Os02g0797500

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Revision as of 02:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0797500| Description = Similar to Plastidic aspartate aminotransferase| Version = NM_001054932.1 GI:115449234 GeneID:4331017| Length = 4365...")
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Gene Name

Os02g0797500

Description

Similar to Plastidic aspartate aminotransferase

Version

NM_001054932.1 GI:115449234 GeneID:4331017

Length

4365 bp

Definition

Oryza sativa Japonica Group Os02g0797500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34828885..34833249

Sequence Coding Region

34829129..34829192,34829296..34829357,34830004..34830198,34830275..34830313,34830429..34830518
,34830648..34830756,34830861..34830970,34831202..34831345,34831427..34831593
,34832469..34832733,34832875..34833006

Expression

GEO Profiles:Os02g0797500

Genome Context

<gbrowseImage1> name=NC_008395:34828885..34833249 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34828885..34833249 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccgcccccttcgccgtctcctcctcaccggcggcttccgccgtggccgcgcgctccaaggtgttgcgaggagggaggagcgaggcgaggactggatgccgcctggggatcacgaggaagaattttggacgtgtcatgatggcccttgcagtagatgtctctcgttttgaaggagtgccgatggcccctccagacccaattctcggggtttcagaagcatttaaggcagatcaaaatgatctgaagctcaaccttggtgttggtgcctatagaacagaagagttacagccttatgtcctcaatgtggtcaagaaggctgaaactcttatgttggagaaaggagaaaacaaggagtatctgccaattgaaggcttagctgcatttaacaaagcaactgcagaactattgtttggagctgataatccagtactcaagcaaggacgtgttgctactcttcagtctctctcaggaaccgggtcgctgcgccttgctgcagcatttatacaaagatatttccctgaagcaaaagtactgatatcatctcccacttggggcaatcacaagaacattttcaatgatgcaaaggtaccttggtcagagtaccgttattacgaccccaagactgttggcttggattttgagggaatgatagctgacatacaggctgccccagatggatcttttgttctgctgcatggttgcgctcacaacccaactggaatagacccaactccggaacaatgggagaaaattgcagatgtcattcaagagaagaaacacatgcctttctttgatgttgcatatcagggttttgccagtggaagccttgatgaagatgcatcttctgtcaggctttttgttcaacggggactggaagtgtttgttgcgcagtcttatagcaaaaaccttggtttatatgcagaaagaattggagcaataaatgttgtctgctcaacacctgaagtcgcaaacagggtgaagagccagctgaaacgattggcacggcccatgtattcgaatccccctattcatggtgctaggatagttgccaacgttgttggggatccaaccatgtttggtgaatggaaacaggagatggaagaaatggcagggcgtatcaagaatgtaagacagaagctttatgatagtttgtctgcaaaggacgacagtggcaaggactggtctttcattctgaggcagataggcatgttctcctacacgggcttgaacaaaactcagagtgataatatgaccgacaaatggcacatatacatgacaaaggatgggagaatttcgttggctggattgtccctggctaaatgcgagtacctagctgacgccatcatcgactccttccataacgttagctag</cdnaseq>

Protein Sequence

<aaseq>MASAPFAVSSSPAASAVAARSKVLRGGRSEARTGCRLGITRKNF GRVMMALAVDVSRFEGVPMAPPDPILGVSEAFKADQNDLKLNLGVGAYRTEELQPYVL NVVKKAETLMLEKGENKEYLPIEGLAAFNKATAELLFGADNPVLKQGRVATLQSLSGT GSLRLAAAFIQRYFPEAKVLISSPTWGNHKNIFNDAKVPWSEYRYYDPKTVGLDFEGM IADIQAAPDGSFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKKHMPFFDVAYQGFASG SLDEDASSVRLFVQRGLEVFVAQSYSKNLGLYAERIGAINVVCSTPEVANRVKSQLKR LARPMYSNPPIHGARIVANVVGDPTMFGEWKQEMEEMAGRIKNVRQKLYDSLSAKDDS GKDWSFILRQIGMFSYTGLNKTQSDNMTDKWHIYMTKDGRISLAGLSLAKCEYLADAI IDSFHNVS</aaseq>

