Os02g0797400

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Revision as of 02:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0797400| Description = MCM family protein| Version = NM_001054931.1 GI:115449232 GeneID:4331016| Length = 4278 bp| Definition = Oryza sati...")
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Gene Name

Os02g0797400

Description

MCM family protein

Version

NM_001054931.1 GI:115449232 GeneID:4331016

Length

4278 bp

Definition

Oryza sativa Japonica Group Os02g0797400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34823090..34827367

Sequence Coding Region

34823402..34823485,34823567..34823668,34823749..34823878,34824042..34824151,34824228..34824318
,34824410..34824504,34824573..34824668,34824787..34824919,34825036..34825127
,34825212..34825316,34825387..34825464,34825569..34825703,34825789..34825894
,34825989..34826116,34826228..34826326,34826417..34826596,34826671..34826814
,34826901..34827015,34827107..34827273

Expression

GEO Profiles:Os02g0797400

Genome Context

<gbrowseImage1> name=NC_008395:34823090..34827367 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34823090..34827367 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgggttgggacgagggcgccgtcttctacagcgaccaggcgcagttcccgcgcggcggccccggcggcgacccctccgccgacctcacccgccactccgccctccgcaagttcaaggagttcctccgcggcttcaccggcccaaccggcgacttcccctaccgcgagagcctggtgcacaaccgcgaccatgtcaccgtcgccatcgaggacctcgacgccttcgacgccgagctgtccgacaagatccggaagtctcccgctgattacctaccgctgtttgagacggctgcgtccgaggtcctcgcgagccttcggtccaaggtcgctggagagaccggcgagatggaggagcccgccaccggcgacgtgcagatcttcttgtcctcaaaggagaactgcctgtccatgaggtctattggggcggattacatgtccaagctggtgaagattgccgggatcacaatcgccgcgtcgagggtgaaagctaaggccactcatgtcacgctgctctgcaagaactgcagaagtgtgaaaacggtgccgtgtaggcctggccttggtggggctattgtcccacgatcgtgcgaccatgttcctcagcctggagaagagccttgccccttggacccctggattgcagttccagataagagcaagtatgtggatctccagaccctcaaattgcaggaaaatcctgaggatgttccaactggtgagctcccgaggaatatgctgctgtccgtagacaggcatcttgttcagaccattgttcctggaactagattaactgtaattggtatctacagtgtctaccaagcatctgcaaaccaaaagggtgctgttggagtcaaacagccttacattagagttgtggggttggagcagtcccgagatgccaactcgaatggtccctcaaattttacacttgatgaggaaatggaattcaaagaatttgcacagaggccagatgcatatgtcaagatttgctcaatgattggcccttcaatttatggccattctgatgtcaagaaagctattgcatgcttgctgtttggtggctcaaagaagaggctaccggatggtgtccgtttgagaggggacattcatgtcttgctgctgggtgatccatcaacagcaaaatcacagttcctcaagtttgtggagaagacagcgccgattgctgtctatacatctgggaaaggttcatcagcagctggtctcacagcgtcagtaattcgggacggtagctctcgagagttttatttggaaggaggggccatggttttggctgatggtggagttgtttgtattgatgagtttgacaaaatgaggcctgaggaccgagttgcaattcacgaagcaatggaacagcagaccatctcgattgccaaagctggcattacaacagtactcaattcaaggacctcggtactagcagctgccaatccaattgcagggcgctacgatgatcttaagactgcacaagataacattgatctgcagacaaccatcctttctagatttgatctaatctttattgttaaagatgtcagaatgtatgatcaagacaagcgaattgcaagccacatcattaaggtgcatgccagtggtgctgctgcttcatccaagaatacagatgctagtgaaggagagaattggctaaaaaggtacattgagtattgccgtgttacttgtaaaccacgactctcagaaaaggcagcagagatgcttcagaacaaatatgtggagattagacagaaaatgagacaacaagctcatgaaacagggagggctgcagctatacccatcactgtgcggcagcttgaagccattatacgtttgagtgaatctcttgcaaagatgagattgacaagtgtggctacaccagagcatgttgaagaggcatttaggctgttcaatgtctccactgttgatgccgcaagatctggaatcaatgagcatttgaacctatcaccagatattgcaaatgagatcaagcaagctgaggcacaaataaagagaaggatgggaattggaagccacatatccgagcgacgcctgatcgatgaactaaataggatggggatgaatgaatccattgtgcgaagagcccttctgatcatgcaccaaagggatgaagtggagtacaagagagagcgccatgtcattgtccggaaggcttga</cdnaseq>

