Os02g0793300

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0793300| Description = Similar to Nudix hydrolase 3 (EC 3.6.1.-) (AtNUDT3). Splice isoform 2| Version = NM_001054903.1 GI:115449176 GeneID:4...")
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Gene Name

Os02g0793300

Description

Similar to Nudix hydrolase 3 (EC 3.6.1.-) (AtNUDT3). Splice isoform 2

Version

NM_001054903.1 GI:115449176 GeneID:4330987

Length

9423 bp

Definition

Oryza sativa Japonica Group Os02g0793300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34596925..34606347

Sequence Coding Region

34596991..34597061,34597179..34597361,34597814..34597891,34598202..34598298,34598574..34598707
,34599312..34599393,34599999..34600085,34600243..34600349,34601042..34601213
,34601386..34601627,34601850..34601931,34602322..34602387,34603303..34603380
,34603451..34603546,34604159..34604265,34604399..34604567,34604935..34605018
,34605314..34605408,34605543..34605633,34605710..34605856,34605982..34606044

Expression

GEO Profiles:Os02g0793300

Genome Context

<gbrowseImage1> name=NC_008395:34596925..34606347 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34596925..34606347 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcggagccggaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccaggtcggaggtgcacagggacggcgactaccaccgggcggtgcacgtgtggatctacagcgagagcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccggccagtgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgcgcagcgggagctcgatgaagaactaggcatcaaacttccatctgatgctttcgagctgttatttgtttttcttcaggaatgtgttatcaacaatggcacatacaccaacaatgagtacaatgatgtttatcttgtgactactttaactccaattccacttgaggcattcactctccaagaaagtgaagtatctgcggttaggtatatgcatcttgacgagtacaagagctgccttgcaaaagaaagcggagaatatgtgccttacgatgtgaatgggacatatggccaactatttagtattattgaagaaaggtacaaagacaatatcgaatcccgcagtttaaccttgcaaaagcaaatcaaccgttatgctcccatccatttggaaccagagttgactagtctatcagaaggagacagggaagccttgggatatattcttaaagcatcaatagttattgatgacatcttttatgagcaggtttggaatagcaactgcacgctgagagactggctgaaagcacgtgctaactactcttcttttgataagttgaagtggttgtattattccattaataagagtccatggtcctgccttgatgaaaataaggcttttctatcgactgcagattctgctgtgaaattactcacagatgccaccaaatcagtttcaggatggaaggggattgagtatcgtgctgcatttcctcgagataatcctcccggggcaaacttttatcctcctgatatggacaaaatggagtttgaattatggaaaaatggactgcctgaaaaggagcaaaaatatgcaactggattttttactgtcataaaacggcatgatgccttgttgccttcaatactagcgcagtcagatggatcaaatcaaaccaagacatcagatgatcttttcgttgttccatactctgaggagtacaaatcatcccttgagaaagctgctgagcttcttcataaagcatctgaatgttctgattctccaagcctcaagaatttgctcaaaaccaaggcaaatgctttcctttcaaatgattactatgaatctgatatagcttggatggagctggactccaacttggatgtcactattggcccatacgagacatatgaagatggtctttttagttataaggcaacctttgaagcatttgttggtgtacgggatgacattgccacttctcaagttaaactcttcggtgatcaactccgggatttagagaagcatcttccactggacaacatttacaaatccgacaatgtatctgctgctccaattcgcgttatcaatcttctgtacaactctggggatgtgaaaggcccacaaactattgcttttaatttgcccaatgatgagcggattgtgaatgaacgagggacctcgatggttatgcttaagaacatttcagaagctaagtttaagcatatcttaaagcctatagctaatgcttgcatcagagaggaacaggaagattatgttgattttgagccttattatacacatattgtttgccatgaatgctgccatggaattggtcctcattccataacccttccaactggtaaaagatcaacagttagaatggaacttcaagaatttcattcagcattggaggaggccaaagctgatatagttggtctatgggcactgaattttcttattaaaaagggtttacttcctaagagcctatcagaatccatgtatgtctcattcctggctggatgcttccgatcgatccgctttggactagaagaagctcatggaaaagggcaagctttgcagtttaactggttgtatgagaaaggggcttttgtcttgcattctgatggaaaattctcagttgatttcacaaaggttgaggacgctgtcgagagtctcagtagagagatcctgacaatacaagcaaagggcgataagcctgctgcccagtctcttctgcagtcccatgcaagcttgacgcaaccactgcgtgtggcgctggacaaaatagaacacatgcaggtgcctgttgatatcactcctatattcggcacagcaaataagctgcttgcaaacgatcagtag</cdnaseq>

