Os02g0780700

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Revision as of 02:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0780700| Description = Lipase, class 3 family protein| Version = NM_001054841.1 GI:115449052 GeneID:4330922| Length = 5246 bp| Definition ...")
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Gene Name

Os02g0780700

Description

Lipase, class 3 family protein

Version

NM_001054841.1 GI:115449052 GeneID:4330922

Length

5246 bp

Definition

Oryza sativa Japonica Group Os02g0780700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33965172..33970417

Sequence Coding Region

33965878..33966189,33967214..33967411,33967542..33967814,33967943..33968045,33968665..33968783
,33969071..33969247,33969336..33970127

Expression

GEO Profiles:Os02g0780700

Genome Context

<gbrowseImage1> name=NC_008395:33965172..33970417 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33965172..33970417 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacagcaacaatggcaaccgcagctggcgcggctgcgcttctgtactacacgctgaaccgccggcttcaggtggagaagctgaatcaggaaggcgattgcggcaatgaaagagatgccgcgacgaggggggccctcagtaccaccagcaggagcagggtgtcaaggagggatgttcgtgcccctgccacatggctggagacaatttccactctgtcggagacactgcggttcacatactcagagacccttgggaagtggcccatcggtgacctcgcttttgggattagcttcctcctcaagaggcaggggaatgtacctgtagcaagcatatatgctggagatgatagtgtggagctcaatggagctccagtaattgctgacttaaagcatcatttaaatttgttgacactatgttggcatttctccaagaagccgttcccgttgtttttggaggcgactggctactcttcggaggatgttcttatgcaagagcctaaagcaggaattttgaagccagctttcaccattatacttgatagagacaagcaatgtatacttctattaattaggggaacccacagcatcagggacacactaacagcagccactggtgctgtggttccattccaccatactattgtacaggaaggtggtgttagcgatttagttttagggtacgcgcactttgggatggttgcagcagctagatggattgcaaagcttgcagccccttgtcttgctcaggcattgcatactcatccagattataaaataaagattgttggacattcacttggtggtggtacagcagctctgttgacatatgtcctgagggaacagcaggagtttgcatctactacttgtgtctcctttgctccagctgcttgtatgacatgggatctggcagaatcaggagtgcattttatcactacagtcatcaatggagctgatctggtgccaaccttttcagctgcatcagtagacgatcttcgttcagaggttactgcatctgcctggttaaacgatctgcgccaccaaatagagcaaaccagaattctgagcactttctatcgatctgcgtcagccttgggatcaagacttccttcaatagcaaatgccaaagcaagagtagctggtgctggtgctatcctaagacctgtatctaccgggacacaggttgtaatgaggagagctcgtagtgtagcacaagcagcttggacaagaccagcacttcagctatcctcatggacatgtattggcccaaggaggcgaactaatactgtatccacttcaacagtaacatcagaagaaataagagcaacaacaaatgatggctctgagtccacttctctgttgactgaaaccacagagatagttaaaactgaaaccatgcagtttgcttcatcagaagaggttcagagttcgagtgaggtgtcagatgctgttggaatgatggatgagaaggtagatagtgacggtgaggacatcattgatcaccatgtggatgaggacaggatgactgacgtagagctgtggcagcaacttgaaaatgagttgtaccgaaggagtgaagatgacgaaatagtggaggatatgactgaaagtgctattactgaagaggtgggtggcacagctgaagatgtgctcagtgagaccaatgacaaggaggtacatagattttatcctccaggaaaaatcatgcatatattaacttccaccatagaggaaacagtcagtgccgaagagtcgagcgtgcctcatgaagatgacacgaccggtgattcggacaccagaataggcatcttcttgaccccaaggtcattatatggcaaactgaggctttcaaaaatgatgattaacgatcattacatgcctatatatagaagaaatattgagcagttgatcgctgagcttgagaaggattcgtcattcccagtcagtgattgtcttgacagtgaagttccctag</cdnaseq>

