSMLDEEEDVDALVKLIHDRYIIPSSHF VDDDDGVTEVEQQALLPSVKDPKLWMVKCAIGHERETAICLMQKSIDTPDLQIKSVLA LDHLKNYIYVEAYKEAHVKEACKGVRNIFASRKVTLVPIREVADVLSVQSKSTDISIN TWVRMKLGAYKGDLAKVVDVDDVHQKVTVKLIPRIDLQALANKFDGLKVVKEKKSFVP PPKLFSANEARRNRDSGEYYEMVDGLKFKDGFLHKTFSIKSISAHNIQPSFDELEKFR EPDNDINEDAASLSTLFTNRKKGHFMKGDSVIVIKGDLKNLEGYVEKAEDATVHIRSK LPGLLNTLVFNEGDLCKCFNPGDHVKVVSGVQEGATGLVVKVEGHVLIILSDTTKEHI RVFADHVVESSEVTTGLTRIGDYELHDLVLLGESKGLWNIYTEEYFLFMIVTTLNIQA LSVQAHNHASLLGDQLGMGTVDPRFGAFRSSARILQSPGRLPPKAPHTNYGRRFGGRD HGGKGHDTLVNRCIKIKSGPYKGYRGRVKEMTGALVRVELDSLMKVVAVKREDIADTA TVATPFGESHNSWGNETPVHPSRTPLRPFQTPLRDPGATPVPNGMRTPMPSRAWAPMS PPRNGWEDAVTWESSPTYQPGTPVPQPHEAPTPGSGWAVTPGVSFGDASGKNPSSYAT PTPSGQPMTPNPASYLPSTPGGQPMTLGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLR EGYDTTCGVVKEVLPDGSCRVALGSSGSGDEITAFPNEFEVVKPKKNDKLKIMSGSWR GLTGKLLGVDGSDGIVKVDGLETTDQTKILDTAILGKLAA</aaseq>

Gene Sequence

<dnaseqindica>1..328#1289..1530#1622..1765#1830..1991#2070..2153#2469..2542#2650..2980#3061..3216#3309..3406#3917..4043#4134..4233#4343..4513#4731..4779#4853..4944#5646..5715#5842..5890#6000..6234#6366..6466#6555..6806#atgtcgcgcggcagccgcgaggaggaggatgaagaggaggtgtacgactcggaggaagaggaggaggaggagggggaggtggaggagaggggcggaaagcggtcacgcgggggcggcggcggcgggaagtggtccggcgtagagagcttcatcgacgacgcggccagtgaggatgaggatgaggaggaggaggaggatgacgacgaggactacgtgggtggcggcggcggccgtgcccgcaagaggaagagggcgtccatcctgatcgacgatatggctcaggtcgacgatgaagaggaggaggaggaggatggcgagttcgaggacggtgagtgcttcctggtggtctcactggtgtttgaactgtgaatccgtgatagaatcgttagattgatttcccaaatccgaaattacgaagcacagcgaaatcagcaatttcgtttcggtttctgctagctgagtcattggacgtagaatttgtgtttgttaattaagcgctaagttgagcgaaccaacaatttcaatgctagttccttcccggttaccctggataatcaactctgttcgaaatggtccaggtgtagattcattaaatttggtggtcaatttcgtattgattccatgttgttgcagttctatggttgtttgtggtggtttagtctcatctaatggcaataagaatcgagatttctgtttagcgatatgtgaaaacttcagttggaggcaaaagtttatattcattccgggatttttgtcataaattgggcagatttgctaggacaaaagtagttccgtcaaactaactcgacaccaattaggccttcaccaaccaagaagttaactgggcgagtgggcgtagttcattcaatcatctctatttaaagccacgttgccttgaatggcaggactctgcgacatgccaatatgatggactgaatttgctgctactacctattatcaatgttcaaagttgtctgaatacgctgatggcctgatggctgttctatgttattgtgatagatctgttaaaaaatcttcgtttcaaatgtgaaacctaattggaagatgctcctactctttgtttcgaatgcggcacagggaagatgctccaattaattcataaactaactaagctgtttacttgtgctgactactaacatgtgttaccttccttttggtattatcagattcacattgtcaaaatatatcttgtgttgaattatataatatccaaaagcaagttcaagtgttttaatgctgtcagctatggtccttcatgttttggtaggctttattgatgatactcgagctgacgaccctgaccaagatgtgggaagaagctctagacggcatccatcttctatgctggatgaagaggaggacgtggatgcacttgtgaagctaatacacgacaggtatataattccgtcatcacattttgtggatgatgacgatggtgtgactgaggttgaacagcaagctcttctgccatcggtgaaggatccaaagctttggatggtgaaatgtgcggtatgttgcaggttctatcgaataatgttctgctccacaatttgttttctgtataatttgatgctcactgatatccaattatgattttcagattgggcatgaacgggagacagccatttgtttgatgcagaagtccattgatacgccagatctccagattaaatctgttcttgcattagatcacctgaagaattacatttatgtggaagcatataaagaagcccatgtcaaagaggtacggtgcttgacctgacattgtaatattcctgctatgtgatgggaactaaaatttattacaggcttgcaaaggtgtgcgcaatatcttcgcttcaagaaaagtaactctggtgcctataagagaggtggctgatgtactctctgttcagagcaagtctactgatatttcaattaacacatgggtccgaatgaagcttggtgcatataaaggggatcttgccaaggtatggccatcaccacggcagtacagtttcttcatgctaacattttctgctactatttgattttatgacctccatcaggttgttgacgttgatgatgtgcatcaaaaggttactgtgaaactcattccaagaatagatttacaagccttggcaaacaaatttgtaagttgttacttggtataaattgccacgttttatgttcacctttcagcctaacatgccctgttatatttgtggtgatgcatctgctgttaatacattacctttttaggttgttgctgccatcatttggtatgatgttaggatttcctatctgatgtgattcactgaatgccagatgtattaatttatagtggaacaagtgaccatttgagtaaattgaaaattaaaaatctgtacgtagtccgtggtcatctgcatgctattatcctttgccagtgccgatgggctagcatgatcagtatttcccattttcaggatggacttaaggttgtgaaggagaagaaatcatttgttccaccaccaaagttatttagcgccaatgaggcaaggtgctttttcctccgtttgtaatcagtatgtattcatatatatttgtattgctgcaatctgctaactcgattgtaaataaggagatgaacattcgtgttgaccggaggaggaatagagactctggggaatactatgaaatggttgatggtttaaaattcaaagatggtttcttgcacaaaacgttttcaataaagtcaataagcgcacacaatattcagccatcatttgatgaactggagaaattcagggaacctgataatgacataaatgaggatgcggccagcttgtccaccctatttacaaataggaaaaaagggcacttcatgaaaggtgattctgttattgttattaaaggtgatcttaagaacttagagggctatgttgagaaagcagaggatgccactgttcatatccgatcaaaattacctggtcttctggtaattacttgcaaaaggaattttcatgtcattttcaatgtagccattacgaatttatacatctctttgtgtacctgcagaacacacttgtcttcaatgagggggatctctgcaaatgtttcaatcctggagaccatgtaaaagtggtgtctggtgttcaagaaggtgcaacgggcttggtagttaaagttgaaggccatgttttgatcattttgtcggacacaactaaagagcatgtgagggaattttcgtggacataagtataagaaactatttggataaacttccattatgcttttgactttctgatgtgtttatatgattacagatccgtgtgttcgctgatcatgttgtggagagttctgaggtaaccactgggcttaccagaattggtgattatgaattgcatgatcttgtacttcttgggtaagctcagaatttctaatgagccattgttgttgcttacaacattgaacggctatgtaataacaatgttcctcccattcaattttcagaaacttatcttttggtgttattataaaggtggaaaaagaagcacttcaggcaagaaaatttgtatagaacatttcacgtatgcctaatgatcttttgttcccatattttttgtgtactaacccccaaaatgcatttagattctcaagggagagcctgacaaacctgaactagttcttgtgaaactcagagaaataaaaagcaagatttatcggcgaacatctgcaaaagatcggtccagtaatatcgtgtcaacaaaggatgtcgttagggtcattgaaggagcttgtaaagtgtgtacagtttattttatttgtttttagcttttcatattatattctgttttagttttttttctgtcagaatatatgtttattacattatcccattatactatatgtctaatacactttgtcacaacagggaaagcaagggtctgtggaacatatacacagaggagtactttttatttatgatcgtcaccaccttgaacattcaggctttatctgtgcaagcgcacaatcatgcctccttgttgggggatcaactggtagccgccgcggaaatgtatgtttgaagctatttacctctgttggttgtcttggaagattttcctaaccattttgcttctctgatacagggtatgggtacagttgatccacgatttggtgcttttagatcttcagcaaggattttgcaatctccaggaaggctcccccctaaagcacctcatactaattgtatgaatattatctgcacagctccttgttttttttttatttaggctgcattgctctgctaaatgcaatagcaataccaattcataattgtccttcctatctaatgcagatggcagacggtttggaggcagagatcatggtggcaaagggcatgataccctggtgaatagatgtatcaagattaaatctggcccctacaaaggatatcgtggtcgtgttaaagaaatgacgggagcacttgtacgcgtggagcttgattcacttatgaaggttgttgcaggtgaatctttgttgtcatttgttctatttttggtgggaactttgcgcgcatttgtattaagaagggaagcaaaaaccaataaaaggagatcaacgagtacacctcttcatgcagcaatcgctgcggacacactacaactttcattcctgagctgcattccttccaaatccccactatttcttctgatttttaaaactatcttgcttcaaatatgtagttaagagagaagatattgctgacacagctactgttgcaactccattcgggtaaatttcttcctccttgtccgtatatttggaaagctgtttgatttcatttaatgactacttgtatcgacagtgaatctcataattcatggggcaacgaaacacctgtgcacccatctagaacgccactgcgtccttttcagactccattgcgggaccctggaggtgtgtccatcttacatgcattatggttattataaaaattaagacagctaagatcacttatttgttccttccgtttacaaatatgtagttttggacataaccgaagcaactttgactgctaaatatcagaatatgtttactaagaagtaacaaaaatgttgtattatgatcccaatgtagctattttgggtcctaagagactgggaggtttatctataatgtcataaatgtaaagtggagagaagtactaattccatggcactactttgtagttttgttttctttatgtcatctactcaatatgtaaaaaattaatgcggatagactttgctacttagtacttgagtactcagatggtgatggaagatttatatggaggctagtgcatctgtactgtttagcagcataatcaatggctatcatttctctactgtttaatcaacttaaactatatgagtagtcacctctttgtatcttgattggtgttgttttttggagggagcctttcctctcctgaatgcttatcaggaagcacttcgaaatgggtgtgatagatgtaattcagatgaacgatgtaaaatttgactggcgttgtgtcgttggccaaacgaaaatattatgcagttcatgctataaatggtatttactttctctctctctcttgcacacacacatattaacaaggtgttcgtcttttacagcaacaccagttcctaatggaatgcgaactcctatgcctagtcgagcatgggcaccaatgagtccaccaaggtttgtatgctgacattatgtgcaatttagttttataatgaaaatgaattatgttgtgcaagcgagctaattctagtataagtttattttatatagatttgttgttgactaattcaattattacaggaatggctgggaagatgctgtcacttgggaaagcagcccaacttaccaagttcgtcatgcacttatgctatttcttgactgctctttattttctgtagattagctttgggttggcaatcaatggtaagtttttgagcctctacatttcacttttgcagccaggaactccagttccccagccacacgaagcccccacccctgggtcaggatgggctgttacacctggagttagtttcggtgatgcctccggaaaaaatccaagctcatatgcaactccaacacctagtgggcaaccaatgaccccaaatcctgcatcatatctcccgagcacacctggtggtcagcccatgactctgggttatattgaaatggatataatgtctcctgccataggtaatatttttatccttcgaattcgttgcttctccagcaaaatgcattctacagtcaatctggatggtgatcgaaactatctagagctctggatgcacttatttgggtactaattcccaaactgctttcaggtgaggagggcggtaggaactggcttttaccagatgttttggtcaatgtgctcagggaaggttatgataccacctgcggtgtggttaaggaagtcctcccggtgcgtactatttttacatctacaagatgacccccctaattcttctttcactttcctacactgacacatccttgaatttaaactctaggatggatcttgccgcgtcgcacttgggtcgtcaggcagcggggatgaaataactgcttttccaaacgagtttgaggttgtcaagcctaagaagaacgacaagctaaagataatgtctgggtcttggcgtggactcacggggaaattgctgggagtcgacggatctgatggcattgtgaaggtggatggtctagagacgacggatcagacgaaaattctagacacggcgattttgggcaagctagcagcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0772000, RefSeq:Os02g0772000