Protein Sequence

<aaseq>MSGWDEGAVFYSDQAQFPRGGPGGDPSADLTRHSALRKFKEFLR GFTGPTGDFPYRESLVHNRDHVTVAIEDLDAFDAELSDKIRKSPADYLPLFETAASEV LASLRSKVAGETGEMEEPATGDVQIFLSSKENCLSMRSIGADYMSKLVKIAGITIAAS RVKAKATHVTLLCKNCRSVKTVPCRPGLGGAIVPRSCDHVPQPGEEPCPLDPWIAVPD KSKYVDLQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTVIGIYSVYQAS ANQKGAVGVKQPYIRVVGLEQSRDANSNGPSNFTLDEEMEFKEFAQRPDAYVKICSMI GPSIYGHSDVKKAIACLLFGGSKKRLPDGVRLRGDIHVLLLGDPSTAKSQFLKFVEKT APIAVYTSGKGSSAAGLTASVIRDGSSREFYLEGGAMVLADGGVVCIDEFDKMRPEDR VAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPIAGRYDDLKTAQDNIDLQTTILS RFDLIFIVKDVRMYDQDKRIASHIIKVHASGAAASSKNTDASEGENWLKRYIEYCRVT CKPRLSEKAAEMLQNKYVEIRQKMRQQAHETGRAAAIPITVRQLEAIIRLSESLAKMR LTSVATPEHVEEAFRLFNVSTVDAARSGINEHLNLSPDIANEIKQAEAQIKRRMGIGS HISERRLIDELNRMGMNESIVRRALLIMHQRDEVEYKRERHVIVRKA</aaseq>