Protein Sequence

<aaseq>MATATMATAAGAAALLYYTLNRRLQVEKLNQEGDCGNERDAATR GALSTTSRSRVSRRDVRAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLK RQGNVPVASIYAGDDSVELNGAPVIADLKHHLNLLTLCWHFSKKPFPLFLEATGYSSE DVLMQEPKAGILKPAFTIILDRDKQCILLLIRGTHSIRDTLTAATGAVVPFHHTIVQE GGVSDLVLGYAHFGMVAAARWIAKLAAPCLAQALHTHPDYKIKIVGHSLGGGTAALLT YVLREQQEFASTTCVSFAPAACMTWDLAESGVHFITTVINGADLVPTFSAASVDDLRS EVTASAWLNDLRHQIEQTRILSTFYRSASALGSRLPSIANAKARVAGAGAILRPVSTG TQVVMRRARSVAQAAWTRPALQLSSWTCIGPRRRTNTVSTSTVTSEEIRATTNDGSES TSLLTETTEIVKTETMQFASSEEVQSSSEVSDAVGMMDEKVDSDGEDIIDHHVDEDRM TDVELWQQLENELYRRSEDDEIVEDMTESAITEEVGGTAEDVLSETNDKEVHRFYPPG KIMHILTSTIEETVSAEESSVPHEDDTTGDSDTRIGIFLTPRSLYGKLRLSKMMINDH YMPIYRRNIEQLIAELEKDSSFPVSDCLDSEVP</aaseq>

