Os02g0789600

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0789600| Description = Similar to DEM2| Version = NM_001054888.1 GI:115449146 GeneID:4330969| Length = 3107 bp| Definition = Oryza sativa ...")
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Gene Name

Os02g0789600

Description

Similar to DEM2

Version

NM_001054888.1 GI:115449146 GeneID:4330969

Length

3107 bp

Definition

Oryza sativa Japonica Group Os02g0789600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34434157..34437263

Sequence Coding Region

34434234..34435799,34436685..34436972

Expression

GEO Profiles:Os02g0789600

Genome Context

<gbrowseImage1> name=NC_008395:34434157..34437263 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34434157..34437263 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcgcccacagccgcgaggacctcgacctcacctcctccgacgacgaggacgacgacgaggagtacgacgcccagaccgccacctccgccgcctctcgagaggacatcctccggacctctaccccctcctccctcgagttcctcgacgcgaagctgaaagcgctcgatctcaagtaccaggcgccgaacgcggcgaagctgtacctccacgtcggcggcgcctccgcctccgcgcgctgggtgccggccgagcggcgggcgacctacgccttcgtcgacaaggcgacggcggcgggcgacagcgattgtggcggcccgaggtgggttctggaggttggtccgggtcccagggtctccgcccccgtcggcccggcgctacagctcaaggcgctccccgcgcagcgccgggccgatttcgccgcgggcggctccgtctgggcgctgcggctgccgaccgacgccgccttccgccgattccggcaggagtacgaccggtgcctgttcgagaacacgtatggcgtcgaggccacggatgagggccggaaggaggtgttcggcgctgacttcgccgcgtgggcgcgccccggtgagtccgacgacgccgtctgggccgacgcagaggactccttcacccctcccgttgcgaccccggcgagagacctgctcgaggagttcgaggaggaggccggggacggcagcatccagagcctcgcgctgggcgcgcttgacaacagcttcttggttggagggtcagggatacaggtggtcaagaatttccggcatggcgtgcacggcaagggcgtctctgtgaggatatctgatggccgtggtggtgggaacgcgtacatgacaccgcagaaggctctgcttatgcgtggcgagacgaatatgcttctgatgagccctggagagactggcactcgccattccaatggcgtccatcatgttgatatagagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatgcgagacatcgccaacgacagtaagggcgcgcagctggaaccctctggatcaaccttcttaggattggatgacaaccggctatgccggtgggatatgagggattccaggggcagggtgcaaacaattgggagctcatctgagtcaccggtgctgcaatggtcgcagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggttcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcggatggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttatgatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatctttaaggacaaggatggtaaagagaagacaggattcagtgggcgtatgggaaataggattgcagcaccaagattgctgaagctctccccattggattcaattttggcagggtccgagaacaaattccatggcgggcagttctcttgggtaacagagaatgggaagcaagaaaagcatcttgttgcgacagttggcaaatttagtgtcatttggaactttcagcaggtgaaggacagcaaccatgagtgctaccgcgatcaggaagggctcaagagctgctattgttacaaagttgtcctgaaagacgaatccattgttgacagccgtttcatgcacgagaaatttgcaacaaccgactcccctgaggctcctctggtggtggcaacacccatgaaagtcagctccttcagtttagccaatagacgattacactga</cdnaseq>

Protein Sequence

<aaseq>MGGAHSREDLDLTSSDDEDDDEEYDAQTATSAASREDILRTSTP SSLEFLDAKLKALDLKYQAPNAAKLYLHVGGASASARWVPAERRATYAFVDKATAAGD SDCGGPRWVLEVGPGPRVSAPVGPALQLKALPAQRRADFAAGGSVWALRLPTDAAFRR FRQEYDRCLFENTYGVEATDEGRKEVFGADFAAWARPGESDDAVWADAEDSFTPPVAT PARDLLEEFEEEAGDGSIQSLALGALDNSFLVGGSGIQVVKNFRHGVHGKGVSVRISD GRGGGNAYMTPQKALLMRGETNMLLMSPGETGTRHSNGVHHVDIETGKVVAQWRFEKD GTDITMRDIANDSKGAQLEPSGSTFLGLDDNRLCRWDMRDSRGRVQTIGSSSESPVLQ WSQGHQFSRGTNFQCFASTGDGSIVVGSVDGKIRLYSKSSMRMAKTAFPGLGSPITHV DVTYDGKWILGTTDTYLILICTIFKDKDGKEKTGFSGRMGNRIAAPRLLKLSPLDSIL AGSENKFHGGQFSWVTENGKQEKHLVATVGKFSVIWNFQQVKDSNHECYRDQEGLKSC YCYKVVLKDESIVDSRFMHEKFATTDSPEAPLVVATPMKVSSFSLANRRLH</aaseq>

