Os02g0778600

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Revision as of 02:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0778600| Description = Similar to CEL5=CELLULASE 5 (Fragment)| Version = NM_001054832.1 GI:115449034 GeneID:4330912| Length = 2549 bp| Def...")
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Gene Name

Os02g0778600

Description

Similar to CEL5=CELLULASE 5 (Fragment)

Version

NM_001054832.1 GI:115449034 GeneID:4330912

Length

2549 bp

Definition

Oryza sativa Japonica Group Os02g0778600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33848832..33851380

Sequence Coding Region

33848908..33849156,33849241..33849651,33849751..33849828,33849919..33850686

Expression

GEO Profiles:Os02g0778600

Genome Context

<gbrowseImage1> name=NC_008395:33848832..33851380 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33848832..33851380 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagccccgctcctcgcgcgacggccataatgccgccgccgccgccgcgctcctcctcgcggcgctggtcctctccggcgacgtcctgccggcggtcgtggccggtggcgccccctcgttcaactacaaggacgcgctcaccaagtccatcatgttcctcgaggcgcagcgctccggcaagctgccgcccaccaaccgcatcaagtggcgcggcgactccggcatggaagacggcaagctcgccaacgtggacctgactggcgggtactacgacgccggcgacaacgtgaagtacgggctgccgctggcgttcacggtgacgacgctggcgtggacggcgatggcgttcgagaaggagctgaaggcggcgagggagctggagaacgtgcacgcggccatcaggtggggcaccgactacttcctcaaggcggcgaccaagaaggaccacctgtgggtgcaggtcggcgaccccaacgccgaccaccagtgctgggtccgcccggagaacatgcccacgccccgcaccctctaccagatcaacgacaagacccccggctccgagattgccgccgagaccgccgccgccatgaccgcctcctccatggtcttccgcaaggataagccctactcccgccgcctcctcaacaaggccaagctgctgttccagttcgccaagacgcaccagggaacctacgacggcgagtgccccttctactgctcctactccggctacaacgatgagttgctgtgggcggcgacgtggctgtacctggcgacgaagaggcaggtgtacgcggacttcatcgggcacgaggcgatctcgtcgagcgtggccgagttcagctgggacctcaagttcccgggcgcgcaggtgctcctcgcggagctcaacatgacatccagcggcggcctccagagcttcaagtcccaggccgacaacttcgtgtgcgccgtgctcccggacaccccgttccaccaggtgtccatcaccccgggcggcatgatccacctccgcgacggcgccaactcccagtacgtcaccagcacggccttcctcttcgtcgcctacagcgacatcctccgccggatcaaccagccggtgatgtgcggcgcccaggccgtgcagcccgcccgcctcctccagttcgccaagcagcagatcgactacctcctcggcgccaacccgcgcggccgctcctacgtcgtcggcttcggcgtcaacccgcccacgcagccgcaccaccgcggcgcctccaccccggtgctccccccgggctaccaggtcaactgcgggatgagcttcagcgagtggttcacccccgaccggcccaaccccaacgagctcaccggcgcgatcatgggcggccccgacggcggcgacaacttctccgacaagcgtggcaactcgtcctgcaccgagccttgcacgtacatcaactccctctccattggccccctcgccgccctcgccatccgtggcccaaacctcatcgccacccagtaa</cdnaseq>

Protein Sequence

<aaseq>MKPRSSRDGHNAAAAAALLLAALVLSGDVLPAVVAGGAPSFNYK DALTKSIMFLEAQRSGKLPPTNRIKWRGDSGMEDGKLANVDLTGGYYDAGDNVKYGLP LAFTVTTLAWTAMAFEKELKAARELENVHAAIRWGTDYFLKAATKKDHLWVQVGDPNA DHQCWVRPENMPTPRTLYQINDKTPGSEIAAETAAAMTASSMVFRKDKPYSRRLLNKA KLLFQFAKTHQGTYDGECPFYCSYSGYNDELLWAATWLYLATKRQVYADFIGHEAISS SVAEFSWDLKFPGAQVLLAELNMTSSGGLQSFKSQADNFVCAVLPDTPFHQVSITPGG MIHLRDGANSQYVTSTAFLFVAYSDILRRINQPVMCGAQAVQPARLLQFAKQQIDYLL GANPRGRSYVVGFGVNPPTQPHHRGASTPVLPPGYQVNCGMSFSEWFTPDRPNPNELT GAIMGGPDGGDNFSDKRGNSSCTEPCTYINSLSIGPLAALAIRGPNLIATQ</aaseq>

