Os02g0778500

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Revision as of 02:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0778500| Description = Conserved hypothetical protein| Version = NM_001054831.1 GI:115449032 GeneID:4330911| Length = 3890 bp| Definition ...")
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Gene Name

Os02g0778500

Description

Conserved hypothetical protein

Version

NM_001054831.1 GI:115449032 GeneID:4330911

Length

3890 bp

Definition

Oryza sativa Japonica Group Os02g0778500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33844317..33848206

Sequence Coding Region

33845318..33845832,33845954..33846164,33846365..33846440,33846543..33846645,33846969..33847037
,33847153..33847189,33847272..33847346,33847420..33847471,33847556..33847600
,33847710..33847810

Expression

GEO Profiles:Os02g0778500

Genome Context

<gbrowseImage1> name=NC_008395:33844317..33848206 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33844317..33848206 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaccggactggtcaattttctccaagtttgaccacaatggagggtacctgcataaattcccaatagattctccaatatctcatgatattggattaggattgatatcacattttggaaccttagtcgagagttcctttcagcatccaaggcatatatgttctacagggaatggagcagttcaggaagcattcagttgcttcaacaagtttgctggtgctttctatttctggctttctagagcatcaaatcccaagattttccacaggttgtcagctattgcaggctcaagttcaagagcctgccagtcgcaaataaagcaagtgacttcttgcatgcagcatttggccggattgcgttttggttctcaagttagagaagagcacgctatacaaattcttttagcaaagcttgctaatgcaacatttgggcgactgtggaacgaggtggaggagcgccatgcctgtaacattcttatgttagctgctgctactgtaccaccatttgaaaacatatcgccgaagatgcttgcagactcaatgacattgggaagagataatggtcgtaccagagaacctgttgatcagcattctttggaggaaaaccattcaggctgtacttgtgttgctgtgccaagaataattttaccagaagacgcaactgaaccaaaaactgggataaagttccctactcttctcgaggataattcaaatccaacttcagaggtgctcgtcgggatgggctttagaagcatgcgaataatgagggtcaaaaacctgaatctctatgcctttggattatatatacaaccagattctatttgcaaaaggctgagcccaaagtatgcttctgttccagtttctgaactgaaggaccacccagatttctatgaagatcttttgagggaaaatattcatatgacagtcaggctgatagttagctacaatggtcttagcattggcacagtgcgggatgcatttgagaagtccctttgcttccgattgcagaagatgaatcctaatactgattatcattgcttgaagacgtttggttcttattttagtgaagatatttgtatacctgcgggtacaaagatcgacttccggcaaacctctgatggccagctcataactgaaattgatggcaaacaaattggtgctgtccagagcaaagatctttgcagggctttcttcgatatgtatattggtgatccacctgtttcagtcgagaccaaacaagacattgcacagaatgttggtggactcattagaagatgttattga</cdnaseq>

Protein Sequence

<aaseq>MKPDWSIFSKFDHNGGYLHKFPIDSPISHDIGLGLISHFGTLVE SSFQHPRHICSTGNGAVQEAFSCFNKFAGAFYFWLSRASNPKIFHRLSAIAGSSSRAC QSQIKQVTSCMQHLAGLRFGSQVREEHAIQILLAKLANATFGRLWNEVEERHACNILM LAAATVPPFENISPKMLADSMTLGRDNGRTREPVDQHSLEENHSGCTCVAVPRIILPE DATEPKTGIKFPTLLEDNSNPTSEVLVGMGFRSMRIMRVKNLNLYAFGLYIQPDSICK RLSPKYASVPVSELKDHPDFYEDLLRENIHMTVRLIVSYNGLSIGTVRDAFEKSLCFR LQKMNPNTDYHCLKTFGSYFSEDICIPAGTKIDFRQTSDGQLITEIDGKQIGAVQSKD LCRAFFDMYIGDPPVSVETKQDIAQNVGGLIRRCY</aaseq>