Gene Sequence

<dnaseqindica>78..1643#2529..2816#catctccgctccattcccccctcccgtgtcgcagcgagaagcatccatcggaattctcgtcgaccaccgcaaccgccatgggcggcgcccacagccgcgaggacctcgacctcacctcctccgacgacgaggacgacgacgaggagtacgacgcccagaccgccacctccgccgcctctcgagaggacatcctccggacctctaccccctcctccctcgagttcctcgacgcgaagctgaaagcgctcgatctcaagtaccaggcgccgaacgcggcgaagctgtacctccacgtcggcggcgcctccgcctccgcgcgctgggtgccggccgagcggcgggcgacctacgccttcgtcgacaaggcgacggcggcgggcgacagcgattgtggcggcccgaggtgggttctggaggttggtccgggtcccagggtctccgcccccgtcggcccggcgctacagctcaaggcgctccccgcgcagcgccgggccgatttcgccgcgggcggctccgtctgggcgctgcggctgccgaccgacgccgccttccgccgattccggcaggagtacgaccggtgcctgttcgagaacacgtatggcgtcgaggccacggatgagggccggaaggaggtgttcggcgctgacttcgccgcgtgggcgcgccccggtgagtccgacgacgccgtctgggccgacgcagaggactccttcacccctcccgttgcgaccccggcgagagacctgctcgaggagttcgaggaggaggccggggacggcagcatccagagcctcgcgctgggcgcgcttgacaacagcttcttggttggagggtcagggatacaggtggtcaagaatttccggcatggcgtgcacggcaagggcgtctctgtgaggatatctgatggccgtggtggtgggaacgcgtacatgacaccgcagaaggctctgcttatgcgtggcgagacgaatatgcttctgatgagccctggagagactggcactcgccattccaatggcgtccatcatgttgatatagagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatgcgagacatcgccaacgacagtaagggcgcgcagctggaaccctctggatcaaccttcttaggattggatgacaaccggctatgccggtgggatatgagggattccaggggcagggtgcaaacaattgggagctcatctgagtcaccggtgctgcaatggtcgcagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggttcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcggatggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttatgatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatctttaaggacaaggatggtaaagagaagacaggattcagtgggcgtatgggaaataggattgcagcaccaagattgctgaagctctccccattggattcaattttggcagggtccgagaacaaattccatggcgggcagttctcttgggtaagtgtgaatttcctattttgtacagcatattgtttttcataattgagatagaacacacggtagtgaatgttcctattttgtaatctagtaaagccaaacagaatgttgcttcatatgtgcatgctagcaaaccatctacacttatctatcttgtctatagtaaaagtttgttttcacttatgatcagtcagtgcaagcgtttcatatccaaaatggctgcttgtcagtaatttgctgtgcctataatacaatctgaccaggaaaatgtgttcactctatgtctctatctcctatgtatgttaattgacacattaatatcttgaaataatcatgctgtaccttttgggagaaactggtaaagttatgatccatcccagtttagggtagtacggctaataaatatgttttcagttaattcattggtagcaagtatgttcaatatttacataagcttgttaaattaaaaacaagcttattgactgcttgtttggaacatttggttgcttgaagttccaattctcagcttgtcaaggggctaatgagtagaactaaagtaaagaaccctgcaccttaggccctagctctgtttttaacggatcaacctgtgaccttgtcataagagtgtatgaagtaattgcagtaaatcagttgtttcacttgcgtcaatcatgttgattttgttctagtggcaatcagttgtttcacttacgtcaatcgtgcattataaaaagtttcatcctgcagttctgttatgtccatttggcatttggcatttgccatgttaactttcttgctaaattaatgcctacatgctgcataattattcaatttgttaagtatatgtccttatgtatgttcctctatatgttctgattttcccaggtaacagagaatgggaagcaagaaaagcatcttgttgcgacagttggcaaatttagtgtcatttggaactttcagcaggtgaaggacagcaaccatgagtgctaccgcgatcaggaagggctcaagagctgctattgttacaaagttgtcctgaaagacgaatccattgttgacagccgtttcatgcacgagaaatttgcaacaaccgactcccctgaggctcctctggtggtggcaacacccatgaaagtcagctccttcagtttagccaatagacgattacactgacagtcttattttgctttgcgtatcatggtgggagaatctactggtttttgtgtagctcactgctgttcctttcgtggtgcgagaatctacaggttcactgctgttcctattggttcatttgttacttgattttggtgtagcaggcatgttgataatactagtactctttgtgaagattgctggagttgtaatacttgttagttgtaactaggtttcggtgtactctttgtaaatgttgacgatagcgttctgggtgaagacctaatctcttctgggactggagttgtaact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0789600, RefSeq:Os02g0789600