Os10g0450400

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0450400| Description = Protein of unknown function DUF594 family protein| Version = NM_001071262.1 GI:115482267 GeneID:4348765| Length = 67...")
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Gene Name

Os10g0450400

Description

Protein of unknown function DUF594 family protein

Version

NM_001071262.1 GI:115482267 GeneID:4348765

Length

6778 bp

Definition

Oryza sativa Japonica Group Os10g0450400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16866172..16872949

Sequence Coding Region

16870335..16872770

Expression

GEO Profiles:Os10g0450400

Genome Context

<gbrowseImage1> name=NC_008403:16866172..16872949 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16866172..16872949 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagccgagtgaaattgccaaatcgatatttctatttctgaaatcagacgaggccatggtcatgcggatcgagttcctggtggtggtcacggccgtattgttcctcctgatgtctatcttggacatgttccgtcatcggtcacgccacaacctcatcaagtattttctattgatcctagacggcataagcgattccacgttgatctacacaattgggctgatgcagagtgtgccttcgctgaagaaagacctgttcccggtgtgggcgctgatgctggtcaacctccggagcagcgtctgcttcatctcggcgtacggcatccctgaccaacagaaccgccggtttacagaggtagcaagggtgatggcacttataggggtggcattcttgaacacaacgttcaacagccggttcaagcatcctatctgggcactttgggcgatgcaggtagtgagatgtggctacctcttaagggtgtacaggctcgccacaaggtcctacttgcatggctggagctcaccgcttctgacagcatacatgggcacccccgatggcgttgctgcgaacggtgatacagccacaatgcgaggatacaagtacttggtatctggagatcagaagcaaacagttgaagtgaagcctcctgagtacaagttcactctgtttgtcccagagcacagaaggaaaatgctcgtcacacttgacaaggtttggcagcaggatgcaagcgacactagttcgactgacatcctaacaccacagatgaaagacatgtgcctgtcttttgcattataccgcttactccgttgcagatttgatgacttgagcctgccaagtgacagtgtcgtcaacaccagaagattaatcagtaaaatcatcggcaaaggcaacgcggatttcgctacacaaataagcaactacagcgagaagaccttcaggattgtgagatcagagctcgcgttcctcaacgactacttctacacaagataccccgtcctcttctggcgtggcttcccaatctttgcttcctgccaccctgtgctaacaattgctttcactgtttggcttggaaaggatctccataaaatttacaagcctaagcaggggggcgccaacgttgatatcatcattacgtgggggttcatgttcatcatcgtgttcaaggagctttggaagatgatcatctacttgctgtcagactggaccaaggtgatggtgctgtgcgagtacactgccgacagctttaagcatgctccacgatggctttgcaagggctttctctggcttctatgcactcgaaggtccaaaattgtccaccattggcacaataaggtaaatcagtatgaattccttcaatcatttaattacaggccttgcaagtggaacattctctactatggaacccttggattgttcgcaagacgaagagatggcgagaaaccaggcaaatcaatcgagctgccagaagacgtgaagtcagccattttgaggtctctctgctcacaaaaccttgagcgagattctttggagccaaatttcccaatattgttttcgacatttggacttccatgctcccacatcatcctcgtgtggcatatagcaacgaccctatgcgagattgagctttctcaacgttacaacggatgcttaactgattctgagctgcagcatgcagtcaaggctggtaagaactcccagccatacgttgtaaaggaagaaaggctggaaggtgcactgcaagctaattacatagtcgcaagttgtatttcaagatactgtgcctatctgcttgtctcagagccagatttgctacctgatacctacttaagttctgcggaggtatttgaaagcaccgtgaaagaggcttcagatgttctaaagggatctgacaacctgcagagcatatacagaaaactgatgtatcatggggatgttgtgaatgtcgataatatgaacagacgtcacccaagtgtgatactcgcgagaagtgcacaagttgctaagtccttggttgaaactgaagtcatggatcgttgggagatgttggctggggtgtgggccgaaatgttagtacatatagctccctcttggaatgcagcagctcacaagaaatgcctttcaaccggtggcgagttcgtaactcaaatctgggccattctttctcattgcaacatacaagaaagcaatctctggccacagcaggaatctccaaatgataatgaagcagagcagcaggaagaaagtgtaagtggcaatcaggcatctttttcagcacaacagcgggcagctgctggtcatggtggagtaagggatgatgaagctggaccgagtgggacaaagccaaatgatgaaacaaaagacgatgacgaaaagaagatgtcggttaatttgagttcaagaacaccaataaaacgtgacagtgtgagttag</cdnaseq>

