Os02g0793200

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0793200| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001054902.1 GI:115449174 GeneID:4330986| Leng...")
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Gene Name

Os02g0793200

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001054902.1 GI:115449174 GeneID:4330986

Length

2206 bp

Definition

Oryza sativa Japonica Group Os02g0793200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34593377..34595582

Sequence Coding Region

34593504..34594925

Expression

GEO Profiles:Os02g0793200

Genome Context

<gbrowseImage1> name=NC_008395:34593377..34595582 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34593377..34595582 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgcatggtgttcgaaggggtcgggagcgatggctcggggtcgggggcggtggctgctgccgacgcggctgctgaacgtctgcctcgccgcgctctgccgcggggggagcctcgccgccgcggaatccgtcctcgtcgacgccatccgcctcggcctgccacccgacgtcgtcacctacaacaccctcctcgccgcccactgccgcgccgcgggcctcgaggctggcctcgtcgtcatgggacggatgcgggaggccggggtggagcccgacgccgtcacctacaactccctcatcgcgggggccgcgcgccgcgggctcccgatacacgccctcgacctgttcgacgaaatgctccgttcggggatcgcccccgactcctggagttacaaccccctcatgcactgcctgttccggtccggccacccggaggatgcctaccgggtgtttgctgatatggctgagaaaggcattgcgccgtgcgacaccacctacaacactctcctcgacgggatgttcagggccggttatgcgatgaacgcatacaggatgttcaggtacctgcagagggcggggctccccgtgagcattgtgacttacaacaccatgattaacgggctgtgcagttcaggcaaggtgggctatgcccggatggtccttagggagcttgggaggactgatcatgccccaaatattatcacttacacggcagttatgaaatgctgctttaagtatggtaggtttgagcaggggttggacaccttcttgtcattgctggacagagggtacatttcggatgtctacccttactgcacagtgatcagtgctttggttaagaagggccggttgggagaagctaataattattgtgacctcatgctacaaaatggatctaggcttgacagtgtgtgctacaacacgctgattcacatgcgatgccaagaagggaagctggatgacgcatttgagcttgtgagcatgatggaagatggcggcctggagagtgatgagtacacattcgcaattttggtcaacgggctgtgcaagatgggacatatcgaggctgcagaaaagcagctattttacatggagatcaagggcatgcaatctaatgttgtggcatacaattgcttggttgatgcgctctgcaaatttcaagaggtggatgcagctatcagattactgcagtgtatgaaactaaaggatgattttacttacacatcactagtccatggtctatgtagggtgggtagataccatatggcatcaaaattcttgcgaatctgcttgcatgaaggtaataatgttcttgcatctgcaaagcgtgctgtcattgctgggcttcgtagctcagggtttaaaaatgatttgaggaaagtccgggtagcattaaatatggctaagctgttacgaccataa</cdnaseq>

Protein Sequence

<aaseq>MPAWCSKGSGAMARGRGRWLLPTRLLNVCLAALCRGGSLAAAES VLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGVEPDAVTYNSLIAG AARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIA PCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYAR MVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVIS ALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELVSMMEDGGL ESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLVDALCKFQEVDAA IRLLQCMKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLHEGNNVLASAKRAVIAGLR SSGFKNDLRKVRVALNMAKLLRP</aaseq>

Gene Sequence

<dnaseqindica>128..1549#ggcgatcaccccgtgggcggcggcgccgccgtcctcaggccgccggccgccgcgtgcggtcgagctgccttgccatggcaaggccgcagccttgctgatagcgaacggaggaaaacgaccaggctgtatgcccgcatggtgttcgaaggggtcgggagcgatggctcggggtcgggggcggtggctgctgccgacgcggctgctgaacgtctgcctcgccgcgctctgccgcggggggagcctcgccgccgcggaatccgtcctcgtcgacgccatccgcctcggcctgccacccgacgtcgtcacctacaacaccctcctcgccgcccactgccgcgccgcgggcctcgaggctggcctcgtcgtcatgggacggatgcgggaggccggggtggagcccgacgccgtcacctacaactccctcatcgcgggggccgcgcgccgcgggctcccgatacacgccctcgacctgttcgacgaaatgctccgttcggggatcgcccccgactcctggagttacaaccccctcatgcactgcctgttccggtccggccacccggaggatgcctaccgggtgtttgctgatatggctgagaaaggcattgcgccgtgcgacaccacctacaacactctcctcgacgggatgttcagggccggttatgcgatgaacgcatacaggatgttcaggtacctgcagagggcggggctccccgtgagcattgtgacttacaacaccatgattaacgggctgtgcagttcaggcaaggtgggctatgcccggatggtccttagggagcttgggaggactgatcatgccccaaatattatcacttacacggcagttatgaaatgctgctttaagtatggtaggtttgagcaggggttggacaccttcttgtcattgctggacagagggtacatttcggatgtctacccttactgcacagtgatcagtgctttggttaagaagggccggttgggagaagctaataattattgtgacctcatgctacaaaatggatctaggcttgacagtgtgtgctacaacacgctgattcacatgcgatgccaagaagggaagctggatgacgcatttgagcttgtgagcatgatggaagatggcggcctggagagtgatgagtacacattcgcaattttggtcaacgggctgtgcaagatgggacatatcgaggctgcagaaaagcagctattttacatggagatcaagggcatgcaatctaatgttgtggcatacaattgcttggttgatgcgctctgcaaatttcaagaggtggatgcagctatcagattactgcagtgtatgaaactaaaggatgattttacttacacatcactagtccatggtctatgtagggtgggtagataccatatggcatcaaaattcttgcgaatctgcttgcatgaaggtaataatgttcttgcatctgcaaagcgtgctgtcattgctgggcttcgtagctcagggtttaaaaatgatttgaggaaagtccgggtagcattaaatatggctaagctgttacgaccataatccaaggaaaatggcctgaaagatcaattcgcaagagaaatgactggataatcctgcatggagtttaaggatgaatatcttgtcggtggctcagtgcatcattctatagaagtaaaatgggtatactctttttctggagaaactgtaggatggtgatcttgcaatatgcaatcagccttttcactgtcagtctgtcaaacccaagcggaacaaaattaaacatcatgggaagctgcagacatcaccactagttggcgaacggtatcggctcagtatgtgcacaaagccaccactaactggtgtatgccttgccttggattttgttgggaaggtaattgtggatttatattttatattcaagtcttctgcttaaattagttattaccttatcgttgtgtcacagtaaatcatgctaagtttaccctcttttgggtggttgttgcagattgattgggtttagttatctgttgctccagaccagacgatacagagcaagcaattaaaaagaagtacaaaaagctgcagattggtacagaaaaacccatttgtacatcatttttttgtctgttctttaattcttatgaagcagtggaaaaaaaaatctctttgggtgataccatatgtcacagttttaacatattgagcaagttttatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0793200, RefSeq:Os02g0793200