Os02g0781400

From RiceWiki
Revision as of 02:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0781400| Description = Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperoni...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0781400

Description

Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10)

Version

NM_001054844.1 GI:115449058 GeneID:4330925

Length

2522 bp

Definition

Oryza sativa Japonica Group Os02g0781400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34001643..34004164

Sequence Coding Region

34001884..34002057,34002148..34002225,34002365..34002520,34003053..34003232,34003884..34004063

Expression

GEO Profiles:Os02g0781400

Genome Context

<gbrowseImage1> name=NC_008395:34001643..34004164 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34001643..34004164 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccgtgcagttctccgccgctggagttggcgcggtggccttcgctacgaaggggatggcctcccgcgacgcgctccgcctcccgccgccggcggccgtccgggtgctccgccaggcgccgcggccgtcacgcggcctcgtcgtcagggccgccgccgccagcgtcgccccgaagtatacaacgctcaagcccttggctgatagagtgcttgtaaagattaagtctgctgagcagaagacaactggtgggattttgcttccttcggctgctcagtctaaaccccaagggggtgaggtagttgccattggggagggacgaactgttggggataacaaagtggaagttagcattcaggttggatcccaagtcgtatattcaaaatatgctggaacagaggtggagttgaatgattccaaccatctgattcttaaagaggatgacatcattggtattctggagactgatgatgcaaaggacatgaagcctcttagcgatcgtgttcttatcaaggtcgctgaagctgaagataaaactcctggtggcctattgcttactgaaacaacaaaggagaagccgtctattggaacggtcgtggctgttggccctggtcctctggatgaggaaggcaagaggattccattgtcggtctctgcaggcagcactgttctatattccaaatatgctggcagcgagttcaagggctctgatggcacgagctacatagtgttgcgggtgtcagatctaatggctgtcctctcctga</cdnaseq>

Protein Sequence

<aaseq>MAPVQFSAAGVGAVAFATKGMASRDALRLPPPAAVRVLRQAPRP SRGLVVRAAAASVAPKYTTLKPLADRVLVKIKSAEQKTTGGILLPSAAQSKPQGGEVV AIGEGRTVGDNKVEVSIQVGSQVVYSKYAGTEVELNDSNHLILKEDDIIGILETDDAK DMKPLSDRVLIKVAEAEDKTPGGLLLTETTKEKPSIGTVVAVGPGPLDEEGKRIPLSV SAGSTVLYSKYAGSEFKGSDGTSYIVLRVSDLMAVLS</aaseq>

Gene Sequence

<dnaseqindica>2108..2281#1940..2017#1645..1800#933..1112#102..281#ggctgctgctgctgctgctgctctctccgcgctgcgcttccgctgctctagggtttatctcctgctgccgctcggatttcgcggcgagcaatccaccggagatggcgcccgtgcagttctccgccgctggagttggcgcggtggccttcgctacgaaggggatggcctcccgcgacgcgctccgcctcccgccgccggcggccgtccgggtgctccgccaggcgccgcggccgtcacgcggcctcgtcgtcagggccgccgccgccagcgtcgccccgaaggtgcgttttcagtgcaatgtaccatggtgggcacactggtaatgctattctcggttcagagtttttcacttagagggttagttggtgaatcgctggattgggtattgcgggcaatgctattacgatagcgatgaaatcgacgatgattccgctgggttaactgatttatttctgttgaatttaatgatgaatggtgatagatggatatccgagcccgtctggtgtacggtgtgccctgtacacacctgtattgctgtggtggttagctcatggtgattgctgattaggaagttttaagattgtgatgcagtgagctgtgatgtgtctatcgctgctttcccacgttgactaccgaacttactgtcagactgatgaatgatgaagtgcaaatcagttttggaaaaaaaatgaattatgtatccttgtaataaaagagtaatgaagtgaattatagctactctatactttatattttaattattatgagcaataaaataatgacttacaagtacactatggattcagtgaagatatcgaaagggggggggggggttgaaagcaattctatgcttaatattttagtttattttccagaaaatatatttgttatgcttttcagtgatgaagttatgttctgttattcacttgcagtatacaacgctcaagcccttggctgatagagtgcttgtaaagattaagtctgctgagcagaagacaactggtgggattttgcttccttcggctgctcagtctaaaccccaagggggtgaggtagttgccattggggagggacgaactgttggggataacaaagtggaagttagcattcaggtatatttttctttgcaatatagtgaaaaaatatgtatgatgctttctaacagaatcaatgagccttactggtacagctattcgactagtcattcatggatcataaagcattgtttcttccagttgtctggagcatttgtttccatgtatcatttggttggtaggttccaaccaacctgtccaaagaactattatagaataataataaggtgcgaggctcgcctgttccagcctccaggtacatgaatacagaaatcagacctgaaacaaaaagagtaaaactggcggatttagcattggacccgtggctaataatccaataatgagcatgctgaaaagtcgggtatgataaagttgttaaaggatttatgttgcctgttttgacttaagatgtttcatattttattgaggtgaatcttacttgattgtttttttaaatttctcgaagtgtgatcattttgagtgtaaacaagctattactgttggcaaacaaaagaatatatactaaaatgcacatatgtgacttgcataggttggatcccaagtcgtatattcaaaatatgctggaacagaggtggagttgaatgattccaaccatctgattcttaaagaggatgacatcattggtattctggagactgatgatgcaaaggacatgaagcctcttagcgatcgtgttcttatcaaggtggacatttcttatacatttgtctggatagcagtgtaatgttgttgattaagtaggcatggccaactaaagctgaggccgccctccttttgattgtaataatttcttcctgttttcctacccttttctcatactataggtcgctgaagctgaagataaaactcctggtggcctattgcttactgaaacaacaaaggagaagccgtctattggaacggtcagtcactcaatttgttagttctgctggatattttgtggttttgatcaaagttaaggaggtaatgatgtgttggttgattggtgacaggtcgtggctgttggccctggtcctctggatgaggaaggcaagaggattccattgtcggtctctgcaggcagcactgttctatattccaaatatgctggcagcgagttcaagggctctgatggcacgagctacatagtgttgcgggtgtcagatctaatggctgtcctctcctgaattaccaggtgcgctcagctgagccatccatcgtactatgccctttcagcaaccatcttttttggaaaatattgctcctggagataacattaaagccactcgaatccccttttgttacaccaaaattggggtggtggtatatcatactgataaattataatgaatgccaactttttttggttgttttcagctttgtaatgatttatagaaaaatgggagaataactcctaacctttgcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0781400, RefSeq:Os02g0781400