Protein Sequence

<aaseq>MAAEPEERLDVLTAGGEKTGASKARSEVHRDGDYHRAVHVWIYS ESTGELLLQRRADCKDTWPGQWDISSAGHISAGDSSLSSAQRELDEELGIKLPSDAFE LLFVFLQECVINNGTYTNNEYNDVYLVTTLTPIPLEAFTLQESEVSAVRYMHLDEYKS CLAKESGEYVPYDVNGTYGQLFSIIEERYKDNIESRSLTLQKQINRYAPIHLEPELTS LSEGDREALGYILKASIVIDDIFYEQVWNSNCTLRDWLKARANYSSFDKLKWLYYSIN KSPWSCLDENKAFLSTADSAVKLLTDATKSVSGWKGIEYRAAFPRDNPPGANFYPPDM DKMEFELWKNGLPEKEQKYATGFFTVIKRHDALLPSILAQSDGSNQTKTSDDLFVVPY SEEYKSSLEKAAELLHKASECSDSPSLKNLLKTKANAFLSNDYYESDIAWMELDSNLD VTIGPYETYEDGLFSYKATFEAFVGVRDDIATSQVKLFGDQLRDLEKHLPLDNIYKSD NVSAAPIRVINLLYNSGDVKGPQTIAFNLPNDERIVNERGTSMVMLKNISEAKFKHIL KPIANACIREEQEDYVDFEPYYTHIVCHECCHGIGPHSITLPTGKRSTVRMELQEFHS ALEEAKADIVGLWALNFLIKKGLLPKSLSESMYVSFLAGCFRSIRFGLEEAHGKGQAL QFNWLYEKGAFVLHSDGKFSVDFTKVEDAVESLSREILTIQAKGDKPAAQSLLQSHAS LTQPLRVALDKIEHMQVPVDITPIFGTANKLLANDQ</aaseq>

