Os09g0277800

From RiceWiki
Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0277800| Description = Similar to Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0277800

Description

Similar to Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase)

Version

NM_001069287.1 GI:115478313 GeneID:4346596

Length

4100 bp

Definition

Oryza sativa Japonica Group Os09g0277800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6347559..6351658

Sequence Coding Region

6348247..6348484,6348944..6349053,6349131..6349186,6349296..6349380,6349450..6349497
,6349623..6349697,6349793..6349904,6350350..6350401,6350479..6350530
,6350629..6350686,6350929..6351027,6351119..6351249

Expression

GEO Profiles:Os09g0277800

Genome Context

<gbrowseImage1> name=NC_008402:6347559..6351658 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6347559..6351658 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgcatcagtgactactggcttgcagatggcggcggcacgcccttgtatcccagcttgccaacgcctgctagggtcaagagcagcacttccttcatttggaagggcgcttagtacccaaactggcttcgcgagctgcagaaaaacagcatcagcagggccgtttgtttctctgaaccacaagaggtttgccgtgagggcgatgtctgcccagggactccccattgatctcagaggtaaaagagcatttattgctggagttgctgatgataatggctatggctgggcaatagcaaaagctcttgctgcagctggtgccgagattcttgttggtacatgggtacctgcactgaacatatttgagacaagcttgaggcgtgggaagtttgacgaatcacgaaagcttcctgatggatctcttatggagattacaaaagtctacccattggatgcagtttttgactctcctgaggatgttcctgatgatgttaaagcaaacaaaaggtatgctggatcttcaaactggactgttaaggaagttgctgaaactgtgaagaatgactttggtaccattgacatcctcgtacactctcttgcaaatggtcctgaggtaaaaaactctttgctggagacatcaagaaaagggtatcttgctgcagtttcagcatctagttactctttcatctctttactccaacacttccttcctataatgaatccagggggtgctactatatccttgacctacatagcttccgaaaggacaattcctggatacggtggcggcatgagctcagcaaaagcagcacttgagagtgatacaagagttctagcttacgaagcaggtcgaaaaggcaagatcagagtgaataccatatcagcaggtccattgggaagtcgagcagccaaagctattggtttcatcgagaagatgatagagtattcgtacgtgaacgcaccactgcagaaggagctcttggcagatgaagtggggaacacagcagcattcttagcatcgccgttggcatctgcaatcactggatcaactatctatgttgacaatgggctcaatacaatgggacttgcacttgacagccctacactatccacatag</cdnaseq>

Protein Sequence

<aaseq>MGASVTTGLQMAAARPCIPACQRLLGSRAALPSFGRALSTQTGF ASCRKTASAGPFVSLNHKRFAVRAMSAQGLPIDLRGKRAFIAGVADDNGYGWAIAKAL AAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDSPEDV PDDVKANKRYAGSSNWTVKEVAETVKNDFGTIDILVHSLANGPEVKNSLLETSRKGYL AAVSASSYSFISLLQHFLPIMNPGGATISLTYIASERTIPGYGGGMSSAKAALESDTR VLAYEAGRKGKIRVNTISAGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNT AAFLASPLASAITGSTIYVDNGLNTMGLALDSPTLST</aaseq>