Protein Sequence

<aaseq>MEKPSEIAKSIFLFLKSDEAMVMRIEFLVVVTAVLFLLMSILDM FRHRSRHNLIKYFLLILDGISDSTLIYTIGLMQSVPSLKKDLFPVWALMLVNLRSSVC FISAYGIPDQQNRRFTEVARVMALIGVAFLNTTFNSRFKHPIWALWAMQVVRCGYLLR VYRLATRSYLHGWSSPLLTAYMGTPDGVAANGDTATMRGYKYLVSGDQKQTVEVKPPE YKFTLFVPEHRRKMLVTLDKVWQQDASDTSSTDILTPQMKDMCLSFALYRLLRCRFDD LSLPSDSVVNTRRLISKIIGKGNADFATQISNYSEKTFRIVRSELAFLNDYFYTRYPV LFWRGFPIFASCHPVLTIAFTVWLGKDLHKIYKPKQGGANVDIIITWGFMFIIVFKEL WKMIIYLLSDWTKVMVLCEYTADSFKHAPRWLCKGFLWLLCTRRSKIVHHWHNKVNQY EFLQSFNYRPCKWNILYYGTLGLFARRRDGEKPGKSIELPEDVKSAILRSLCSQNLER DSLEPNFPILFSTFGLPCSHIILVWHIATTLCEIELSQRYNGCLTDSELQHAVKAGKN SQPYVVKEERLEGALQANYIVASCISRYCAYLLVSEPDLLPDTYLSSAEVFESTVKEA SDVLKGSDNLQSIYRKLMYHGDVVNVDNMNRRHPSVILARSAQVAKSLVETEVMDRWE MLAGVWAEMLVHIAPSWNAAAHKKCLSTGGEFVTQIWAILSHCNIQESNLWPQQESPN DNEAEQQEESVSGNQASFSAQQRAAAGHGGVRDDEAGPSGTKPNDETKDDDEKKMSVN LSSRTPIKRDSVS</aaseq>