Gene Sequence

<dnaseqindica>67..137#255..437#890..967#1278..1374#1650..1783#2388..2469#3075..3161#3319..3425#4118..4289#4462..4703#4926..5007#5398..5463#6379..6456#6527..6622#7235..7341#7475..7643#8011..8094#8390..8484#8619..8709#8786..8932#9058..9120#acccaccaaaaagtctccgccacttcaccccgatcgccgccgccgccgccgccgctcgattccccgatggccgcggagccggaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccaggcacgccgcagctaccccctacccagcttactcccgccgccgcttcggttggattccattcgatcggatcgcgtgactccgccgccgcggtttgctcggttttttttttcattgcaggtcggaggtgcacagggacggcgactaccaccgggcggtgcacgtgtggatctacagcgagagcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccggccagtgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgcgcagtgagctcgctaccccttgctcccttgatagaatttcggaatgcgattatctgaattctgcttggggaatcgtagtggcgattttgcctagcagcgtggagaagcacttgtcactctgctttaagtttactatgcacatgggcatgacactcattgcttatatctgcgggagttgtagtctctgagatattgcggttcatctgatcgatgcaactgctgaaacttgattgaattaacttacgtgatgaatgggttgcacacgtgctattatcacatagtgtttgagacgctgttcatattttattttagtttattccacaggttcactgacttgcttgcatttgttgggttggctattactctattgcgtgattctttgctaggctaggtaaaaagggtaatattaaaatgatgcattctaattggtaatagcatttgacatggatcatcaggcgggagctcgatgaagaactaggcatcaaacttccatctgatgctttcgagctgttatttgtttttcttcaggaatggttagtacctctatctcttagtccatcatcttattgtgagtttgcaaactacgatagaaaacgattacttttatcttttttgaccgggtattaaatactattctatccctcatcagtttaagattgtatagcagcatattctgatcataactgcagcggatcttttacaatttcaaacagtacttactgagaggcttgctaagtgctaatatttcatatttcatcactttatgttcacatgaaatttcacactatcagtatctgcataaagggacgttatataatgttatcctctgattctttgctgcagtgttatcaacaatggcacatacaccaacaatgagtacaatgatgtttatcttgtgactactttaactccaattccacttgaggcattcactctccaagtgaggatacaatgattagtaatactttgcattatgtttttttcacttgctcttgcatattcatggttgtcaacatcaacaagtgtgtattacaagaaaaatctgtacttatgttcctggcaccaaaggaaatatatctgagcaagtaaatttatcaacatgacaaaaggaacactatcagaattgtccagtatataaatatttatgatgtaatttctttgttttactagttgtatggtttgtttcataatcaactgtagaagttttaattataggaaagtgaagtatctgcggttaggtatatgcatcttgacgagtacaagagctgccttgcaaaagaaagcggagaatatgtgccttacgatgtgaatgggacatatggccaactatttagtattattgaagaaaggtaagcatccaaattatttgtccagtcatgtttttgtcaatttgtggcctcgattgtcgaagggataattatattcactttggaagaactgaaatgacttttttctgtgatcgatatgaaatttactactaccaacagtctgtggtaacaaaggtgctggtgacaattaaaccatgtccaagctctcatttgacctccaggtttaggtttaaacattgggaagctggagtgagtatttgtctctaggttgacacagtaggttcttaggagttaggatttattgtatagttttttttttaactcatcagagttttaagttgaaaaaaaggatgtggtgtcattgagcaagtcattcgatgggtaagtctctaaacaaaaacttagcatttggtgaatcagggacttttactgtatgttttgagcagcatctgctcctgttaacaacccaccagaattagaactttcaaataactgtttctttgtcttcatctcttgccagttaccactttgaagcaattcaacatatcattcccttggcaatccctgttgcaccacgttttttgtcaaaattatcttgcttcaacctttcatgccatgtttataggtacaaagacaatatcgaatcccgcagtttaaccttgcaaaagcaaatcaaccgttatgctcccatccatttggaaccagaggtaagctgtctatattttttgtcagtcaccctgtagctctggttatttattttccatttcatatttgattatttatgtaactattcttgcctatttggcagccaccaatattcaataccaacaaaattatatgtatgggaaaagggaaacattcacttcatttatgcacatagctactaggtatgccatatgcaatatgcattggatgtatagcacatgaaagctaggtgcgcattgcacaaaaaaaaaagagtactgtttgtatcattatggtggtctgatagttggaaggaatgatatattgtgtcaaattgtctactattgggtagcacctaccagtttcctcaccttttcttggattaatccattcaagattattatttcttagaatattgtatgatacatatactatctataatctgttcatcataaaattctgtgtcataaaagaaagcaacagtttgatttcacacactaggatcataatatttagtttgaacattaggacggaaacaggaaatttgattcatcattcctataatatagtactcacatgcttttttttgtccctggcacgcttgacatttcaatctttggctttgcagttgactagtctatcagaaggagacagggaagccttgggatatattcttaaagcatcaatagttattgatgacatcttttatgagcaggtacatctttcaactttcttcatttttttttgaaacacatattttttattcttattcgttggatatgtcgtttacaattagttagcaaagattatcttcagtgataattattatttttactgcattgcaacttcttactaccctggttctcgattaggtttggaatagcaactgcacgctgagagactggctgaaagcacgtgctaactactcttcttttgataagttgaagtggttgtattattccattaataagagtccatggtaatttattttctattgaagtttcttcacgcatgttgactactttaggtttatttgtacattggatattttgttggttgcatggtgacttgcctatgagttaagatcatgatcttctgaagtctgcatttagtatttgtcttgtgttgccacgttgacgcatataagtttacatgtgttgtgtggatggatatagtttgtatcctaatttttgtgtatctacatctttatgagaaaattaaatgttttgtattgaagaatgcatactttctcagatgttctgtgcagaacttcagtactccatgcatgaaaatgttctttcataccactgttatctaaccattacagaccaattgttttcatttatagattttcttttttgctattcatttttttcatccttaagtttatccctacaaaacgaagtatgcttgtatttcgggctgtatggagtagagaattagtgagatatgtgcatgccctcatggactctaatgaaatatgtacttggtgaaagatatagcagggagcatatttatctatgattagggtgtttatgagcacaaatccattttttattcctactttgtatgcttgtttcgaactcatattatctaattagataatgtataactactatgtattttttagcatcttgatagatgttattatttgatattttcccataacaggtcctgccttgatgaaaataaggcttttctatcgactgcagattctgctgtgaaattactcacagatgccaccaaatcagtttcaggatggaaggggattgagtatcgtgctgcatttcctcgagataatcctcccggggcaaacttttatcctcctgatatggacaaaatggtaagattgtgcttagtcacttttctgcttcccagtgctcaaagtatccagtacaaatttcatatgcagtagtacggttgcttactgagtactgtataagtacgtttgatgtgtacttggtaccgtagtgactgaagcagggccaatttgcatatgttttgtatgtctgtaggagtttgaattatggaaaaatggactgcctgaaaaggagcaaaaatatgcaactggattttttactgtcataaaacggcatgatgccttgttgccttcaatactagcgcagtcagatggatcaaatcaaaccaagacatcagatgatcttttcgttgttccatactctgaggagtacaaatcatcccttgagaaagctgctgagcttcttcataaagcatctgaatgttctgattctccaaggtaagctagtacttcctccgtttcacaatgtaagtcatcctagcatttcccacattcatactgatgttaatgaatctagatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagtagtaatataccagcttttagtttctgaatttagaacttatatgcttttatcttcatgtagcctcaagaatttgctcaaaaccaaggcaaatgctttcctttcaaatgattactatgaatctgatatagcttggatggagctggttagtgtcctaactctcagttttagttcattattttctctttaaatttacaaatgtactggttttctcactagcttgattccttcgttcttggagaaattgttcttgaatgttttaaggcaatttgcaatcttttttttttggaaaaagagaacagtaggtgagttccctactgtagaatgtattgtcaataacacaaataatacaaggtcaagagttttatggtgaataatgtgtggtttatgagcactgcagtatatagtgtagaatatttgttgggtgtatattcataaaattggctgtatttgtcagatttaacagcaatgtttggcatgtacaaatcaggatttgctcatataacctctgtatttggcatttctatctttataggactccaacttggatgtcactattggcccatacgagacatatgaagatggtctttttagttataaggtatttgtctctctttcgagatctacaaagaattttctccttgggatcctttcctacctgttcttgtcatctacctatttgctggtcaagtatttagcatggaatttgcatcaaacaccacatattattttgaaacttcagtaagcttgctcgttatcacatataatgcaggtttgcaacattgttgagtgtgtgcctatttcctgtgttcaattgttatttgtgtttattaactaaatgcccgcgtgcttgctactgataaaaatgaatcatacacatggagcaaattaaatgaacatatgccctctccttttttttttcaatgaaggcaccctcaatacttttatcacagggagtacttctaaaactaactttaatactacatatacatgtgacgttggtcatcttagaccctttccgaatttaagtttgtactttagagaccaagaaaatgatagtatatgaagggacttatatgtaatattggcttcaggaagtatttggtaaaaaatatagtggggtggcagattcactgctacagcccaccagcaccattgacttcctttaataggagtataggtcttttgatggtcatgatattattttattctagtagctatgattttctcttcatacctcaatgctggggctgcccatattatttgggttaaatactaggattttaattcagttaggcaccaccttatccccaatgaagaaagtatggcctataatagtataggaatagagtaggcgacattaccatttagattagggcatgtgtttaaacatgtgtacaggatgtgcacatgcacttttatatcttgaatcaagtttatctacatactaagtttatgcatagagttcaataaaatatatcatttgtttttactagtattttctactattttaaaggcaacctttgaagcatttgttggtgtacgggatgacattgccacttctcaagttaaactcttcggtgatcaactccgggtaactctaatttattttctgtagaaaagtaccaacttttgatttacatgaaatttgatcttaaattcaggatttagagaagcatcttccactggacaacatttacaaatccgacaatgtatctgctgctccaattcgcgttatcaatcttctgtacaactctggggtatgtcccttttgtaacatttctttaatttttggggttcatttaatgctttattttattactgtgaatttgtgatctccctagtcatttgttaaatttctgtttcgatttgaactcattggtacttaaagttttgatatttgtagacacagaaaacttgcttgttttccctttttgcttggtggtagatgggcatcgtcaaaaagaagcttatgcccttaaatccctgagaagcaagtattcagccttttcgtaatatctaatgacaattgatgacacaccatgatttcatgacttttcgtaatatctaatgacaattgatgacacaccatgatttcatgagaggattgctttcttccttttgtttttatgatcaaaggagaaggttgtttactttgtgcttttcttactactgccccagttgcatgttggccaaagaattattgcttagattacttcagcttgagtttgtcactataattggctaaaccattctttgagatcttgagacaattgataggctgagagcgcgtgcagggcttgtgtatgtattgcagatgatttgttgtgccaacagcttcatgatgaactaaacagggactattgttgcaggatgtgaaaggcccacaaactattgcttttaatttgcccaatgatgagcggattgtgaatgaacgagggacctcgatggttatgcttaagaacatttcagaagctaagtatgttcttttaccgattattgtctataaattttaaattggtgactcaggtgatccacactatcagtggcaagtggcaacaaaagtatgggagttcctttttggatgattctaaattttctttacttttcaggtttaagcatatcttaaagcctatagctaatgcttgcatcagagaggaacaggaagattatgttgattttgagccttattatacacatattgtttgccatgaatgctgccatggaattggtcctcattccataacccttccaactggtaaaagatcaacagttagaatggtacgtaactttgtatattcatagaaataaacataaaccaatgcatgaaccttaggtgcactataaacatgtgctttgtttccctcaaaatttgccaccaccttcaaccatttttttacgtaatgtcactaccaaatttcttgtcagattattgacaaatatataaaaataaccaaatttataagtatggatgttgctatagaaaatgcagcatattcacttagcaatggaaaataactttgctaatactcaggtacatgtaggaaaaaaaagatgtgcttatttatctgtcttcacactttaaatttgaaatgctggttatttctctgttatctgatttatagatgacctcttcatgaaaaaacaggaacttcaagaatttcattcagcattggaggaggccaaagctgatatagttggtctatgggcactgaattttcttattaaaaaggtcagttgctttcatcaactatcaagctaccatggcacttagcttagtcgagaccaggcagtcaaatcctgctattgctgtatatgcataagcaaattttcatttggctatatcctcgtttgtgccgtcattactacttagggaaaaacagaaacagtttttccaaactgcatgaactgcacattgcatgagcaccaactgcatgcaattttgcattgactgggttgtgcaaaaccacttaacccggttttgaatagccctactaataatagcacatctgcttctgctctaccagggtttacttcctaagagcctatcagaatccatgtatgtctcattcctggctggatgcttccgatcgatccgctttggactagaagaagctcatgggtgaggctttattttccctgttagcaaactgaattatgtttctggaaaaaaagggaacgcaagtacttctcaattctcatagaatctgtactgtcctgagctctttatataaatcactgttactatgtgtgcagaaaagggcaagctttgcagtttaactggttgtatgagaaaggggcttttgtcttgcattctgatggaaaattctcagttgatttcacaaaggtatttctctcttttttttccttaacattattattgtcatgctgtcaattctcattagaactttgtgccatgaaaggttgaggacgctgtcgagagtctcagtagagagatcctgacaatacaagcaaagggcgataagcctgctgcccagtctcttctgcagtcccatgcaagcttgacgcaaccactgcgtgtggcgctggacaaaatagaacacatgcaggtagctttcaaatttaccggttcatactaaaagaaaattgtaaactatttttcatggcttctctccgagtgtttgattgggttttattttccttgtttatattaacatgttcttgattattttaggtgcctgttgatatcactcctatattcggcacagcaaataagctgcttgcaaacgatcagtagggtgctcggtttagcaagctacgtgcttcagtggaactctgcaagaaaacgtattttgttcgatcctaagatactccatgacaagaaaagcgaaacgggaagttaggaataaatggacaagttatccataaacaataatgttcatgtcttatttttatatttattacgtctttgattgcgagaagaccccttgtaatatttcaggattatcatcagactgctgttgttctatggtgcatgagatgaccggggaaatcacgtgaaactacactggatagcagtaatacactgatcgttctgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0793300, RefSeq:Os02g0793300