Gene Sequence

<dnaseqindica>77..325#410..820#920..997#1088..1855#attgccttctccgtccgtcgcgttgctccggtgctcgatcggtctccccgcccggccgccagacgacgcgccacatatgaagccccgctcctcgcgcgacggccataatgccgccgccgccgccgcgctcctcctcgcggcgctggtcctctccggcgacgtcctgccggcggtcgtggccggtggcgccccctcgttcaactacaaggacgcgctcaccaagtccatcatgttcctcgaggcgcagcgctccggcaagctgccgcccaccaaccgcatcaagtggcgcggcgactccggcatggaagacggcaagctcgccaacgtatacgtcgtctcgcctcgcgccctagctcgaacatctcgctagctgcatcttctaattttgtgaaatggatcactcgatcaggtggacctgactggcgggtactacgacgccggcgacaacgtgaagtacgggctgccgctggcgttcacggtgacgacgctggcgtggacggcgatggcgttcgagaaggagctgaaggcggcgagggagctggagaacgtgcacgcggccatcaggtggggcaccgactacttcctcaaggcggcgaccaagaaggaccacctgtgggtgcaggtcggcgaccccaacgccgaccaccagtgctgggtccgcccggagaacatgcccacgccccgcaccctctaccagatcaacgacaagacccccggctccgagattgccgccgagaccgccgccgccatgaccgcctcctccatggtcttccgcaaggataagccctactcccgccgcctcctcaacaaggccaagctggtacatatatatattcattgattttcatctgttaatttctcttatatagttaatttgcatctaattagctactacctgatgacaaatggaaattcacagctgttccagttcgccaagacgcaccagggaacctacgacggcgagtgccccttctactgctcctactccggctacaacgtacgtctctgcatatgcatgcatgcaaaatttatcaacgtaaaaaatttgacacgttatatatattgtgattgtgactgcatcgatcaggatgagttgctgtgggcggcgacgtggctgtacctggcgacgaagaggcaggtgtacgcggacttcatcgggcacgaggcgatctcgtcgagcgtggccgagttcagctgggacctcaagttcccgggcgcgcaggtgctcctcgcggagctcaacatgacatccagcggcggcctccagagcttcaagtcccaggccgacaacttcgtgtgcgccgtgctcccggacaccccgttccaccaggtgtccatcaccccgggcggcatgatccacctccgcgacggcgccaactcccagtacgtcaccagcacggccttcctcttcgtcgcctacagcgacatcctccgccggatcaaccagccggtgatgtgcggcgcccaggccgtgcagcccgcccgcctcctccagttcgccaagcagcagatcgactacctcctcggcgccaacccgcgcggccgctcctacgtcgtcggcttcggcgtcaacccgcccacgcagccgcaccaccgcggcgcctccaccccggtgctccccccgggctaccaggtcaactgcgggatgagcttcagcgagtggttcacccccgaccggcccaaccccaacgagctcaccggcgcgatcatgggcggccccgacggcggcgacaacttctccgacaagcgtggcaactcgtcctgcaccgagccttgcacgtacatcaactccctctccattggccccctcgccgccctcgccatccgtggcccaaacctcatcgccacccagtaattaatcaccattattatacactgattaattactgctaaattaactaaagatattgagtatattactatattactcctcctcccctgtattaaatctcgacgatatatacaaattaatttgttgattaatcggaatcgaaattagagctgatgcatgcatggacacgtgaggtgatcgatcgggcacacgatcgatcgatgacacgaacgaacaattaataacgcgagaaagggctcgcgcgagttgttggggtaggtctcggctggtcgttaggttggccagcttatttctcgttgcacgcacgcacgcacgtacgtacgcaggcgcgcgcaaccgtgtgtaagtgcgtgtgtgatggatcgatcaaccgagcggcgcgcacgggcgaatacgaacttttccaagtgatgaagtgatcacgtatacacgtagtacagcagccgagcttttcggtgagcgtgtacgacgtgtttttttcattggaccgaacataaaacatgtcaagtacgtacgtggtacgtttggttaatgcataaatgtatttgtggttcttcaaatcccgtgctcaggtatgaattaattaatctagctagctatatggtgtactatcttgtacgaagaagaacatctctgatgctgtatatctttgtgatgtatactacacgcacaataaattatctagtttggtgctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0778600, RefSeq:Os02g0778600