Gene Sequence

<dnaseqindica>4164..6599#atcagctcgctctcgcctatcttctcctataatctgagcctggtcgctcgtggttcaccgggaacagacgcgctcgatcgcgcgcctcgtcggcagtcgccaccggtgagcacgtacgcgcatgttaattaaccatgtcatcactaccttctagacctcacacactgacctcatttatcttaccttgtcttcttgttttttttttttttcacgcagtctacgccgtcgagctagcgcccgtggctgccttcgctccaacagcaacccgacgaacggccctcgccgcgcgaagcccttcaattcttccgaagaatctatcaaatcagtgagattaatctacacaaatgtacttcctcgatcacgtagttcgaattcgtccctagctagctagaacaacccgcaaaatcctctgaactggagcacccgatcgattaattgcaggcttgcagctgaagaactgaaactgatcatcccgttgtagttccccccctgagacccaacggcggcgtatgtcgatctcctcgtgccggacctgagcaacgtcgtcggacaaactcgatctccccgctccgaacaaccactcggtaagaattaatcccgctggcttttgtaaatgctctatctgcagttctgcacccccaaaattaaattaattagtcacaatagtcgtcgccggtagcatcctgtactagtcactagtagatttggagtaactgtacgttaatcgctaataggagtattaaaatactgccacaaattttttgagtgaaaaactttcggatataactatactgtaattgcactataactgtagtgtaactatactataactacactttaactacattgtaattacaatataacttatataaaacttgtattcaactattatttggctgattagcaacgggatcttacgcgtgacatgtgtaaaaaaattttctcatttttttccttcatacacaaatctcgaagcgatctaatggtcacgaatctgaaagttttgggagtaaaaaaacttgtagaagttttctagcaattccgaattaattactatacatggttagagttttcaaacttatgctcattttttcagttctttggggttagcatgttaatttacaataattgaaattattggtcacaattattaactcaataaattaataaaaaataccaaagttcactcccacgacctaaaactttcccacattaataaaaaaatagagtcgaagtaaatctacaatttaaaacatttgaaattttgaataaaaataaatatagccatgtataaatacaatttaaagaaaaatcaaattttgtcctaatagataaaatataattaatattcacataagagtacatgtagaaatacaagttagggaaaatatgaaattcggattaaaatatctaaataattaatatttggaaaagagctcatatataaataaatttaagaacatcaaaaattcggattaaaaataaataatattaacaggaagagtcatgcataaatacaatttagaaatgcctaaaattcacataaaaaatattataagaaaatatttaatgcaagagtacaatttggaaatattataaacttgtattgaaaaatagtataaagaggaagagtccacgtagaaatacaatttttaaatacctgaaattctggttgaaaataaatataattgagaaaagtgttcatgtaggagtacaatttagaaaagaaaaaaaaagattgtcaccacgcaaactttatcatatcttccaattggtagcagctggtatatatcctggagaacactacttcaaaagtgaagagttctaggtgtcaaatggattggtctttaattgcaaattttgaatttcaaaattaaattaataagacaaacttgagaattcaagatatgttcaactttgcatctattaattccgaatagtttgaattttgagaggataaaattaaagagcctatggtatctccaattgcatctttttaaacaaataataataccatccacctaatcagtgacttgatcttccagattaccatgcaagctcccttaaagtgcccttaatttgaacaaactttattgcgatactaacatatatatatatatatatatatatatatatatatatatatatatatatatgtatatatatatatatgtattatattatattatattatatattaaaagtccattaaacttcctcaaaacgctctcaactcgccacgtggcactctaataaattagagaaaatcctaggaattctaaaaagagcaaaacatctagctctcgattttcacttaaatttgtggacccattattttataccatcggatcaaatctattaaaagaacctccattcctctaatctacaaaaggcattacccaaaaaaagtacgtaaaaaaagacagagaaaagtaagtaggtactccttgtcaaaaaaaaaaagggccagcgaaagggcccgtagcctaatggttacaagaggctcagtagcacctgaggtcctgggttcgactccccatgagagcgaatttttcaggatttaacggcgttgtgctttcagtggtaggcgacgtactcctcgacagcgaggcgcctgtggtgacttcgtaaatctctccaggatttaccggcccagtcttcgaagatgctcataacatataaacaagaataacatactaccttaaaagaaaagcccaaaaaacataaaagacatagagatatacatccgcttcccccaccttccttctttttcttcctgtatataggtgagataacaattattattattagtgataataaacttcaaataattataattcttacaaacattatatatcattatataactttttacaaaacattcgtgacaaaattagctctacaatgtttagaaataaagtttataaaattattttttacccattaaattaataataataaatttttttcttaaatcggtggaccattctatactattatttttaaatactgcactgtttaaaagcaatgtttacaatattttatgtttgtacctacgaaattaacaatttgtgatctatattaactaatttacccactattttagattatttttaataaaaatattttaccatcgccaaatctattcctttttttaagaaaaaaagcctctgaagacctccctcggaccgtccacccaaggcaggcacacgtcattgccttctacatgcatggcaaagcgtggttactggtaccacagttcaaccgctttgctaaggtgagaacctatcagatcatcactgaataatgatcgggtttgttaataacatgaaaacaatttgaaggagtcagtaaagtatactaacgagtaatgagtggatagagaataaaaacaaatagcttacaaatatatatgagtgattgcatgatgtgtcatattgtgcaaagagttttagtagtgacaaatacaccagtaaaaaggtaagtatgtgctaatttcaattgaaaaaaaaattaggcaaactatgtttttgttaattaagcagtcattaccctttttgtttcatgagtacttatgatgtaaatcagatttaacttatttactataatttacatgacaaaactatattcacgatataatcaaattacatgacaaaaatataatttactgcaaaacacttcaaaatctatgaatacactacacatactaattacatttgtataattcaggtcctatttcaaacaaataagttccttaaaaccccgaagaaaaatataaattgttgaacttctacagaggaaaaaaaatccaacctttgcgaggcaattcaatcacaagaactttgagttccttattctcaaaatttttgctaacagccatattgcttaggagtcataatttctgaacaaacaatatatattattatgtttcaacaatatggatgctggcgcatgcgcgagggccaccttgctagttgagatgaaaaagtagatgcctatggagagcataggtatttcatcatttgctgcattttcggtgggaaaagatttagttactccgatgatttttttttcttggttcgatgtaccgtccttaacaaagttgttgaactttttctttcagcctaaactcttcaaaccggaagaattaataggagaaaaacatggagaagccgagtgaaattgccaaatcgatatttctatttctgaaatcagacgaggccatggtcatgcggatcgagttcctggtggtggtcacggccgtattgttcctcctgatgtctatcttggacatgttccgtcatcggtcacgccacaacctcatcaagtattttctattgatcctagacggcataagcgattccacgttgatctacacaattgggctgatgcagagtgtgccttcgctgaagaaagacctgttcccggtgtgggcgctgatgctggtcaacctccggagcagcgtctgcttcatctcggcgtacggcatccctgaccaacagaaccgccggtttacagaggtagcaagggtgatggcacttataggggtggcattcttgaacacaacgttcaacagccggttcaagcatcctatctgggcactttgggcgatgcaggtagtgagatgtggctacctcttaagggtgtacaggctcgccacaaggtcctacttgcatggctggagctcaccgcttctgacagcatacatgggcacccccgatggcgttgctgcgaacggtgatacagccacaatgcgaggatacaagtacttggtatctggagatcagaagcaaacagttgaagtgaagcctcctgagtacaagttcactctgtttgtcccagagcacagaaggaaaatgctcgtcacacttgacaaggtttggcagcaggatgcaagcgacactagttcgactgacatcctaacaccacagatgaaagacatgtgcctgtcttttgcattataccgcttactccgttgcagatttgatgacttgagcctgccaagtgacagtgtcgtcaacaccagaagattaatcagtaaaatcatcggcaaaggcaacgcggatttcgctacacaaataagcaactacagcgagaagaccttcaggattgtgagatcagagctcgcgttcctcaacgactacttctacacaagataccccgtcctcttctggcgtggcttcccaatctttgcttcctgccaccctgtgctaacaattgctttcactgtttggcttggaaaggatctccataaaatttacaagcctaagcaggggggcgccaacgttgatatcatcattacgtgggggttcatgttcatcatcgtgttcaaggagctttggaagatgatcatctacttgctgtcagactggaccaaggtgatggtgctgtgcgagtacactgccgacagctttaagcatgctccacgatggctttgcaagggctttctctggcttctatgcactcgaaggtccaaaattgtccaccattggcacaataaggtaaatcagtatgaattccttcaatcatttaattacaggccttgcaagtggaacattctctactatggaacccttggattgttcgcaagacgaagagatggcgagaaaccaggcaaatcaatcgagctgccagaagacgtgaagtcagccattttgaggtctctctgctcacaaaaccttgagcgagattctttggagccaaatttcccaatattgttttcgacatttggacttccatgctcccacatcatcctcgtgtggcatatagcaacgaccctatgcgagattgagctttctcaacgttacaacggatgcttaactgattctgagctgcagcatgcagtcaaggctggtaagaactcccagccatacgttgtaaaggaagaaaggctggaaggtgcactgcaagctaattacatagtcgcaagttgtatttcaagatactgtgcctatctgcttgtctcagagccagatttgctacctgatacctacttaagttctgcggaggtatttgaaagcaccgtgaaagaggcttcagatgttctaaagggatctgacaacctgcagagcatatacagaaaactgatgtatcatggggatgttgtgaatgtcgataatatgaacagacgtcacccaagtgtgatactcgcgagaagtgcacaagttgctaagtccttggttgaaactgaagtcatggatcgttgggagatgttggctggggtgtgggccgaaatgttagtacatatagctccctcttggaatgcagcagctcacaagaaatgcctttcaaccggtggcgagttcgtaactcaaatctgggccattctttctcattgcaacatacaagaaagcaatctctggccacagcaggaatctccaaatgataatgaagcagagcagcaggaagaaagtgtaagtggcaatcaggcatctttttcagcacaacagcgggcagctgctggtcatggtggagtaagggatgatgaagctggaccgagtgggacaaagccaaatgatgaaacaaaagacgatgacgaaaagaagatgtcggttaatttgagttcaagaacaccaataaaacgtgacagtgtgagttagtataatattgttgaactcgagctttcttatgtcacatatatgttcctttcttaagaacatgtctgttcattctccatgtgtagtagtttatatggttgttgcttgcatgtactaaggtgtggtctcttgccgtactatgtactttaaacagctgcaaatatcgtgttactttttttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0450400, RefSeq:Os10g0450400