Gene Sequence

<dnaseqindica>3883..3966#3700..3801#3490..3619#3217..3326#3050..3140#2864..2958#2700..2795#2449..2581#2241..2332#2052..2156#1904..1981#1665..1799#1474..1579#1252..1379#1042..1140#772..951#554..697#353..467#95..261#gtcttcccccctttccccgccgcccgcgcacccacgcgtctctctccctctctctccgccgccgccgccgccgcagccagccagccatccagccatgtcgggttgggacgagggcgccgtcttctacagcgaccaggcgcagttcccgcgcggcggccccggcggcgacccctccgccgacctcacccgccactccgccctccgcaagttcaaggagttcctccgcggcttcaccggcccaaccggcgacttcccctaccggtgcgccccccctccctcccagatctggtgcctcgtcggatggtcgaattcgctctgaccaatccagtgtgtttttgtttgatggttgcagcgagagcctggtgcacaaccgcgaccatgtcaccgtcgccatcgaggacctcgacgccttcgacgccgagctgtccgacaagatccggaagtctcccgctgattacctaccgctggtgtgtgctggttctttctgaatttttgttggctctgggttctgttgatgtcaattttttgtgttaagatttagggttttgtgtagtttgagacggctgcgtccgaggtcctcgcgagccttcggtccaaggtcgctggagagaccggcgagatggaggagcccgccaccggcgacgtgcagatcttcttgtcctcaaaggagaactgcctgtccatgaggtctattggggtcagttctgaaacgattttgttagtagccttgtgaagaatttcaaattgacacaactgtattccaaattccaggcggattacatgtccaagctggtgaagattgccgggatcacaatcgccgcgtcgagggtgaaagctaaggccactcatgtcacgctgctctgcaagaactgcagaagtgtgaaaacggtgccgtgtaggcctggccttggtggggctattgtcccacgatcgtgcgaccatgttcctcaggtctaactccggctaaacataattgggttattgtcttgtttgtgttttaattctgatgtatatgagtgagttttctttaccatttttcagcctggagaagagccttgccccttggacccctggattgcagttccagataagagcaagtatgtggatctccagaccctcaaattgcaggaaaatcctgaggtttgttactgcattatatgtcctcgctgcgatgctatggttttctaggtttattggttatatgtccttaggatttagcaatcaccaagctgtatattacttggttaacaggatgttccaactggtgagctcccgaggaatatgctgctgtccgtagacaggcatcttgttcagaccattgttcctggaactagattaactgtaattggtatctacagtgtctaccaagcatctgcaaagtatgttggatctaaaacatctgctcagtttgtttccattttgttgagctagactacttgcatagctgatgacgctcaaatattcattttgcagccaaaagggtgctgttggagtcaaacagccttacattagagttgtggggttggagcagtcccgagatgccaactcgaatggtccctcaaattttacacttgatgaggtagattgctttgccaaaattccaagtttcttttttaagagtgttacagcatatttacaatgttaattttcttgttggtttgtaggaaatggaattcaaagaatttgcacagaggccagatgcatatgtcaagatttgctcaatgattggcccttcaatttatggccattctgatgtcaagaaagctattgcatgcttgctgtttggtggctcaaagaaggtatatttttgatcttatcagtggctaatatgtgaaaatacaaagttgtgttggatccagtggctagttggaatgagctgtaactaaactttcttctatggcagaggctaccggatggtgtccgtttgagaggggacattcatgtcttgctgctgggtgatccatcaacagcaaaatcacaggcaagtgttttttcgctattagaaatgaattatctctagtccagtgacatgaaactgtacattccaacagttcctcaagtttgtggagaagacagcgccgattgctgtctatacatctgggaaaggttcatcagcagctggtctcacagcgtcagtaattcgggacggtagctctgtaagcttgtcttccctgcaaggattattgtgtttactcaaagttctgtttcctagaactaaaagacttattttccctgtacagcgagagttttatttggaaggaggggccatggttttggctgatggtggagttgtttgtattgatgagtttgacaaaatgaggcctgaggaccggtaagcattgatctatagtcttctttctagaaactaaaataagcattgcacatgtaatttttccttactcttcaaagttgaaaccatattgagttacctttatgctgtgattccagagttgcaattcacgaagcaatggaacagcagaccatctcgattgccaaagctggcattacaacagtactcaattcaaggacctcggtactagcagctgccaatccaattgcagggcgctacgatgatcttaaggtcagtcaaagtttttattattgacttgtactattttcatattttgaaaatgtattaacagttctagccttatatgcaaggcaatcagtttgacacattttctattgctactcctcagactgcacaagataacattgatctgcagacaaccatcctttctagatttgatctaatctttattgttaaagatgtcagaatgtatgatcaagacaaggtatgacgcattattctttgtccagctcattgatgtgcttcagagactaaataaacttccaattgcagcgaattgcaagccacatcattaaggtgcatgccagtggtgctgctgcttcatccaagaatacagatgctagtgaaggagagaattggctaaaaaggtgtggttggccttctatgttctgatatacatactacacagttttgatatgatgttcttggattgtaaatgcataatcctcacatgtgtaggtacattgagtattgccgtgttacttgtaaaccacgactctcagaaaaggcagcagagatgcttcagaacaaatatgtggagattagacaggcacgtgctaaagatttttcacttagtctaactgttattaagactgttctacttatttatttttttcattgtgcagaaaatgagacaacaagctcatgaaacagggagggctgcagctatacccatcactgtgcggcagcttgaagccattatacgtttgagtgaatctcttgcaaagatgagattgtgagaatatagcattactatacatttgacatttctttttgcgagtagctcaactagcagtatatttatatcttacatttttcacatattggcttttatttccagtgggtcataacttacatgttttataatgttcctaattggcactttgaataattatcaggacaagtgtggctacaccagagcatgttgaagaggcatttaggctgttcaatgtctccactgttgatgccgcaagatctggaatcaatgagcatttgaacctatcaccagatattgcaaatgagatcaaggttaatcttcccatccaaaagtgaactgccaacttgtcaactttgttttctgaattttgttgcccattttgttccaacagcaagctgaggcacaaataaagagaaggatgggaattggaagccacatatccgagcgacgcctgatcgatgaactaaataggatggggatgaatgaatccattgtgaggaacctgtcatactatttgctatttaattaattgatttagtatcatttttcttatgctaccattcggctgcttcaggtgcgaagagcccttctgatcatgcaccaaagggatgaagtggagtacaagagagagcgccatgtcattgtccggaaggcttgaggtgaactgtggagtatttataaatcgaggacaacttctattcagactgtataaggctatgagttcactgaaactgtaatctctgggagaagacaaggacatgtttgagtttcggttgatcactgacatgaccattgtaatctgcaagagtagaagaaatgcactccgtccttgatgaaactgtagttaaactacagtattaaagatgtaactgtagtgaaaccatgtaaccagggttctgaaatggctaatgtattaaactacagtattaattcatggatataaatggctaatattctgcagtgcccagac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0797400, RefSeq:Os02g0797400