Gene Sequence

<dnaseqindica>1002..1516#1638..1848#2049..2124#2227..2329#2653..2721#2837..2873#2956..3030#3104..3155#3240..3284#3394..3494#gggcgagtaaatacggaaacgaagccgcttgctttcggtttcctcctcccccatttccttggattttgcgaggtttcctcttcctccacgctctcgaatccgagcagagaagaagcaccagccggggaaggcacgggaaccctaggttggctgcgccgccgcacgcacgcacccgctccctttcgtgctgctgctgctgctgttgttgccgccgcctgcatcgtccccgatccgccggccagccagctagctagcgagggaggccaggtgaggcgctctcggcgttcgttgcgcgtgtggtgaagtcttcgggtggtggggatcgcgaatgcgggtgggtttgggggaatttctgtgagggtggtggggatgggtttgggggaatttgggtgctgcattgggggttggtttggtgctctgcgtgaatctggtggggatagtgagatcgtggtttgttttggtgctaattcgggagttccgggtcgagtttttaggtgattttctgagctgggggtgaggctttgatgatgggaaataaaagtataagcaactagtgtgttcgatcgctacttttgttggcaatattgagatcataccatgtttctctctctctttttgtgtgtgtgagtttcagtttgtgaacgcctgctaaggagaaaaaaggacttcagagttctcacggttgttttcagatgattatttatcgtgtcactatatgaactaatgtaaatagcttagggagtagaaatcagaatttatgtaaaaactgtttttagcaacacatcctagcagacaagttggagattgacttttacatatttgtcttagtagcaaacgtctccaggagtaaaaatcgatgcaaaatcattattgagtaatttattagtactgtcttcttattcggttactttgttctattggcaggttatactgggctttcctcctgataaactcgttctaaagacattcggtgttgccatagttttccaagtgaactcactatgaaaccggactggtcaattttctccaagtttgaccacaatggagggtacctgcataaattcccaatagattctccaatatctcatgatattggattaggattgatatcacattttggaaccttagtcgagagttcctttcagcatccaaggcatatatgttctacagggaatggagcagttcaggaagcattcagttgcttcaacaagtttgctggtgctttctatttctggctttctagagcatcaaatcccaagattttccacaggttgtcagctattgcaggctcaagttcaagagcctgccagtcgcaaataaagcaagtgacttcttgcatgcagcatttggccggattgcgttttggttctcaagttagagaagagcacgctatacaaattcttttagcaaagcttgctaatgcaacatttgggcgactgtggaacgaggtggaggagcgccatgcctgtaacattcttatgttagctgctgctactgtaccaccatttgaaaacatgtaggttcttctatttatattgtttttgtacttccaatgcctgttccatttggctaattcctgtattttggttttcattctatgtgtactttatcgactgctcatttcttgcatggacaagatcgccgaagatgcttgcagactcaatgacattgggaagagataatggtcgtaccagagaacctgttgatcagcattctttggaggaaaaccattcaggctgtacttgtgttgctgtgccaagaataattttaccagaagacgcaactgaaccaaaaactgggataaagttccctactcttctcgaggataattcaaatccaacttcagaggtatttttcaatcttgtatataattgatctgttctttttttttccttattcatgaatgctgataaatagcttcttgacattgtgttagcaacttagtatttcgaaaataataccacaatgttttattccaaatccataatgttgcttgatcttgacccccttaggcccttaacgagttcaactaacggttaaatttacaggtgctcgtcgggatgggctttagaagcatgcgaataatgagggtcaaaaacctgaatctctatgcctttggattatgtgagtataataaaatgtcatgtttaatattattacttatgaaccttttagcataccacataaacgatgtttctttaggttactaatgttgtattcttgtagatatacaaccagattctatttgcaaaaggctgagcccaaagtatgcttctgttccagtttctgaactgaaggaccacccagatttctatgaagatcttttgaggtgtgcatgctctattcatcttttatgcagatctttcccaggttctggcacttaacacatactatgcagtacttgtgtaacgccaggtgttcatttagtaatttggcagaaattatatggatcattaaaagtattggctgttttatgctagaggttaatgggactattccaaacctgcaatcatttgatgtgcttttgaggacttcatttgagtagttttttgtattctgcataagaaacaagaggaatcttaatttttgccccatctgcattcctttcgctctgatctaacaggtttgtgttgtacctgtcatgttgtacagggaaaatattcatatgacagtcaggctgatagttagctacaatggtcttagcattggcacagtgcgggagtatgtattttagttttcttgtgctaatatcagcacattcttatctttagctgtagttcagaagatacaatctctcaatatgcaagctaatcattttctttaacactcttttcagtgcatttgagaagtccctttgcttccgattgcagaaggtacttgttaattcggcagctaaaaatattcttggctaattatataggtctaaaataatttctctgtaccatttcaaaccagatgaatcctaatactgattatcattgcttgaagacgtttggttcttattttagtgaagatatttgtatacctgcggtaagttccaatattacgtctggcctaacttggtacttctcatcataagatactgaagtcaatatgactgcagggtacaaagatcgacttccggcaaacctctgatggccagctcataactgaaagttagtatcgtatgcctgattggttctgcatggttagaatttttacacctgacaaaaatgttgacatggaacgtctttgtgcagttgatggcaaacaaattggtgctgtccagagcaaagatctttgcagtaagtatatatattcgttctttctaacttccagaaaaaaaaaaagacagaattactgttatctgtcattatttatttggcaaattccttatgctgtctttatgaacaggggctttcttcgatatgtatattggtgatccacctgtttcagtcgagaccaaacaagacattgcacagaatgttggtggactcattagaagatgttattgaaaggcataattaaacgacagactggtcggaattatttcattcttcgatacaaggatactagggtgagggggaagcatatacaaagacaggactaggaggagaggatgaactgtatgtatagtgatagatcaacctgtaaactaaacagagccttagcatctttctccggagcaattgcctccatgcttttcatatgggttggctttggctatttcctggccactgtatcatgtgcaatgatccagccagacaatgtaaaagaatgcttccttcccccatctaaaatgagggacaccagctttgctggtttagattaggccatagtagtggtgctgaatataaattgtgtactagtgttgagattaaacagcaagtagtgtactagtgtcacttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0778500, RefSeq:Os02g0778500