Gene Sequence

<dnaseqindica>689..926#1386..1495#1573..1628#1738..1822#1892..1939#2065..2139#2235..2346#2792..2843#2921..2972#3071..3128#3371..3469#3561..3691#ctcaaatctccaactccaacgaacacacagagggaggaatcggatcggattggatcccaacccaccccgcgccgccgctgccgcgtcccgtcccgaatcctccggcgaggtaaccacctcctccctgccaccccctctctctctacccgctccgccgccgtcacctttcgcgctcgcgacgaggggcctcttccctgggggagtcagtgcggtgcggaagccaatccggtgggggggagtgttggctgttcttggctggcagaaatggggaatcggggttgcgatgctgcgtcttgtcaatgcctttgccgttaaagacgatgcttgagttttaggtttcatttatgatttttctaggacatcagcctgagcaatcgtgatctctgttttttttaaaaaaaaaaagagggggggggggggcgaattttatgggaatgctccatgcagccgagttttcagtaacttgtgcatataccgaattattcatgattttctctgcagaagtgatggttttgctccacttaacaactccaatttaagttttgttgtacggcattttgctgacattgacccgtaactgtcaaaattatcggaaacagaatagattgatgcccccatgctctatcaatatacatgttgtatttgacattatgctcggcttaatctcattgcagcctgacgtcggccgatgggcgcatcagtgactactggcttgcagatggcggcggcacgcccttgtatcccagcttgccaacgcctgctagggtcaagagcagcacttccttcatttggaagggcgcttagtacccaaactggcttcgcgagctgcagaaaaacagcatcagcagggccgtttgtttctctgaaccacaagaggtttgccgtgagggcgatgtctgcccagggactccccattgatctcagaggtaagctttatgcctctcagtcaaaactcaacaaaaaaaaagttctttaactcaattttggagctataatatctagacaagattttgaatggtgtttattttcgtcactcatcatggctaaaaacattttagtggtggtcactaatttctgtaagtgctgtattttagtatgttaatgggcttctaagatgtatgccataaaatggactaccttgatgcattattgaattatctgttataagtctgttattaattatatgtaaactttttactactattaaacatgagtgaacatggttaactcttttggtattgcccttctatatttgagtgatgcactgactcctcgcacgcataaaaagtgctactaacttgtcattactgaaggaaatgtataatctagcacaacccaaaggatatttaatcatgaagtctctaacttgttgcatttttttacaggtaaaagagcatttattgctggagttgctgatgataatggctatggctgggcaatagcaaaagctcttgctgcagctggtgccgagattcttgttggtacatgggtacctgtaagttgatctcattcacgaagtgtatcattatagatgttctggtggaaacacttaattctcattctcatcttcaggcactgaacatatttgagacaagcttgaggcgtgggaagtttgacgaatcacgaaagtgtgttcctaagtgtacttgcagttatttaatgttttgtgtagtccatttcagtgttccatgctggaatgattatcatctccatggtgtctgactacctttgttgcaggcttcctgatggatctcttatggagattacaaaagtctacccattggatgcagtttttgactctcctgaggatgttcctgatgatgtaatgttcatcattttcttttttcatgtcaactcctgttctgtattctgaatcggtcctctggtgtaggttaaagcaaacaaaaggtatgctggatcttcaaactggactgttaaggtaagctgcagtatgccttttttgccatattacttggaaatagatacttgtgaaccatgaggattactaatttgtacgatcctcccaagttccaacccaaggcctaatctgtctttatttcataggaagttgctgaaactgtgaagaatgactttggtaccattgacatcctcgtacactctcttgcaaatggtcctgaggtatgccactatctttctctttctttatctcattgtcgtcatctgattatcctcgtcatcactaacatctatttttttttattttctgctcaaaggtaaaaaactctttgctggagacatcaagaaaagggtatcttgctgcagtttcagcatctagttactctttcatctctttactccaacacttccttcctataatgaatccaggtatcaaacaatctttgctagtgctctgtaactattattattttctctttctgttcaggtgtggatttttaaaaatcatgctactttctcaatttatttggccagtttttcatactactagttgtattgtataacagtacttatttaatgccaactcattggttgcgagttgggccttggctttatccaagaaattacttgctaccaatccttaatatcgtcagatggaaaataattagcgtactgctggttattaactcctggctaacttgtttgccatgtggttaggtgtggaaactgtgactggcaatcgaacaagccctatgggcctttctcatgtttcttagattattttgttctatttagttaggtcggaatctagttgttctagttcaagagtcattgccatttcagcatgcttcacaggaatgtcactgatttgcagggggtgctactatatccttgacctacatagcttccgaaaggacaattcctgggtgaatactctctcaatgtttatcacttctaaattgtgagtattgttacttatattttgtttttattgcttttatagatacggtggcggcatgagctcagcaaaagcagcacttgagagtgatacaagagtatgaacttatgtgtgaagtcgtgcatatttttttaagatcccaaataatgcttggtttgcaaatatttacttctggccattctcttatacttgtaggttctagcttacgaagcaggtcgaaaaggcaagatcagagtgaataccatatcagcaggtatcttacagtaattaatcttcttttcataagaataaagtctcatataaattaatcatttatgtgtcaacattcacgcagcaataagttcaatcccagatgtgtacaatccttttatatgataatacaatttcatttgcacttgcatcctacataatatttcattattcaatgtacgggttttgaggacatctgttctaaactacttggcgacattacattcccatatcctgtttctgcaggtccattgggaagtcgagcagccaaagctattggtttcatcgagaagatgatagagtattcgtacgtgaacgcaccactgcagaaggagctcttggcaggtcgaaattaacttctttcagtttgcctctattgggatgcctatttatgcaccaaaggtcacttataaagctttatttatatgttcaacagatgaagtggggaacacagcagcattcttagcatcgccgttggcatctgcaatcactggatcaactatctatgttgacaatgggctcaatacaatgggacttgcacttgacagccctacactatccacatagacgtgtaaactattctcctggatggttccgtttggtagcagatggtcattaggccccaactgaagctcaaaaccagatgctgatatgaaaatgaggaaagatggtagtttgaagatgcagactttctagaaagttgagttactgggttttcttcattttggtctatgctagcaatgagaattagcattgtaggagtacagtttgttgattgttcttatgttagtcctagcctcctaggatctgatctgaagaaagagaataatggaagttaaaaagaacaggaaatcgaagttctgcccattgcgttgtttgtttttcgtgtagtgttatctctcactcgggttttataaaagttgtaaaaatctataggtattataacgtgtggtacatgatcacacaggtttttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0277800, RefSeq:Os09g0277800