Gene Sequence

<dnaseqindica>245..308#412..473#1120..1314#1391..1429#1545..1634#1764..1872#1977..2086#2318..2461#2543..2709#3585..3849#3991..4122#gattctgaattttcccaggaatctgagcggccgcaaggcgtcacgcgaaacccgtccaacccaactccactccatcctctgcagccgcagttgtgacggagactccaaggccatcaccatccacccgctctcctcctcctcctcctccgcttgatccctccatctcctcgatcgatctccacactccactgcgcactgcaccagcaacgcccccccctgatccctctccacggctgcaccggagatggcttccgcccccttcgccgtctcctcctcaccggcggcttccgccgtggccgcgcgctccaaggcacgggacactcgtcttactcatcttctgtgtttggtttccttgatttggatttggattttttttttaattaactcatgccgcggttcgttggtgctcgcaggtgttgcgaggagggaggagcgaggcgaggactggatgccgcctggggatcacgaggaaggtggtcgcctgtttggattatgatttctgcctctagcttgtttagttgatggtttgttttggatggacatgggttctatcgtctatcttatctgtgatttaatagtgatactgattgcttcctccctcgattagaaattatggtttgtttggtttcactatgaatgactacctgtcagttggcactgtgatctcttttacgacaataatagtaattcacgattcaggagtttatctgctttttgggtatgatatctctgctaatttaatgctcctggagctcttctaatcagggatgggtggctcttaattaaggttttgaatccatactgtcatatgttgacacctaaaagctctttgatgtagaaaataaaatcgaaatgatatatagaaatcggttgagacttgagaacacgcagctgctgaagcatgactaattatcaagctgctaataaaatttggcgatggccttcattggaaaggcatggtgttttgatcctgtaacggaattctgatattttatgtttgttaggaactctcaactcttgagaaatataaaattgactgtatcgagatttattccatgtcaagcttcagcatatggttgtgctttggattaacatcctttcattgctattctgttgcagaattttggacgtgtcatgatggcccttgcagtagatgtctctcgttttgaaggagtgccgatggcccctccagacccaattctcggggtttcagaagcatttaaggcagatcaaaatgatctgaagctcaaccttggtgttggtgcctatagaacagaagagttacagccttatgtcctcaatgtggtcaagaaggtaagtctaataatacctatcatttccttaatataactcagttcttgttgtgacacactattcttacacgtggtaggctgaaactcttatgttggagaaaggagaaaacaaggaggtatggtgtattttccttcaaattcaagtagctggattataaggaattatttctggagttttctgtatttctgtttctgaaggttgatgacaaaattatgttttttttggtgcagtatctgccaattgaaggcttagctgcatttaacaaagcaactgcagaactattgtttggagctgataatccagtactcaagcaaggacgtgtatgtgctgtggcctatgcagctcttgctgtacttattttgtaaatactaagattttctggaatgctgctacagcgaagcatgtccttatatttagtaaacattatttaatgataattccttctgtaggttgctactcttcagtctctctcaggaaccgggtcgctgcgccttgctgcagcatttatacaaagatatttccctgaagcaaaagtactgatatcatctcccacttggggtatgtatgtgaattaatgtgcttaatctttgagcattcaacttcatttttcatagcagagtgtctcattggcaaactttgaactccaatctatattcttacaggcaatcacaagaacattttcaatgatgcaaaggtaccttggtcagagtaccgttattacgaccccaagactgttggcttggattttgagggaatgatagctgacatacaggtcgtgttttctaactcatttatattcaatactactatctgtgttttctattttaaacttgatgagcattgtttagcataactttgtcgttcaaattggcatgtatccatcatagaaatttacacctgtcacttgtctgtttactattgttaattgtcaattttctgtttactattgttaatttctatgtgttgagtattggtttgtgatattgatttgtgtgtccaataggctgccccagatggatcttttgttctgctgcatggttgcgctcacaacccaactggaatagacccaactccggaacaatgggagaaaattgcagatgtcattcaagagaagaaacacatgcctttctttgatgttgcatatcaggtgaaatgttctcactttattatttcgtttttctctgcatgaaaacaaatatcttactgactagcaaatatttctctgcagggttttgccagtggaagccttgatgaagatgcatcttctgtcaggctttttgttcaacggggactggaagtgtttgttgcgcagtcttatagcaaaaaccttggtttatatgcagaaagaattggagcaataaatgttgtctgctcaacacctgaagtcgcaaacaggtgatactttaatctgaatgattgccttcgtagtcaaattgttcgtttctatccagttattgcagcgaatgttaataatagattattctgtttagtgggtaatatggaccaacctcttattgatgtgcaaagcaacttgatttttcatggtaggttaacaagacttctaagcaaatttcatccaggcaaaaaatgttgtaaattcttggaaattagtgttatgtacagattaatagacactagtttttactccagaaaagaaaccaccagcaacaataattggtctcaacccaaacaagcaaagcactgaatttgatgttaaccataaacaaaactccacagacaagatgtatacttcaaattttctcttaaatcaacatgtggcataagaaccacagttcttgatccacttcagtggtatacaacatatccagtgtggaaaatctcatgaatactggtacatggcatttactttgctttttatataagcctgcacacacacgagagtcctaggaccacacaaggacaacttaagatttgtaacgtgagctcagatttgactagcgctagttcatctagcccgtgtgattttacaaactcggtaagaaaattaaactatataactccagtttggacaaagacaccaaaccaactcatcatagttgattttcctggttggtaacttccctccttgatcctctcttgcttatcgtgcataccatacaggcatacacagcttccatgcaaagtacatgccatgtgcaaaaatgccatcctaatgtttgcaacagttgctttgtatgaatcaatacaaaatagtactcttactgtgacactgcaaagcttatttttaactgaaattcctttccttgcagggtgaagagccagctgaaacgattggcacggcccatgtattcgaatccccctattcatggtgctaggatagttgccaacgttgttggggatccaaccatgtttggtgaatggaaacaggagatggaagaaatggcagggcgtatcaagaatgtaagacagaagctttatgatagtttgtctgcaaaggacgacagtggcaaggactggtctttcattctgaggcagataggcatgttctcctacacgggcttgaacaaaactcaggtgacatatgctttaaattttcacagataacacttccattcttctatcgactggtgatttctccatatataatgtgactgcaaacactgcaattcacacaatacactaagtattcttaatttgattcgtttgtatttgcagagtgataatatgaccgacaaatggcacatatacatgacaaaggatgggagaatttcgttggctggattgtccctggctaaatgcgagtacctagctgacgccatcatcgactccttccataacgttagctagacgaggattcaggtcactgctattgtggttaatccttcaatatgctgggatttttggttccttccagcttgagttcttagccaggattgtatatccggcgctacgtaatttggagataataatgaattttgtctgtgcaacaaactttgcatatgctttgtcgaatgtacactggcactatgttagaagcttgaaatatcgaattgaataataatgagactagcaataagccaaactaattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0797500, RefSeq:Os02g0797500