Gene Sequence

<dnaseqindica>707..1018#2043..2240#2371..2643#2772..2874#3494..3612#3900..4076#4165..4956#attcgccgcagggctcggctccacacgaacgcgacgcggcggccgccaccgattccatccggaggaaggagccgcgccgcctccttcctatatccctcctcctctcccgtcctaaaccctagccgcgaccgcgagttcggggtcctaatccggatcgactccgcctccccgagtcgctcggacgcgttcttcttccgggtaatcttaatctcctactattccgcgtttgagcctttacgctctctttctttttcttgtgtgtgcgtgatttggcggtgattctcgaggtaattcgttgcttccgcacgttggttttctcggtcgatttattatcttgtggttttttttggggggttgatttggtgtaggggttcaatgatccattattactacttgtgctgtatgtagggctgggaaaattagggtttgttttcccgtttgtaacggctaattattatctcggtgaaaaatcgacggcctcgctgtaatattaaggctcgaaatctatctgtgtggtaccaggtttgactttgtgctgcccaagattgcatctccagcggaagaatcagagggattaaattaacgctgtctggctgcgccattaataaccttgggtggtggtggtggtggtggtggtggtggtgctccactggagtggaggctgtgagcaagctagtggagtgggggcgtttcttaggcaggtgctatggcgacagcaacaatggcaaccgcagctggcgcggctgcgcttctgtactacacgctgaaccgccggcttcaggtggagaagctgaatcaggaaggcgattgcggcaatgaaagagatgccgcgacgaggggggccctcagtaccaccagcaggagcagggtgtcaaggagggatgttcgtgcccctgccacatggctggagacaatttccactctgtcggagacactgcggttcacatactcagagacccttgggaagtggcccatcggtgacctcgcttttgggattagcttcctcctcaagaggcaggttggtaaccattcctttgttgctaataaacatgcatctttgtaatttgtactacttaataattgtaagctaatagggtctgcttccatgatttatcttgcaaatattgtagtgattataatatggtgcagtgtgcatttatattagctttgttagcataatggggctcttcaattttgttaaactaaaagtaaaataattttggaaacactttatcctagcctataaattgatttgacgatctgaacagctcgcagatcatttacctcatattattcaatctgtattattggctttttgtcttgaacatctgatataagtaaagggagaaggtgctccatacaaccctgcaaaattttacccctctccggaacaacaatttctggtagaagtacatgaaggatttttgtagtatggataaaaaaaaattatggtatcattgaaagaagccctttatgtatatatcatttcatgggaacatatcctgtacacaagccttctcgtgtaaacactgtgcccaccaactaacaaattttataaaaaaatctagaaaaaaatgtacaagtacttccaatagtattacacttatatgcaaagtcttaacctcaaatcaatatattttagccgtgacagaaaagataaaaactcttgacagttttgagagtataaatctgttagaaatttgtctctttttttttgctcactatatataatgaatttgaaaatgagactttacagatagatgtaatactactaaaagtacatatacatttttttttttgaatttttggtgacatgttttagtatatatgagaagacttgtgtgcataggatatgttccctcatttcactccattaaatttacccccattccttttgtatgttaccatccacaatgctgcccatcctaaatacatacaactgaaagcatattttttacagcataaaactaatctgtagtgcacaccggcacacacacacttcagcagagtttctgatccactggttgtgacatgtgttccaggggaatgtacctgtagcaagcatatatgctggagatgatagtgtggagctcaatggagctccagtaattgctgacttaaagcatcatttaaatttgttgacactatgttggcatttctccaagaagccgttcccgttgtttttggaggcgactggctactcttcggaggatgttcttatgcaagagcctaaagcaggagtgagtgaattttacctgtgtttctttaggggtatctcttctcttgctgattctgcattcctgtaatatttcacaaggaaaaaagtgcctactttgcattgatctggtgtttttcttgggatccttgcagattttgaagccagctttcaccattatacttgatagagacaagcaatgtatacttctattaattaggggaacccacagcatcagggacacactaacagcagccactggtgctgtggttccattccaccatactattgtacaggaaggtggtgttagcgatttagttttagggtacgcgcactttgggatggttgcagcagctagatggattgcaaagcttgcagccccttgtcttgctcaggcattgcatactcatccagattataaaataaaggtacagcgctttgcactgtttttgtgctctcctacccactgttgtaatagtgctgaacgtcgtatcagcacaaccatttagagacggatgcacttattctgtattgtgttcatggtaaatttgtatagattgttggacattcacttggtggtggtacagcagctctgttgacatatgtcctgagggaacagcaggagtttgcatctactacttgtgtctcctttgctccaggtatgtgtgctatgatgtttttctgagagttatcttgctgcacactgaacaatgaaaattgaaaatactgctttgtcacttttccttattccactggccatctcctttgttaacataaacctgcatctcatgcagtaaacattataggataacggactagatatctctttgacgaataagttcttttttctttgggtatttgaaacgtgcatcttaatattttggggcagaaaagtaaacatgtttttttcctcacgtttgagtacaatggttccaatccttatctttttagatcaacttatggtgtagatagtgatttaatgatcttaagattgaaactgctattgtttggagctatcataaacataattgttgtctacctagaatctcatataaacttaactcttcttccccaattctcattggaagcttacttttgattctcctagaagttaggcctgtcgaatctaatagagccatgtgcatatttgcatcttaagaacatggagttttttccactgcaaactccgaacaaaatgttgatggactaccatatctccaatacagaagttgcaatattgggattgatttattgttttgttgatgctctattttgcagctgcttgtatgacatgggatctggcagaatcaggagtgcattttatcactacagtcatcaatggagctgatctggtgccaaccttttcagctgcatcagtagacgatcttcgttcagaggttttttttgcattctattgatttattctctgcagtggaacatagtattacagctagtcttatcagcttatcaactgtcaacaggattgttgtaattgatatgagttcttattcttgttgaagtagatataagatataatagtcatagttaagttgcataaaaaatatctttttttttcatgtctgtagggatgtttgtatatcgtcatagctcacaataatgccatttttgtaataaaataactcctgcttttttcaaaatataaaatagaagttattgcatacaggttactgcatctgcctggttaaacgatctgcgccaccaaatagagcaaaccagaattctgagcactttctatcgatctgcgtcagccttgggatcaagacttccttcaatagcaaatgccaaagcaagagtagctggtgctggtgctatcctaagacctgtatctaccgggacacaggttgcctccatagctttgttctcgctaagttcaaatacatttatgttatccttgactaataatgttggctatgtatccttatggtcaggttgtaatgaggagagctcgtagtgtagcacaagcagcttggacaagaccagcacttcagctatcctcatggacatgtattggcccaaggaggcgaactaatactgtatccacttcaacagtaacatcagaagaaataagagcaacaacaaatgatggctctgagtccacttctctgttgactgaaaccacagagatagttaaaactgaaaccatgcagtttgcttcatcagaagaggttcagagttcgagtgaggtgtcagatgctgttggaatgatggatgagaaggtagatagtgacggtgaggacatcattgatcaccatgtggatgaggacaggatgactgacgtagagctgtggcagcaacttgaaaatgagttgtaccgaaggagtgaagatgacgaaatagtggaggatatgactgaaagtgctattactgaagaggtgggtggcacagctgaagatgtgctcagtgagaccaatgacaaggaggtacatagattttatcctccaggaaaaatcatgcatatattaacttccaccatagaggaaacagtcagtgccgaagagtcgagcgtgcctcatgaagatgacacgaccggtgattcggacaccagaataggcatcttcttgaccccaaggtcattatatggcaaactgaggctttcaaaaatgatgattaacgatcattacatgcctatatatagaagaaatattgagcagttgatcgctgagcttgagaaggattcgtcattcccagtcagtgattgtcttgacagtgaagttccctagtttgacacatacatatatgtagttccagctgttgtaaacgctgatgcaatagaatgatagtttcgttaagtgtatctaacatcctctggaataattacagaattctcaggtccctaatcacaaggcaccacaaacgttgccctatttcttacaaactcaaggaccatttctgttacgcaaagaaatttctacctttttttcgtttagaggatgtgaaattatttaagggattagctatacaactttgaacggaaaatttccctaaaatctattaaatgtaattatagtat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0780700, RefSeq:Os02g0780700